docker-compose.yml

version: "3.8"

services:
  web:
    build:
      context: ./
      dockerfile: Dockerfile
    # image: nfdi4chem/nmrkit:dev-latest
    container_name: nmrkit-api
    volumes:
      - ./app:/code/app
      - "/var/run/docker.sock:/var/run/docker.sock"
      - shared-data:/shared
    ports:
      - "80:80"
    healthcheck:
      test:
        [
          "CMD",
          "curl",
          "-f",
          "http://localhost:80/latest/ping"
        ]
      interval: 1m30s
      timeout: 10s
      retries: 20
      start_period: 60s
    env_file:
      - ./.env
  nmr-load-save:
    build: ./app/scripts/nmr-cli
    entrypoint: /bin/sh
    stdin_open: true
    tty: true
    container_name: nmr-converter
  nmr-respredict:
    build: ./app/scripts/nmr-respredict
    entrypoint: /bin/sh
    stdin_open: true
    tty: true
    container_name: nmr-respredict
    volumes:
      - shared-data:/shared
  prometheus:
    image: prom/prometheus
    container_name: nmrkit_prometheus
    ports:
      - 9090:9090
    volumes:
      - ./prometheus_data/prometheus.yml:/etc/prometheus/prometheus.yml
    command:
      - '--config.file=/etc/prometheus/prometheus.yml'
  grafana:
    image: grafana/grafana
    container_name: nmrkit_grafana
    ports:
      - 3000:3000
    volumes:
      - grafana_data:/var/lib/grafana
  redis:
    image: "redis:alpine"
    ports:
      - "${FORWARD_REDIS_PORT:-6379}:6379"
    volumes:
      - "redis:/data"
    networks:
      - default
    healthcheck:
      test: [ "CMD", "redis-cli", "ping" ]
      retries: 3
      timeout: 5s
  pgsql:
    image: "informaticsmatters/rdkit-cartridge-debian"
    ports:
      - "${FORWARD_DB_PORT:-5432}:5432"
    env_file:
      - ./.env
    volumes:
      - "pgsql:/var/lib/postgresql/data"
    networks:
      - default
    healthcheck:
      test:
        [
          "CMD",
          "pg_isready",
          "-q",
          "-d",
          "${POSTGRES_DB}",
          "-U",
          "${POSTGRES_USER}"
        ]
      retries: 3
      timeout: 5s
  minio:
    image: 'minio/minio:latest'
    ports:
      - '${FORWARD_MINIO_PORT:-9001}:9001'
      - '${FORWARD_MINIO_CONSOLE_PORT:-8900}:8900'
    environment:
      MINIO_ROOT_USER: 'sail'
      MINIO_ROOT_PASSWORD: 'password'
    volumes:
      - 'minio:/data/minio'
    networks:
      - default
    command: minio server /data/minio --console-address ":8900"
    healthcheck:
      test:
        [
          "CMD",
          "curl",
          "-f",
          "http://localhost:9001/minio/health/live"
        ]
      retries: 3
      timeout: 5s
volumes:
  prometheus_data:
    driver: local
    driver_opts:
      o: bind
      type: none
      device: ./prometheus_data
  grafana_data:
    driver: local
    driver_opts:
      o: bind
      type: none
      device: ./grafana_data
  redis:
    driver: local
  minio:
    driver: local
  pgsql:
    driver: local
  shared-data:
networks:
  default:
    name: nmrkit_vpc