From 307b16a97e223b496182f3e516f405cb0fc7d75c Mon Sep 17 00:00:00 2001
From: Kimberly Meechan <24316371+K-Meech@users.noreply.github.com>
Date: Mon, 15 Apr 2024 11:27:09 +0100
Subject: [PATCH 1/2] import header from brainglobe-utils

---
 brainreg/napari/register.py | 18 ++++++++++++++++++
 pyproject.toml              |  2 +-
 2 files changed, 19 insertions(+), 1 deletion(-)

diff --git a/brainreg/napari/register.py b/brainreg/napari/register.py
index c780bdc..7e97ed3 100644
--- a/brainreg/napari/register.py
+++ b/brainreg/napari/register.py
@@ -13,11 +13,13 @@
 from brainglobe_napari_io.brainmapper.brainmapper_reader_dir import (
     load_registration,
 )
+from brainglobe_utils.qtpy.logo import header_widget
 from fancylog import fancylog
 from magicgui import magicgui
 from napari._qt.qthreading import thread_worker
 from napari.types import LayerDataTuple
 from napari.utils.notifications import show_info
+from PyQt5.QtWidgets import QScrollArea
 
 import brainreg as program_for_log
 from brainreg.core.backend.niftyreg.run import run_niftyreg
@@ -218,6 +220,7 @@ def brainreg_register():
         check_orientation_button=dict(
             widget_type="PushButton", text="Check orientation"
         ),
+        scrollable=True,
     )
     def widget(
         viewer: napari.Viewer,
@@ -594,4 +597,19 @@ def check_orientation(event=None):
             scale=[s1, s2],
         )
 
+    widget.native.layout().insertWidget(
+        0,
+        header_widget(
+            "brainreg",
+            "Automated 3D brain registration",
+            tutorial_file_name="tutorial-whole-brain-registration.html",
+            citation_doi="https://doi.org/10.1038/s41598-021-04676-9",
+            help_text="For help, hover the cursor over each parameter.",
+        ),
+    )
+
+    scroll = QScrollArea()
+    scroll.setWidget(widget._widget._qwidget)
+    widget._widget._qwidget = scroll
+
     return widget
diff --git a/pyproject.toml b/pyproject.toml
index 1cc8d0b..a82ca4e 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -21,7 +21,7 @@ requires-python = ">=3.9"
 dependencies = [
     "brainglobe-atlasapi>=2.0.1",
     "brainglobe-space>=1.0.0",
-    "brainglobe-utils>=0.4.2",
+    "brainglobe-utils>=0.4.3",
     "fancylog",
     "numpy",
     "scikit-image",

From 76b3eb5aac06e21d178783a0aeaae5435be3b953 Mon Sep 17 00:00:00 2001
From: Kimberly Meechan <24316371+K-Meech@users.noreply.github.com>
Date: Mon, 15 Apr 2024 11:43:26 +0100
Subject: [PATCH 2/2] fix scroll area import

---
 brainreg/napari/register.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/brainreg/napari/register.py b/brainreg/napari/register.py
index 7e97ed3..448a440 100644
--- a/brainreg/napari/register.py
+++ b/brainreg/napari/register.py
@@ -19,7 +19,7 @@
 from napari._qt.qthreading import thread_worker
 from napari.types import LayerDataTuple
 from napari.utils.notifications import show_info
-from PyQt5.QtWidgets import QScrollArea
+from qtpy.QtWidgets import QScrollArea
 
 import brainreg as program_for_log
 from brainreg.core.backend.niftyreg.run import run_niftyreg