From 1d92fc8b614dd1e524beb2c9a2359f5d044e06d4 Mon Sep 17 00:00:00 2001 From: ben stear Date: Mon, 30 Oct 2023 09:30:55 -0400 Subject: [PATCH] Update README.md --- figures/publication_figures/README.md | 13 +++++++++++++ 1 file changed, 13 insertions(+) diff --git a/figures/publication_figures/README.md b/figures/publication_figures/README.md index a6982f8..1144933 100644 --- a/figures/publication_figures/README.md +++ b/figures/publication_figures/README.md @@ -13,3 +13,16 @@ match (o)-[r3]-(p:Concept)-[:CODE]-(hgnc_code:Code {SAB:'HGNC'}) match (p)-[r4]-(q:Concept)-[:CODE]-(eqtl:Code {SAB:'GTEXEQTL'}) RETURN * LIMIT 1 ``` + + +## remake of figure 10 (w/o) RO codes as edge names +## whats up w/ the cl-log2fcbins relationship? +```cypher +match (asd:Concept)-[:CODE]-(asd_code:Code {SAB:'MP'})//,CodeID:'MP:0010403'}) +match (asd)-[:isa]-(opsd:Concept)-[:CODE]-(opsd_code:Code {SAB:'HPO'})//CodeID:'MP:0010404'})//-[r0]-(pt:Term) where pt.name contains 'Flna' +match (opsd)-[:involved_in]-(hcop:Concept)-[:CODE]-(hcop_code:Code {SAB:'HCOP'}) +match (hcop)-[r]-(hgnc:Concept)-[:CODE]-(hgnc_code:Code {SAB:'HGNC'})//-[]-(T:Term) +match (hgnc)-[r1 {SAB:'HMAZ'}]-(cl:Concept)-[:CODE]-(cl_code:Code {SAB:'CL'}) + match (cl)-[r2]-(c:Concept)-[:CODE]-(cc:Code {SAB:'LOG2FCBINS'}) +RETURN * LIMIT 1 +```