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Throwing multiple errors while testing OpenGene package in Julia #22

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land-mine opened this issue Nov 21, 2019 · 1 comment
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@land-mine
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land-mine commented Nov 21, 2019

loaded Package in Julia Version 1.0.4:
(v1.0) pkg> add https://github.com/OpenGene/OpenGene.jl
and it throws multiple errors while:
(v1.0) pkg> test OpenGene
ERROR: LoadError: LoadError: LoadError: LoadError: syntax: extra token "Sequence" after end of expression
Stacktrace:
[1] include at ./boot.jl:317 [inlined]
[2] include_relative(::Module, ::String) at ./loading.jl:1044
[3] include at ./sysimg.jl:29 [inlined]
[4] include(::String) at /home/jagadeesh/.julia/packages/OpenGene/J7ubl/src/OpenGene.jl:1
[5] top-level scope at none:0
[6] include at ./boot.jl:317 [inlined]
[7] include_relative(::Module, ::String) at ./loading.jl:1044
[8] include at ./sysimg.jl:29 [inlined]
[9] include(::String) at /home/jagadeesh/.julia/packages/OpenGene/J7ubl/src/OpenGene.jl:1
[10] top-level scope at none:0
[11] include at ./boot.jl:317 [inlined]
[12] include_relative(::Module, ::String) at ./loading.jl:1044
[13] include at ./sysimg.jl:29 [inlined]
[14] include(::String) at /home/jagadeesh/.julia/packages/OpenGene/J7ubl/src/OpenGene.jl:1
[15] top-level scope at none:0
[16] include at ./boot.jl:317 [inlined]
[17] include_relative(::Module, ::String) at ./loading.jl:1044
[18] include(::Module, ::String) at ./sysimg.jl:29
[19] top-level scope at none:2
[20] eval at ./boot.jl:319 [inlined]
[21] eval(::Expr) at ./client.jl:393
[22] top-level scope at ./none:3
in expression starting at /home/jagadeesh/.julia/packages/OpenGene/J7ubl/src/Base/Types/sequence.jl:10
in expression starting at /home/jagadeesh/.julia/packages/OpenGene/J7ubl/src/Base/Types/Types.jl:74
in expression starting at /home/jagadeesh/.julia/packages/OpenGene/J7ubl/src/Base/Base.jl:5
in expression starting at /home/jagadeesh/.julia/packages/OpenGene/J7ubl/src/OpenGene.jl:15
ERROR: LoadError: Failed to precompile OpenGene [647f90c1-ef53-5e39-9970-8147cb8e69f9] to /home/jagadeesh/.julia/compiled/v1.0/OpenGene/qsi3c.ji.
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compilecache(::Base.PkgId, ::String) at ./loading.jl:1203
[3] _require(::Base.PkgId) at ./loading.jl:960
[4] require(::Base.PkgId) at ./loading.jl:858
[5] require(::Module, ::Symbol) at ./loading.jl:853
[6] include at ./boot.jl:317 [inlined]
[7] include_relative(::Module, ::String) at ./loading.jl:1044
[8] include(::Module, ::String) at ./sysimg.jl:29
[9] include(::String) at ./client.jl:392
[10] top-level scope at none:0
in expression starting at /home/jagadeesh/.julia/packages/OpenGene/J7ubl/test/runtests.jl:1
ERROR: Package OpenGene errored during testing

help to solve this error and thanks in advance

@congpeifei
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hi, had you finishied it? I had the same problem

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