From 4e3719a2c09e11afd9069bb520de11e3a0f02c72 Mon Sep 17 00:00:00 2001
From: Hugo Lefeuvre <161316836+hugolefeuvre@users.noreply.github.com>
Date: Tue, 2 Apr 2024 15:20:09 +0200
Subject: [PATCH] Update seqkit translate (#5921)
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* Add seqkit translate

* Update tools/seqkit/seqkit_translate.xml

Change name into argument

Co-authored-by: Björn Grüning <bjoern@gruenings.eu>

* change name by argument and delete help

* Delete test file

* Change tool description and output label

---------

Co-authored-by: Björn Grüning <bjoern@gruenings.eu>
---
 tools/seqkit/seqkit_translate.xml | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/tools/seqkit/seqkit_translate.xml b/tools/seqkit/seqkit_translate.xml
index 1928ba647fa..8d640577b56 100644
--- a/tools/seqkit/seqkit_translate.xml
+++ b/tools/seqkit/seqkit_translate.xml
@@ -1,5 +1,5 @@
 <tool id="seqkit_translate" name="SeqKit translate" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@">
-    <description>Translate nucleotid sequence to protein sequence</description>
+    <description>nucleotid to protein sequence</description>
     <macros>
         <import>macros.xml</import>
     </macros>
@@ -79,7 +79,7 @@
         <param argument="--init-codon-as-M" type="boolean" truevalue="--init-codon-as-M" falsevalue="" checked="false" label="Translate initial codon at beginning to 'M'" /> 
     </inputs>
     <outputs>
-        <data name="output" format_source="input" label="${input.name} translate (${tool.name})"/>
+        <data name="output" format_source="input" label="${tool.name} on ${on_string}"/>
     </outputs>
     <tests>
         <!-- 1. fastq -->