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params-sim-run.json should be generated in the following steps.
Execute python -m circa.experiment generate to generate the simulation data.
Execute python -m circa.experiment tune to explore parameter combinations.
You can insert --max-workers 16 before tune to enable multi-processing. 16 can be replaced with other positive integers, e.g., the number of CPU cores.
--model-params params-sim-tune.json stated in README.md is also optional, which is used to filtered out some parameter combinations.
Execute Rscript img/draw.sim.R to produce summaries under img/output.
This command may end with a file-not-found error, as other simulation experiments have not been conducted.
Only the content in img/output/best-sim-tuning.tex is in need now.
Execute python -m circa.experiment params > params-sim-run.json to create a parameter template.
Edit params-sim-run.json (generated in the Step 4) according to img/output/best-sim-tuning.tex (generated in the Step 3).
For each Method in img/output/best-sim-tuning.tex, choose the row with the highest AC.5. The related parameters can be found in the name column.
For example, in my previous run, name of the SPOT instance with the highest AC.5 is Empty-SPOT\_p0.01. Hence, in params-sim-run.json, only 0.01 in the spot.risk list is reserved and other options (0.001 and 0.0001) are removed.
All the graph parameters are neglected in the simulation study. As for a real-world dataset, the leading component in name before the first dash (-) is for the graph. For example, PC\_gauss\_a0.5 means,
only pc_gauss is used,
choose 0.5 for alpha, and
max_conds_dim is unlimited with null in the json file.
Our experiment results can be found in figshare.
In circa.zip, you can find all four param-*.json we used.
How to generate file params-sim-run.json?
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