You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
Hi. When we are trying to generate a Darts_DNN prediction using the code Darts_DNN predict -i A5SS.darts_bht.flat.txt -e RBP_tpm.txt -o pred1.0.txt -t A5SS
we got the error message: raise ValueError("Only one class present in y_true. ROC AUC score ValueError: Only one class present in y_true. ROC AUC score is not defined in that case.
Here are a few lines from our A5SS.darts_bht.flat.txt file. The RBP file we used was from your test_data. ID I1 S1 I2 S2 inc_len skp_len psi1 psi2 delta.mle post_pr chr1:-:109280776:109281251:109281107:109281251:109280395:109280489 5 0 80 1 198 99 1 0.976 -0.0244 0.3573 chr1:-:11077329:11077443:11077364:11077443:11076841:11076948 0 7 0 83 133 99 0 0 0 0.272 chr1:-:112705052:112705168:112705099:112705168:112703643:112703806 4 22 41 135 145 99 0.11 0.172 0.0613 0.2007 chr1:-:11676808:11676948:11676847:11676948:11676045:11676140 1 19 2 411 137 99 0.037 0.004 -0.0331 0.158 chr1:-:1204033:1204236:1204054:1204236:1203843:1203968 1 0 2 0 119 99 1 1 0 0.452 chr1:-:1267732:1267992:1267861:1267992:1263345:1263386 2 9 6 84 198 99 0.1 0.034 -0.0655 0.2767 chr1:-:1273498:1273837:1273665:1273837:1267861:1267992 0 11 0 63 198 99 0 0 0 0.142 chr1:-:1339286:1339439:1339361:1339439:1338521:1338653 5 6 71 123 173 99 0.323 0.248 -0.0746 0.2887 chr1:-:1339286:1339649:1339581:1339649:1338521:1338653 5 0 59 5 198 99 1 0.855 -0.1449 0.4453 chr1:-:1392678:1392803:1392789:1392803:1390765:1390865 7 0 63 1 198 99 1 0.969 -0.0308 0.3213
We followed the instruction in Darts_BHT when generating the A5SS.darts_bht.flat.txt file. Could you please tell us what is wrong and how this problem could be fixed?
The text was updated successfully, but these errors were encountered:
Hi. When we are trying to generate a Darts_DNN prediction using the code
Darts_DNN predict -i A5SS.darts_bht.flat.txt -e RBP_tpm.txt -o pred1.0.txt -t A5SS
we got the error message:
raise ValueError("Only one class present in y_true. ROC AUC score ValueError: Only one class present in y_true. ROC AUC score is not defined in that case.
Here are a few lines from our A5SS.darts_bht.flat.txt file. The RBP file we used was from your test_data.
ID I1 S1 I2 S2 inc_len skp_len psi1 psi2 delta.mle post_pr chr1:-:109280776:109281251:109281107:109281251:109280395:109280489 5 0 80 1 198 99 1 0.976 -0.0244 0.3573 chr1:-:11077329:11077443:11077364:11077443:11076841:11076948 0 7 0 83 133 99 0 0 0 0.272 chr1:-:112705052:112705168:112705099:112705168:112703643:112703806 4 22 41 135 145 99 0.11 0.172 0.0613 0.2007 chr1:-:11676808:11676948:11676847:11676948:11676045:11676140 1 19 2 411 137 99 0.037 0.004 -0.0331 0.158 chr1:-:1204033:1204236:1204054:1204236:1203843:1203968 1 0 2 0 119 99 1 1 0 0.452 chr1:-:1267732:1267992:1267861:1267992:1263345:1263386 2 9 6 84 198 99 0.1 0.034 -0.0655 0.2767 chr1:-:1273498:1273837:1273665:1273837:1267861:1267992 0 11 0 63 198 99 0 0 0 0.142 chr1:-:1339286:1339439:1339361:1339439:1338521:1338653 5 6 71 123 173 99 0.323 0.248 -0.0746 0.2887 chr1:-:1339286:1339649:1339581:1339649:1338521:1338653 5 0 59 5 198 99 1 0.855 -0.1449 0.4453 chr1:-:1392678:1392803:1392789:1392803:1390765:1390865 7 0 63 1 198 99 1 0.969 -0.0308 0.3213
We followed the instruction in Darts_BHT when generating the A5SS.darts_bht.flat.txt file. Could you please tell us what is wrong and how this problem could be fixed?
The text was updated successfully, but these errors were encountered: