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Mitosis Segmentation

Dataset

The dataset used is available in this post.

The dataset consist of 311 images of size 2,000 x 2,000 @40x selected from 12 breast cancer (BCa) patients. In total there are 550 mitosic centers expertly identified using a focal microscope.

This sample model is trained on br_masks for demonstration purpose to try to understand how to test models in caMicroscope.

Preprocessing

Pixel values are normalized between 0-1.

Model

U-net: 256 -> 128 -> 64 -> 32 -> 16 -> 32 -> 64 -> 128 -> 256.

Input image size: 256 x 256 x 3