diff --git a/src/box_model.py b/src/box_model.py index 50b7c499..2e93cc5f 100644 --- a/src/box_model.py +++ b/src/box_model.py @@ -57,18 +57,16 @@ def add_evolving_condition(self, time_point, conditions): def generateConfig(self): """ - TODO: Generate configuration JSON for the box model simulation. + Generate configuration JSON for the box model simulation. + + Returns: + tuple: A tuple containing the species configuration JSON and the reaction configuration JSON. """ - # TODO: Implement the logic to generate configuration files. - # This method is a placeholder, and the actual implementation is required. speciesConfig = self.generateSpeciesConfig() - print(speciesConfig) - reactionConfig = self.generateReactionConfig() - print(reactionConfig) - pass + return speciesConfig, reactionConfig def generateSpeciesConfig(self): """ @@ -186,4 +184,13 @@ def generateReactionConfig(self): } return json.dumps(reactionsJson) + + def solve(self): + """ + TODO: Solve the box model simulation. + """ + # TODO: Implement the logic to solve the box model simulation. + # Update the internal state of the BoxModel instance to reflect the simulation results. + pass +