From 2d3e94fab064bbf558bbff452d2d3478c5537737 Mon Sep 17 00:00:00 2001
From: Erich Bremer <erich@ebremer.com>
Date: Wed, 11 Nov 2020 09:49:31 -0500
Subject: [PATCH] Update convert_heatmaps.js

fix delimiter for csv and uuencode path parameters to PathDB
---
 convert_heatmaps.js | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/convert_heatmaps.js b/convert_heatmaps.js
index 770697f..76389e4 100644
--- a/convert_heatmaps.js
+++ b/convert_heatmaps.js
@@ -73,7 +73,7 @@ url = clio.host;
 const fileTemps = {};
 var manifest = [];
 const mfData = []
-manifest = fs.readFileSync(inputFolder + '/' + clio.manifest).toString().split('\n');
+manifest = fs.readFileSync(inputFolder + '/' + clio.manifest).toString().split('\r\n');
 
 console.log('Reading manifest file.');
 
@@ -163,7 +163,7 @@ function convert(filename,metadata){
     var options = {
       host: url,
       port: 80,
-      path: '/idlookup/' + clio.collection + '/' + study_id + '/' + subject_id + '/' + image_id + '?_format=json',
+      path: encodeURI('/idlookup/' + clio.collection + '/' + study_id + '/' + subject_id + '/' + image_id + '?_format=json'),
       // authentication headers
       headers: {
         // Authorization: 'Basic <calculated key>',