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NEWS.md

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  • v0.4.0
    • New interface to allow an easier changeover of tree, node and branch types
    • Defaults to polytomies
  • v0.3.3
    • Enable plotting
  • v0.3.2
    • RCall interface now up and running with 1.0.
  • v0.3.1
    • Working with Julia 0.7 and 1.0!
  • v0.3
    • Allow polytomies
    • Allow TreeSets containing multiple trees
    • Add in parsenexus() to parse nexus tree files with one or more trees
    • Switch Void to Nothing and add Compat for Julia 0.6
  • v0.2.1
    • Remove use of Nullable, replace with Union{T, Void}
    • Add in package manager for 0.7
  • v0.2.0
    • Add in parsenewick() to parse newick trees using Tokenize
    • Rename iterator and filter functions to nodeiter(), branchnamefilter(), etc and use function first ordering to allow do block.
    • Major bugfixes and addition of extensive testing of code.
  • v0.1.3
    • show() now working for trees again
    • Now provides implementation of getparent(), getancestors(), getchildren(), getdescendants()
    • update docs
  • v0.1.2
    • @rput and @rget now work with new RCall RClass interface
    • Can generate random ultrametric trees (using Ultrametric)
    • Can translate and generate BinaryTrees of any kind where data types have default constructors, not just NamedTrees
    • various bugfixes in interfaces
  • v0.1.1
    • R <-> Julia interface
    • OrderedDict means tips remain in order originally presented
  • v0.1.0
    • Initial release