diff --git a/tools/maxbin2/maxbin2.xml b/tools/maxbin2/maxbin2.xml index ec53eb7fb55..3a54b659f28 100644 --- a/tools/maxbin2/maxbin2.xml +++ b/tools/maxbin2/maxbin2.xml @@ -1,4 +1,4 @@ - + clusters metagenomic contigs into bins 2.2.7 @@ -41,7 +41,7 @@ echo '$identifier' >> reads_list && #else #for $i, $r in enumerate($assembly.inputs.reads) #if $r - #set $identifier = re.sub('[^\s\w\-\\.]', '_', str($r.element_identifier)) + #set $identifier = re.sub('[^\w\-\\.]', '_', str($r.element_identifier)) #set $newid = $identifier + '_' + str($i) #if $r.ext.endswith(".gz") gunzip -c '$r' > '$newid' &&