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template_geographic_coverage EML Assembly Line seems to see more columns in a tabular file if a column contains in some cell several "word" as scientific names #92

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yvanlebras opened this issue Jan 22, 2024 · 1 comment

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@yvanlebras
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yvanlebras commented Jan 22, 2024

Maybe @PaulineSGN if you can have a look.

I have the error with this file https://ecology.usegalaxy.eu/api/datasets/4838ba20a6d86765a235a22504a5e660/display?to_ext=tabular for example.

Error message:

Error in scan(file = file, what = what, sep = sep, quote = quote, dec = dec,  : 
  line 7 did not have 7 elements
Calls: read.table -> scan
Execution halted
@PaulineSGN
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This is from the R file geo_cov_temp.R, the read.table function is missing an argument. I opened a pull request #94 . After that, I think it will be good.

yvanlebras added a commit that referenced this issue Jan 22, 2024
Update geo_cov_temp.R (answer to issue #92)
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