diff --git a/external-dev/aopo-slim.owl b/external-dev/aopo-slim.owl index 577e2a7c..b731d36d 100644 --- a/external-dev/aopo-slim.owl +++ b/external-dev/aopo-slim.owl @@ -44,7 +44,7 @@ https://raw.githubusercontent.com/jmillanacosta/aop-ontology/patch-1/aopo.owl Slimmer - 2024-04-21 19:56:01 + 2024-05-01 01:27:44 28:03:2024 12:38 chebi_ontology human_phenotype @@ -102,7 +102,7 @@ Uma Vempati, Hande Küçük, Ubbo Visser, Saminda Abeyruwan, Kunie Sakurai, Vanc 2.8.6 2.8.8 2.8.9 - 2024-04-19 + 2024-04-26 This SLIM file was generated automatically by the eNanoMapper Slimmer software library. For more information see http://github.com/enanomapper/slimmer. diff --git a/external-dev/bao-slim.owl b/external-dev/bao-slim.owl index bfa40125..44713d29 100644 --- a/external-dev/bao-slim.owl +++ b/external-dev/bao-slim.owl @@ -24,7 +24,7 @@ http://bioassayontology.org/bao/bao_complete_merged.owl Slimmer - 2024-04-21 19:56:09 + 2024-05-01 01:27:51 Contact: Stephan Schurer stephan dot schurer at gmail dot com diff --git a/external-dev/bfo-slim.owl b/external-dev/bfo-slim.owl index c69f16bc..74d4e096 100644 --- a/external-dev/bfo-slim.owl +++ b/external-dev/bfo-slim.owl @@ -45,7 +45,7 @@ http://purl.obolibrary.org/obo/bfo/classes-only.owl Slimmer - 2024-04-21 19:56:11 + 2024-05-01 01:27:53 The http://purl.obolibary.org/obo/bfo/classes-only.owl variant of BFO ("bfo_classes_only.owl") includes only the class hierarchy and annotations from the full OWL version of BFO 2: http://purl.obolibary.org/obo/bfo.owl ("bfo.owl"). There are no object properties or logical axioms that use the object properties in bfo_classes_only.owl. As the logical axioms in the bfo_classes_only.owl variant are limited to subclass and disjoint assertions they are much weaker than the logical axioms in bfo.owl. If you plan to use the relations that define BFO 2, you should import bfo.owl instead of bfo_classes_only.owl. To the extent that the relations are used without importing bfo.owl, be mindful that they should be used in a manner consistent with their use in bfo.owl. Otherwise if your ontology is imported by a another ontology that imports bfo.owl there may be inconsistencies. diff --git a/external-dev/bto-slim.owl b/external-dev/bto-slim.owl index fc71428a..1746ebb2 100644 --- a/external-dev/bto-slim.owl +++ b/external-dev/bto-slim.owl @@ -20,7 +20,7 @@ http://purl.obolibrary.org/obo/bto.owl OBO-Edit 2.3.1 Slimmer - 2024-04-21 19:56:15 + 2024-05-01 01:27:57 23:10:2021 16:56 BrendaTissueOBO 1.2 diff --git a/external-dev/ccont-slim.owl b/external-dev/ccont-slim.owl index 1179d19b..2285f9b0 100644 --- a/external-dev/ccont-slim.owl +++ b/external-dev/ccont-slim.owl @@ -15,7 +15,7 @@ https://raw.githubusercontent.com/enanomapper/ontologies/master/internal/ccont-ext.owl Matthias Ganzinger, matthias.ganzinger@med.uni-heidelberg.de Slimmer - 2024-04-21 19:56:17 + 2024-05-01 01:27:59 cell culture ontology (CCONT) 1.1 This SLIM file was generated automatically by the eNanoMapper Slimmer software library. For more information see http://github.com/enanomapper/slimmer. diff --git a/external-dev/chebi-slim.owl b/external-dev/chebi-slim.owl index 18ccb1e2..344a27fa 100644 --- a/external-dev/chebi-slim.owl +++ b/external-dev/chebi-slim.owl @@ -17,7 +17,7 @@ http://ftp.ebi.ac.uk/pub/databases/chebi/ontology/chebi_lite.obo Slimmer - 2024-04-21 19:57:54 + 2024-05-01 01:29:37 28:03:2024 12:38 chebi_ontology 1.2 diff --git a/external-dev/cheminf-slim.owl b/external-dev/cheminf-slim.owl index d528f197..b22206c1 100644 --- a/external-dev/cheminf-slim.owl +++ b/external-dev/cheminf-slim.owl @@ -80,7 +80,7 @@ http://creativecommons.org/publicdomain/zero/1.0/ http://semanticchemistry.github.io/semanticchemistry/ontology/cheminf.owl Slimmer - 2024-04-21 19:56:19 + 2024-05-01 01:28:02 An information artifact is, loosely, a dependent continuant or its bearer that is created as the result of one or more intentional processes. Examples: uniprot, the english language, the contents of this document or a printout of it, the temperature measurements from a weather balloon. For more information, see the project home page at https://github.com/information-artifact-ontology/IAO Document containing upporting external terms IDs allocated to related efforts: PNO: IAO_0020000-IAO_0020999, D_ACTS: IAO_0021000-IAO_0021999 diff --git a/external-dev/chmo-slim.owl b/external-dev/chmo-slim.owl index 1d1e356b..1b4a5dc6 100644 --- a/external-dev/chmo-slim.owl +++ b/external-dev/chmo-slim.owl @@ -19,7 +19,7 @@ http://purl.obolibrary.org/obo/chmo.owl Slimmer - 2024-04-21 19:57:59 + 2024-05-01 01:29:42 1.2 batchelorc This SLIM file was generated automatically by the eNanoMapper Slimmer software library. For more information see http://github.com/enanomapper/slimmer. diff --git a/external-dev/clo-slim.owl b/external-dev/clo-slim.owl index 019aafd8..3ac8a6c7 100644 --- a/external-dev/clo-slim.owl +++ b/external-dev/clo-slim.owl @@ -38,7 +38,7 @@ http://purl.obolibrary.org/obo/cl.owl Slimmer - 2024-04-21 19:58:10 + 2024-05-01 01:29:54 See PMID:15693950, PMID:12799354, PMID:20123131, PMID:21208450; Contact Alexander Diehl, addiehl@buffalo.edu, University at Buffalo. 2024-04-05 This SLIM file was generated automatically by the eNanoMapper Slimmer software library. For more information see http://github.com/enanomapper/slimmer. diff --git a/external-dev/efo-slim.owl b/external-dev/efo-slim.owl index e874a285..08e9cf42 100644 --- a/external-dev/efo-slim.owl +++ b/external-dev/efo-slim.owl @@ -55,7 +55,7 @@ License. www.apache.org/licenses/LICENSE-2.0 http://www.ebi.ac.uk/efo/efo.owl Slimmer - 2024-04-21 19:59:16 + 2024-05-01 01:31:51 2024-04-15 3.65.0 This SLIM file was generated automatically by the eNanoMapper Slimmer software library. For more information see http://github.com/enanomapper/slimmer. diff --git a/external-dev/envo-slim.owl b/external-dev/envo-slim.owl index b897ab45..ae39a44f 100644 --- a/external-dev/envo-slim.owl +++ b/external-dev/envo-slim.owl @@ -35,7 +35,7 @@ https://github.com/EnvironmentOntology/envo/ https://github.com/EnvironmentOntology/envo/issues/ Slimmer - 2024-04-21 19:59:22 + 2024-05-01 01:31:58 ENVO Includes Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/envo/modules/chemical_concentration.owl>) VersionIRI(<null>))) [Axioms: 679 Logical Axioms: 119] Includes Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/envo/modules/entity_attribute.owl>) VersionIRI(<null>))) [Axioms: 206 Logical Axioms: 34] diff --git a/external-dev/fabio-slim.owl b/external-dev/fabio-slim.owl index 53f7b973..1c88048c 100644 --- a/external-dev/fabio-slim.owl +++ b/external-dev/fabio-slim.owl @@ -33,7 +33,7 @@ FaBiO classes are structured according to the FRBR schema of Works, Expressions, fabio http://purl.org/spar/fabio/ Slimmer - 2024-04-21 19:59:27 + 2024-05-01 01:32:02 FaBiO, the FRBR-aligned Bibliographic Ontology, is an ontology for recording and publishing on the Semantic Web bibliographic records of scholarly endeavours. It forms part of SPAR, a suite of Semantic Publishing and Referencing Ontologies. Other SPAR ontologies are described at http://purl.org/spar/. This ontology is available at http://purl.org/spar/fabio, and uses the namespace prefix fabio. diff --git a/external-dev/go-slim.owl b/external-dev/go-slim.owl index 5fe24b4b..71417af3 100644 --- a/external-dev/go-slim.owl +++ b/external-dev/go-slim.owl @@ -24,10 +24,10 @@ http://purl.obolibrary.org/obo/go.owl Slimmer - 2024-04-21 19:59:49 + 2024-05-01 01:32:24 gene_ontology 1.2 - 2024-04-18 + 2024-04-24 This SLIM file was generated automatically by the eNanoMapper Slimmer software library. For more information see http://github.com/enanomapper/slimmer. @@ -337,20 +337,6 @@ - - - - - - - - - - - - - - diff --git a/external-dev/iao-slim.owl b/external-dev/iao-slim.owl index 4cf9c007..4dbd11c0 100644 --- a/external-dev/iao-slim.owl +++ b/external-dev/iao-slim.owl @@ -57,7 +57,7 @@ http://purl.obolibrary.org/obo/iao.owl Slimmer - 2024-04-21 19:59:51 + 2024-05-01 01:32:26 An information artifact is, loosely, a dependent continuant or its bearer that is created as the result of one or more intentional processes. Examples: uniprot, the english language, the contents of this document or a printout of it, the temperature measurements from a weather balloon. For more information, see the project home page at https://github.com/information-artifact-ontology/IAO IDs allocated to related efforts: PNO: IAO_0020000-IAO_0020999, D_ACTS: IAO_0021000-IAO_0021999 IDs allocated to subdomains of IAO. pno.owl: IAO_0020000-IAO_0020999, d-acts.owl: IAO_0021000-IAO_0021999 diff --git a/external-dev/msio-slim.owl b/external-dev/msio-slim.owl index a3941c63..8afaa239 100644 --- a/external-dev/msio-slim.owl +++ b/external-dev/msio-slim.owl @@ -181,7 +181,7 @@ http://www.cosmos-fp7.eu/WP2 Slimmer Daniel Schober 2017-10-19T10:11:26Z - 2024-04-21 20:02:43 + 2024-05-01 01:35:26 Please see the project site https://github.com/BFO-ontology/BFO, the bfo2 owl discussion group http://groups.google.com/group/bfo-owl-devel, the bfo2 discussion group http://groups.google.com/group/bfo-devel, the tracking google doc http://goo.gl/IlrEE, and the current version of the bfo2 reference http://purl.obolibrary.org/obo/bfo/dev/bfo2-reference.docx. This ontology is generated from a specification at https://github.com/BFO-ontology/BFO/tree/master/src/ontology/owl-group/specification/ and with the code that generates the OWL version in https://github.com/BFO-ontology/BFO/tree/master/src/tools/. A very early version of BFO version 2 in CLIF is at http://purl.obolibrary.org/obo/bfo/dev/bfo.clif. The BSD license on the BFO project site refers to code used to build BFO. This version (1.1.0) uses the Basic Formal Ontology (BFO) as its top level ontology. We might at some point close the resulting semantic gap by using OBI and IAO as intermediate bridges. diff --git a/external-dev/ncit-slim.owl b/external-dev/ncit-slim.owl index d7221811..8193bd3a 100644 --- a/external-dev/ncit-slim.owl +++ b/external-dev/ncit-slim.owl @@ -21,7 +21,7 @@ NCI Thesaurus OBO Edition http://purl.obolibrary.org/obo/ncit.owl Slimmer - 2024-04-21 20:01:53 + 2024-05-01 01:34:35 NCI Thesaurus, a controlled vocabulary in support of NCI administrative and scientific activities. Produced by the Enterprise Vocabulary System (EVS), a project by the NCI Center for Biomedical Informatics and Information Technology. National Cancer Institute, National Institutes of Health, Bethesda, MD 20892, U.S.A. 23.09d This SLIM file was generated automatically by the eNanoMapper Slimmer software library. For more information see http://github.com/enanomapper/slimmer. diff --git a/external-dev/npo-slim.owl b/external-dev/npo-slim.owl index 7786dda5..ad13e518 100644 --- a/external-dev/npo-slim.owl +++ b/external-dev/npo-slim.owl @@ -17,7 +17,7 @@ http://purl.bioontology.org/ontology/npo https://raw.githubusercontent.com/enanomapper/npo/master/npo-inferred.owl Slimmer - 2024-04-21 20:01:56 + 2024-05-01 01:34:39 Inferred version created with Pellet reasoner in Protege editor (v. 4.1) The NPO was primarily developed by Dennis G. Thomas in collaboration with Nathan A. Baker and Rohit V. Pappu. This development was supported by the NIH through grants U54 CA119342 and U54 HG004028. 2013-05-31 (yyyy-mm-dd) diff --git a/external-dev/oae-slim.owl b/external-dev/oae-slim.owl index c934b050..c6edb675 100644 --- a/external-dev/oae-slim.owl +++ b/external-dev/oae-slim.owl @@ -58,7 +58,7 @@ OAE: Ontology of Adverse Events http://purl.obolibrary.org/obo/oae.owl Slimmer - 2024-04-21 20:02:03 + 2024-05-01 01:34:45 1.2.47 This SLIM file was generated automatically by the eNanoMapper Slimmer software library. For more information see http://github.com/enanomapper/slimmer. diff --git a/external-dev/obcs-slim.owl b/external-dev/obcs-slim.owl index 4bf146b9..e1e4af96 100644 --- a/external-dev/obcs-slim.owl +++ b/external-dev/obcs-slim.owl @@ -37,7 +37,7 @@ http://purl.obolibrary.org/obo/obcs.owl Slimmer - 2024-04-21 20:02:07 + 2024-05-01 01:34:49 2023-12-08 This SLIM file was generated automatically by the eNanoMapper Slimmer software library. For more information see http://github.com/enanomapper/slimmer. diff --git a/external-dev/obi-slim.owl b/external-dev/obi-slim.owl index a23e6f5f..f0bbe671 100644 --- a/external-dev/obi-slim.owl +++ b/external-dev/obi-slim.owl @@ -82,7 +82,7 @@ Ontology for Biomedical Investigations http://purl.obolibrary.org/obo/obi.owl Slimmer - 2024-04-21 20:02:11 + 2024-05-01 01:34:54 Please cite the OBI consortium http://purl.obolibrary.org/obo/obi where traditional citation is called for. However it is adequate that individual terms be attributed simply by use of the identifying PURL for the term, in projects that refer to them. 2024-01-09 This SLIM file was generated automatically by the eNanoMapper Slimmer software library. For more information see http://github.com/enanomapper/slimmer. diff --git a/external-dev/pato-slim.owl b/external-dev/pato-slim.owl index f0531ed1..1ec7a6d4 100644 --- a/external-dev/pato-slim.owl +++ b/external-dev/pato-slim.owl @@ -39,7 +39,7 @@ http://purl.obolibrary.org/obo/pato.owl Slimmer - 2024-04-21 20:02:19 + 2024-05-01 01:35:01 quality 1.2 2024-03-28 diff --git a/external-dev/sio-slim.owl b/external-dev/sio-slim.owl index 9906b4d8..34909e6c 100644 --- a/external-dev/sio-slim.owl +++ b/external-dev/sio-slim.owl @@ -80,7 +80,7 @@ mailing list: http://groups.google.com/group/sio-ontology role chains: 'has capability' o 'is realized in' -> 'is participant in' Slimmer - 2024-04-21 20:02:21 + 2024-05-01 01:35:04 http://sio.semanticscience.org 1.59 This SLIM file was generated automatically by the eNanoMapper Slimmer software library. For more information see http://github.com/enanomapper/slimmer. diff --git a/external-dev/uberon-slim.owl b/external-dev/uberon-slim.owl index 1b3a7d3d..186814ac 100644 --- a/external-dev/uberon-slim.owl +++ b/external-dev/uberon-slim.owl @@ -159,7 +159,7 @@ https://github.com/obophenotype/uberon/issues/ https://lists.sourceforge.net/lists/listinfo/obo-anatomy Slimmer - 2024-04-21 20:02:38 + 2024-05-01 01:35:21 uberon 1.2 AEO diff --git a/external-dev/uo-slim.owl b/external-dev/uo-slim.owl index 44d9a83b..01f3a857 100644 --- a/external-dev/uo-slim.owl +++ b/external-dev/uo-slim.owl @@ -12,7 +12,7 @@ http://purl.obolibrary.org/obo/uo.owl Slimmer - 2024-04-21 20:02:40 + 2024-05-01 01:35:23 2023-05-25 This SLIM file was generated automatically by the eNanoMapper Slimmer software library. For more information see http://github.com/enanomapper/slimmer.