make alignment free its own module and updated TOC, footer, etc.

malachig committed May 29, 2018

fix tables for real this time

ahwagner committed Nov 13, 2017

Revert "fix the navigation tables on wiki pages" This reverts commit 1c78d5acac208efcaf4c284160febd715b2ddcb0.

ahwagner committed Nov 13, 2017

fix the navigation tables on wiki pages

ahwagner committed Nov 13, 2017

fix navigation from Kallisto move

obigriffith committed Jul 11, 2017

Updated Reference Guided Transcript Assembly (markdown)

obigriffith committed Mar 18, 2017

Minor updates

malachig committed Nov 15, 2016

Minor updates

malachig committed Nov 15, 2016

update ref-guided and de-novo mode to stringtie

jasonwalker80 committed Nov 8, 2016

Update to use variables for ref-guided.

jasonwalker80 committed Nov 7, 2016

Update DE modes and Alternative Expression to use HISAT2 BAMs and simplified paths.

jasonwalker80 committed Oct 7, 2016

fix all links to cufflink manual pages

malachig committed Jun 7, 2015

Updated Reference Guided Transcript Assembly (markdown)

malachig committed Apr 27, 2015

Updated Reference Guided Transcript Assembly (markdown)

obigriffith committed Nov 18, 2014

Updated Reference Guided Transcript Assembly (markdown)

obigriffith committed Nov 18, 2014

Updated Reference Guided Transcript Assembly (markdown)

obigriffith committed Nov 18, 2014

Updated Reference Guided Transcript Assembly (markdown)

malachig committed Nov 16, 2014

Updated Reference Guided Transcript Assembly (markdown)

malachig committed Nov 16, 2014

Updated Reference Guided Transcript Assembly (markdown)

malachig committed Nov 16, 2014

Updated Reference Guided Transcript Assembly (markdown)

malachig committed Nov 16, 2014

Updated Reference Guided Transcript Assembly (markdown)

malachig committed Nov 16, 2014

add flowchart

malachig committed Nov 16, 2014

Remove redundant header syntax

jasonwalker80 committed Sep 2, 2014

Initial revision for Module2, Module3 and Module4

jasonwalker80 committed Sep 2, 2014