setup.py

"""
    patric_tools: A Python package to download data from the PATRIC database
    Copyright (C) 2017 Alexandre Drouin
    This program is free software: you can redistribute it and/or modify
    it under the terms of the GNU General Public License as published by
    the Free Software Foundation, either version 3 of the License, or
    (at your option) any later version.
    This program is distributed in the hope that it will be useful,
    but WITHOUT ANY WARRANTY; without even the implied warranty of
    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
    GNU General Public License for more details.
    You should have received a copy of the GNU General Public License
    along with this program.  If not, see <http://www.gnu.org/licenses/>.

"""
from setuptools import setup, find_packages
from codecs import open
from os import path

here = path.abspath(path.dirname(__file__))

# Get the long description from the README file
with open(path.join(here, 'README.md'), encoding='utf-8') as f:
    long_description = f.read()

setup(
    name='PATRIC Tools',
    version='1.1.0',

    description='A Python package to interact with the PATRIC database (https://www.patricbrc.org)',
    long_description=long_description,

    url='https://github.com/aldro61/patric_tools',

    # Author details
    author='Alexandre Drouin',
    author_email='aldro61@gmail.com',

    # Choose your license
    license='GPLv3',

    # See https://pypi.python.org/pypi?%3Aaction=list_classifiers
    classifiers=[
        # Indicate who your project is intended for
        'Intended Audience :: Developers',
        'Intended Audience :: Science/Research'

        # Pick your license as you wish (should match "license" above)
        'License :: OSI Approved :: GNU General Public License v3 (GPLv3)',

        # Specify the Python versions you support here. In particular, ensure
        # that you indicate whether you support Python 2, Python 3 or both.
        'Programming Language :: Python :: 2',
        'Programming Language :: Python :: 3',

        'Topic :: Scientific/Engineering :: Bio-Informatics'
    ],

    # What does your project relate to?
    keywords='patric bioinformatics antibiotic antimicrobial resistance genomics database',

    packages=find_packages(),

    # List run-time dependencies here.  These will be installed by pip when your project is installed.
    install_requires=['numpy', 'pandas'],

    # List additional groups of dependencies here (e.g. development
    # dependencies). You can install these using the following syntax,
    # for example:
    # $ pip install -e .[dev,test]
    extras_require={},

    # If there are data files included in your packages that need to be
    # installed, specify them here.  If using Python 2.6 or less, then these
    # have to be included in MANIFEST.in as well.
    package_data={},

    # Although 'package_data' is the preferred approach, in some case you may
    # need to place data files outside of your packages. See:
    # http://docs.python.org/3.4/distutils/setupscript.html#installing-additional-files # noqa
    # In this case, 'data_file' will be installed into '<sys.prefix>/my_data'
    data_files=[],

    # To provide executable scripts, use entry points in preference to the
    # "scripts" keyword. Entry points provide cross-platform support and allow
    # pip to create the appropriate form of executable for the target platform.
    entry_points={},

    # Package unit tests
    test_suite='nose.collector',
    tests_require=['nose']
)