From ccf1144b6a3a89d5a0071e7ccf245379f9189c4b Mon Sep 17 00:00:00 2001 From: Yasset Perez-Riverol Date: Mon, 2 Oct 2023 15:50:14 +0100 Subject: [PATCH] update small things --- docs/feature.rst | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/docs/feature.rst b/docs/feature.rst index fd71f46..8ed07ff 100644 --- a/docs/feature.rst +++ b/docs/feature.rst @@ -27,11 +27,11 @@ Peptide properties and columns: - ``sequence``: The peptide’s sequence corresponding to the feature, this peptide sequence do not includes posttraslational modifications -> ``string`` - ``unique``: Indicates whether the peptide sequence is unique for this protein in respect to the searched database -> ``boolean (0/1)`` - ``modifications``: A list of modifications for a give peptide ``[modification1, modification2, ...]``. A modification should be - recorded as string like :ref:`introduction#modifications` -> ``list[string]`` + recorded as string like :doc:`introduction#modifications` -> ``list[string]`` - ``charge``: The charge assigned by the search engine/software -> ``integer`` - ``calc_mass_to_charge``: The PSM’s calculated (theoretical) mass to charge (m/z) -> ``double`` - ``exp_mass_to_charge``: The PSM’s experimental mass to charge (m/z) -> ``double`` -- ``peptidoform``: Peptidoform of the PSM. See more `documentation here `__. -> ``string`` +- ``peptidoform``: Peptidoform of the PSM. See more :doc:`introduction#peptidoform` -> ``string`` - ``posterior_error_probability``: Posterior Error Probability score from quantms -> ``double`` - ``global_qvalue``: Global q-value for the feature for the peptide identification in the experiment -> ``double`` - ``is_decoy``: Indicates whether the peptide sequence (coming from the PSM) is decoy -> ``boolean (0/1)``