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too long sequence ? #108

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Xoey0314 opened this issue Jan 10, 2025 · 1 comment
Open

too long sequence ? #108

Xoey0314 opened this issue Jan 10, 2025 · 1 comment

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@Xoey0314
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Hi,
When i use yahs, it report this erro:

[I::main] dump hic links (BAM) to binary file yahs.out.bin
[E::make_sdict_from_index] >4G sequence chunks are not supported: ^Q [94084635979840]

What should i do to resolve this erro ?

Best wishes,
Xoey

@c-zhou
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c-zhou commented Jan 13, 2025

Hello Xoey,

Your contig index file (${contig.fa}.fai) generated by samtools faidx might be corrupted. Please check the file first, and feel free to upload it here if you would like me to take a look.

Best,
Chenxi

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