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More unusual shapes #144

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JakubChecinski opened this issue Jun 21, 2018 · 6 comments
Open

More unusual shapes #144

JakubChecinski opened this issue Jun 21, 2018 · 6 comments
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@JakubChecinski
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JakubChecinski commented Jun 21, 2018

#129 is back and worse.

Indicate the dataset
A single file from 0200 nm

To Reproduce
Steps to reproduce the behavior:

  1. Load data
  2. Add all three 3D Widgets with maximal decimation, no normalization and hyper contrast on (other options unchanged)

Screenshots
https://imgur.com/yEyeT03

Edit:
widget 1 -> 3D Vector
widget 2 -> 3D Arrows
widget 3 -> 3D Cubic

@JakubChecinski
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https://imgur.com/mzNoUxl

Left column -> cubic
Right column -> vector
Upper row -> maximal decimation, other options unchanged
Bottom row -> normalization disabled, other options unchanged

@JakubChecinski
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Update: 3D Arrows disappear due to normalization disabled, both decimation and hypercontrast alone work fine.

@LemurPwned
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If normalization is off, vectors are not normalized hence these weird lengths - I have left it in case someone needed that information although I don't know why.
It seems that Cubic glitches are machine-specific, I can't reproduce them on any OS (Linux or Windows)

@LemurPwned LemurPwned added this to the Bugs milestone Jun 22, 2018
@LemurPwned LemurPwned added the bug label Jun 22, 2018
@LemurPwned LemurPwned self-assigned this Jun 22, 2018
@JakubChecinski
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I can confirm that arrows are now being drawn without normalization as well. This leaves only the 3D Cubic glitches - but if they are not reproducible outside of my laptop, then obviously there is not much we can do...

@LemurPwned
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Do these glitches occur each time or occasionally?
Apart from these particular settings, are there any other glitches remaining?

@JakubChecinski
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Here is what I got trying to reproduce the bug multiple times, using 3D Cubic and the same .omf file from 0200 nm example dataset:

Decimation set to 5: bug occurs 3/5 times
Decimation set to 4: 5/5 times
Decimation set to 3: 4/5 times
Decimation set to 2: 3/5 times
Decimation set to 1: 5/5 times
Overall with decimation: 20/25 times

Averaging set to 5: 3/5 times
Averaging set to 4: 3/5 times
Averaging set to 3: 3/5 times
Averaging set to 2: 2/5 times
Averaging set to 1: 2/5 times
Overall with averaging: 13/25 times

The issue seems to be slightly worse with decimation, but is certainly persistent in both cases. At the same time, it is not fully deterministic and sometimes just doesn't appear.

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