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Should sequencing depth be considered? #78

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Yunliang81 opened this issue May 30, 2023 · 2 comments
Open

Should sequencing depth be considered? #78

Yunliang81 opened this issue May 30, 2023 · 2 comments

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@Yunliang81
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It seems that the sequencing depth was not considered in the .py code. The sequencing depth could affect alpha and beta diversity. Should the sequencing depth be considered?

@matbeale
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This is a really good point - any plans to add in rarefaction options to allow for this?

@mars188
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mars188 commented Nov 13, 2023

would be great if rarefaction option is added to consider seq depth

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