DESCRIPTION

Package: MsBackendRawFileReader
Type: Package
Title: Mass Spectrometry Backend for Reading Thermo Fisher Scientific raw Files
Version: 1.11.6
Authors@R: c(person(given = "Christian",
    family = "Panse", email = "cp@fgcz.ethz.ch", role = c("aut", "cre"),
    comment = c(ORCID = "0000-0003-1975-3064")),
	person(given = "Tobias", family = "Kockmann",
	  email = "Tobias.Kockmann@fgcz.ethz.ch", role = "aut", 
      comment = c(ORCID = "0000-0002-1847-885X")),
    person(given = "Roger", family = "Gine Bertomeu",
      email = "roger.gine@iispv.cat", role = "ctb",
      comment = c(ORCID = "0000-0003-0288-9619")))
Depends: R (>= 4.1), methods, Spectra (>= 1.15.10)
Imports:
    ProtGenerics (>= 1.35.3),
    MsCoreUtils,
    S4Vectors,
    IRanges,
    rawrr (>= 1.13.1),
    utils,
    BiocParallel
Suggests:
    BiocStyle (>= 2.5),
    ExperimentHub,
    MsBackendMgf,
    knitr,
    lattice,
    mzR,
    protViz (>= 0.7),
    rmarkdown,
    tartare (>= 1.5),
    testthat
Description: implements a MsBackend for the Spectra package using
  Thermo Fisher Scientific's NewRawFileReader .Net libraries.
  The package is generalizing the functionality introduced by the rawrr package
  Methods defined in this package are supposed to extend the Spectra
  Bioconductor package. 
URL: https://github.com/fgcz/MsBackendRawFileReader
BugReports: https://github.com/fgcz/MsBackendRawFileReader/issues
Encoding: UTF-8
NeedsCompilation: yes
biocViews: MassSpectrometry, Proteomics, Metabolomics
RoxygenNote: 7.3.2
License: GPL-3
SystemRequirements: mono-runtime 4.x or higher (including System.Data library)
    on Linux/macOS, .Net Framework (>= 4.5.1) on Microsoft Windows.
VignetteBuilder: knitr
Collate: 
    'hidden_aliases.R'
    'AllGenerics.R'
    'MsBackendRawFileReader-functions.R'
    'MsBackendRawFileReader.R'
    'benchmark.R'
    'zzz.R'