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Ex: Run a workflow in Galaxy that generates a .bam output. Galaxy automatically generates a .bai file associated with this .bam to run IGV etc.
For my use case I need to download both the .bam and it's index to run IGV outside of Galaxy, but the latter doesn't seem possible after reading your documentation??? Though I could be wrong :)
I see this field returned upon a DatasetClient(<galaxy_instance>).show_dataset(<dataset_id>) but that is as far as I've got:
"meta_files": [
{
"file_type": "bam_index"
}
],
The text was updated successfully, but these errors were encountered:
Ex: Run a workflow in Galaxy that generates a
.bam
output. Galaxy automatically generates a.bai
file associated with this.bam
to run IGV etc.For my use case I need to download both the
.bam
and it's index to run IGV outside of Galaxy, but the latter doesn't seem possible after reading your documentation??? Though I could be wrong :)I see this field returned upon a
DatasetClient(<galaxy_instance>).show_dataset(<dataset_id>)
but that is as far as I've got:The text was updated successfully, but these errors were encountered: