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General caching system for rule-based simulations #210

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kaizu opened this issue Nov 10, 2017 · 0 comments
Open

General caching system for rule-based simulations #210

kaizu opened this issue Nov 10, 2017 · 0 comments
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enhancement optimization refactoring
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nice to have

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@kaizu
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kaizu commented Nov 10, 2017

In gillespie, each ReactionRuleEvent caches the number of molecules specified with Species rules (e.g. the following link). This should be done rather in Space.

https://github.com/ecell/ecell4/blob/master/ecell4/gillespie/GillespieSimulator.hpp#L226-L306
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