Add metawrap (from tools-au)

[TomHarrop]

FOR CONTRIBUTOR:

• I have read the CONTRIBUTING.md document and this tool is appropriate for the tools-iuc repo.
• License permits unrestricted use (educational + commercial)
• This PR adds a new tool or tool collection
• This PR updates an existing tool or tool collection
• This PR does something else (explain below)

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Updating metawrap and moving it across from tools-au

[TomHarrop]

This is running out of RAM

sh: line 1: 2312 Killed

[TomHarrop]

Thanks @bgruening

[bebatut]

Thanks for this tool

I have one question.

Would it be not better to have the folder as metawrap as the name of the original tool or at least the package name metawrap-mg?

[bernt-matthias]

Really nice.

[bernt-matthias]

Maybe we should provide this centraly.. https://github.com/galaxyproject/galaxy/blob/ce7ef779c96d3fa0e3ef9e60a33433c266430e87/lib/galaxy/jobs/runners/util/job_script/MEMORY_STATEMENT_TEMPLATE.sh#L2

[TomHarrop]

I'm happy to do that if you like, are the available env vars also documented somewhere central?

[bernt-matthias]

I think this would be nice. The env vars are documented here https://docs.galaxyproject.org/en/master/dev/schema.html#reserved-variables and in the linked planemo docs

[TomHarrop]

Thanks for this tool

I have one question.

Would it be not better to have the folder as metawrap as the name of the original tool or at least the package name metawrap-mg?

Thanks @bebatut, I think there is a different tool somewhere called "metawrap". Happy to change it to metawrap-mg if the hyphen doesn't affect anything (e.g. toolshed url)?

[TomHarrop]

Thanks @bernt-matthias

[bgruening]

Thanks @TomHarrop