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BRC-Analytics data #201

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nekrut opened this issue Dec 19, 2024 · 0 comments
Open

BRC-Analytics data #201

nekrut opened this issue Dec 19, 2024 · 0 comments
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@nekrut
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nekrut commented Dec 19, 2024

JSON data for initialization of BRC-Analytics site

The purpose of this dataset is to initialize the BRC-Analytics site and provide a list of accessions for creation of UCSC Browsers for genomes served via BRC-Analytics site.

Requirements

BRC-Analytics (or any other site using underlying Filament framework) allows users to:

  • access reference genome data for a set of species;
  • examine annotations for a given genome in a UCSC Browser instance;
  • run a set of predetermined IWC workflows on that reference;
  • display additional data that cannot be served by NCBI or UCSC

Spreadsheet example

https://docs.google.com/spreadsheets/d/1Gg9sw2Qw765tOx2To53XkTAn-RAMiBtqYrfItlLXXrc/edit?usp=sharing

What is needed?

  • Finalize the structure and content of the initialization data for BRC-Analytics and GA2
@nekrut nekrut converted this from a draft issue Dec 19, 2024
@nekrut nekrut moved this to Todo in BRC development tasks Dec 19, 2024
@jdavcs jdavcs moved this from Todo to In Progress in BRC development tasks Dec 20, 2024
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