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levels in 'seqnames' with no entries in 'seqinfo' were dropped #21

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suderiss opened this issue Feb 5, 2023 · 0 comments

suderiss commented Feb 5, 2023

I am having this problem in example data :)

Error in makeGRangesFromDataFrame(., seqinfo = genomeinfo, keep.extra.columns = T) :                                      
  The "start" and/or "end" columns contain NAs. Use 'na.rm=TRUE' to ignore the
  rows with NAs.
In addition: Warning message:
In .normarg_seqnames2(seqnames, seqinfo) :
  levels in 'seqnames' with no entries in 'seqinfo' were dropped

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