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Add tests for the switch to DimArrays #175

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merged 9 commits into from
Oct 4, 2022
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@felixcremer felixcremer commented Sep 28, 2022

This adds first tests for the use of DimArrays in YAXArrays.
Some of the tests are broken but can be used as targets for the development.
The working tests are copy pasted from other files of the test suite.

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Benchmark result

Judge result

Benchmark Report for /home/runner/work/YAXArrays.jl/YAXArrays.jl

Job Properties

  • Time of benchmarks:
    • Target: 28 Sep 2022 - 14:01
    • Baseline: 28 Sep 2022 - 14:02
  • Package commits:
    • Target: e5255d
    • Baseline: 76773a
  • Julia commits:
    • Target: afb6c6
    • Baseline: afb6c6
  • Julia command flags:
    • Target: None
    • Baseline: None
  • Environment variables:
    • Target: None
    • Baseline: None

Results

A ratio greater than 1.0 denotes a possible regression (marked with ❌), while a ratio less
than 1.0 denotes a possible improvement (marked with ✅). Only significant results - results
that indicate possible regressions or improvements - are shown below (thus, an empty table means that all
benchmark results remained invariant between builds).

ID time ratio memory ratio
["mapslices", "small"] 0.01 (5%) ✅ 0.15 (1%) ✅

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

  • ["mapslices"]

Julia versioninfo

Target

Julia Version 1.8.1
Commit afb6c60d69a (2022-09-06 15:09 UTC)
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 20.04.5 LTS
  uname: Linux 5.15.0-1020-azure #25~20.04.1-Ubuntu SMP Thu Sep 1 19:20:56 UTC 2022 x86_64 x86_64
  CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: 
              speed         user         nice          sys         idle          irq
       #1  2095 MHz        817 s          2 s        199 s       1739 s          0 s
       #2  2095 MHz       1288 s          2 s        250 s       1232 s          0 s
  Memory: 6.781253814697266 GB (2985.00390625 MB free)
  Uptime: 281.0 sec
  Load Avg:  1.43  0.94  0.4
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-13.0.1 (ORCJIT, skylake-avx512)
  Threads: 1 on 2 virtual cores

Baseline

Julia Version 1.8.1
Commit afb6c60d69a (2022-09-06 15:09 UTC)
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 20.04.5 LTS
  uname: Linux 5.15.0-1020-azure #25~20.04.1-Ubuntu SMP Thu Sep 1 19:20:56 UTC 2022 x86_64 x86_64
  CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: 
              speed         user         nice          sys         idle          irq
       #1  2095 MHz       1131 s          2 s        210 s       1822 s          0 s
       #2  2095 MHz       1379 s          2 s        256 s       1542 s          0 s
  Memory: 6.781253814697266 GB (3099.5625 MB free)
  Uptime: 321.85 sec
  Load Avg:  1.3  0.96  0.43
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-13.0.1 (ORCJIT, skylake-avx512)
  Threads: 1 on 2 virtual cores

Target result

Benchmark Report for /home/runner/work/YAXArrays.jl/YAXArrays.jl

Job Properties

  • Time of benchmark: 28 Sep 2022 - 14:1
  • Package commit: e5255d
  • Julia commit: afb6c6
  • Julia command flags: None
  • Environment variables: None

Results

Below is a table of this job's results, obtained by running the benchmarks.
The values listed in the ID column have the structure [parent_group, child_group, ..., key], and can be used to
index into the BaseBenchmarks suite to retrieve the corresponding benchmarks.
The percentages accompanying time and memory values in the below table are noise tolerances. The "true"
time/memory value for a given benchmark is expected to fall within this percentage of the reported value.
An empty cell means that the value was zero.

ID time GC time memory allocations
["mapslices", "small"] 195.481 ms (5%) 2.159 ms 326.03 MiB (1%) 91574

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

  • ["mapslices"]

Julia versioninfo

Julia Version 1.8.1
Commit afb6c60d69a (2022-09-06 15:09 UTC)
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 20.04.5 LTS
  uname: Linux 5.15.0-1020-azure #25~20.04.1-Ubuntu SMP Thu Sep 1 19:20:56 UTC 2022 x86_64 x86_64
  CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: 
              speed         user         nice          sys         idle          irq
       #1  2095 MHz        817 s          2 s        199 s       1739 s          0 s
       #2  2095 MHz       1288 s          2 s        250 s       1232 s          0 s
  Memory: 6.781253814697266 GB (2985.00390625 MB free)
  Uptime: 281.0 sec
  Load Avg:  1.43  0.94  0.4
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-13.0.1 (ORCJIT, skylake-avx512)
  Threads: 1 on 2 virtual cores

Baseline result

Benchmark Report for /home/runner/work/YAXArrays.jl/YAXArrays.jl

Job Properties

  • Time of benchmark: 28 Sep 2022 - 14:2
  • Package commit: 76773a
  • Julia commit: afb6c6
  • Julia command flags: None
  • Environment variables: None

Results

Below is a table of this job's results, obtained by running the benchmarks.
The values listed in the ID column have the structure [parent_group, child_group, ..., key], and can be used to
index into the BaseBenchmarks suite to retrieve the corresponding benchmarks.
The percentages accompanying time and memory values in the below table are noise tolerances. The "true"
time/memory value for a given benchmark is expected to fall within this percentage of the reported value.
An empty cell means that the value was zero.

ID time GC time memory allocations
["mapslices", "small"] 14.825 s (5%) 1.122 s 2.15 GiB (1%) 34999424

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

  • ["mapslices"]

Julia versioninfo

Julia Version 1.8.1
Commit afb6c60d69a (2022-09-06 15:09 UTC)
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 20.04.5 LTS
  uname: Linux 5.15.0-1020-azure #25~20.04.1-Ubuntu SMP Thu Sep 1 19:20:56 UTC 2022 x86_64 x86_64
  CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: 
              speed         user         nice          sys         idle          irq
       #1  2095 MHz       1131 s          2 s        210 s       1822 s          0 s
       #2  2095 MHz       1379 s          2 s        256 s       1542 s          0 s
  Memory: 6.781253814697266 GB (3099.5625 MB free)
  Uptime: 321.85 sec
  Load Avg:  1.3  0.96  0.43
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-13.0.1 (ORCJIT, skylake-avx512)
  Threads: 1 on 2 virtual cores

Runtime information

Runtime Info
BLAS #threads 1
BLAS.vendor() openblas64
Sys.CPU_THREADS 2

lscpu output:

Architecture:                    x86_64
CPU op-mode(s):                  32-bit, 64-bit
Byte Order:                      Little Endian
Address sizes:                   46 bits physical, 48 bits virtual
CPU(s):                          2
On-line CPU(s) list:             0,1
Thread(s) per core:              1
Core(s) per socket:              2
Socket(s):                       1
NUMA node(s):                    1
Vendor ID:                       GenuineIntel
CPU family:                      6
Model:                           85
Model name:                      Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz
Stepping:                        4
CPU MHz:                         2095.177
BogoMIPS:                        4190.35
Hypervisor vendor:               Microsoft
Virtualization type:             full
L1d cache:                       64 KiB
L1i cache:                       64 KiB
L2 cache:                        2 MiB
L3 cache:                        35.8 MiB
NUMA node0 CPU(s):               0,1
Vulnerability Itlb multihit:     KVM: Mitigation: VMX unsupported
Vulnerability L1tf:              Mitigation; PTE Inversion
Vulnerability Mds:               Mitigation; Clear CPU buffers; SMT Host state unknown
Vulnerability Meltdown:          Mitigation; PTI
Vulnerability Mmio stale data:   Vulnerable: Clear CPU buffers attempted, no microcode; SMT Host state unknown
Vulnerability Retbleed:          Vulnerable
Vulnerability Spec store bypass: Vulnerable
Vulnerability Spectre v1:        Mitigation; usercopy/swapgs barriers and __user pointer sanitization
Vulnerability Spectre v2:        Mitigation; Retpolines, STIBP disabled, RSB filling
Vulnerability Srbds:             Not affected
Vulnerability Tsx async abort:   Mitigation; Clear CPU buffers; SMT Host state unknown
Flags:                           fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ss ht syscall nx pdpe1gb rdtscp lm constant_tsc rep_good nopl xtopology cpuid pni pclmulqdq ssse3 fma cx16 pcid sse4_1 sse4_2 movbe popcnt aes xsave avx f16c rdrand hypervisor lahf_lm abm 3dnowprefetch invpcid_single pti fsgsbase bmi1 hle avx2 smep bmi2 erms invpcid rtm avx512f avx512dq rdseed adx smap clflushopt avx512cd avx512bw avx512vl xsaveopt xsavec xsaves md_clear
Cpu Property Value
Brand Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz
Vendor :Intel
Architecture :Skylake
Model Family: 0x06, Model: 0x55, Stepping: 0x04, Type: 0x00
Cores 2 physical cores, 2 logical cores (on executing CPU)
No Hyperthreading hardware capability detected
Clock Frequencies Not supported by CPU
Data Cache Level 1:3 : (32, 1024, 36608) kbytes
64 byte cache line size
Address Size 48 bits virtual, 46 bits physical
SIMD 512 bit = 64 byte max. SIMD vector size
Time Stamp Counter TSC is accessible via rdtsc
TSC increased at every clock cycle (non-invariant TSC)
Perf. Monitoring Performance Monitoring Counters (PMC) are not supported
Hypervisor Yes, Microsoft

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coveralls commented Sep 28, 2022

Pull Request Test Coverage Report for Build 3150086356

  • 0 of 0 changed or added relevant lines in 0 files are covered.
  • No unchanged relevant lines lost coverage.
  • Overall coverage increased (+0.1%) to 74.118%

Totals Coverage Status
Change from base Build 3135001268: 0.1%
Covered Lines: 1260
Relevant Lines: 1700

💛 - Coveralls

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codecov bot commented Sep 28, 2022

Codecov Report

Base: 73.96% // Head: 74.11% // Increases project coverage by +0.14% 🎉

Coverage data is based on head (6aa6ad6) compared to base (fa6da51).
Patch has no changes to coverable lines.

Additional details and impacted files
@@            Coverage Diff             @@
##           master     #175      +/-   ##
==========================================
+ Coverage   73.96%   74.11%   +0.14%     
==========================================
  Files          12       12              
  Lines        1698     1700       +2     
==========================================
+ Hits         1256     1260       +4     
+ Misses        442      440       -2     
Impacted Files Coverage Δ
src/Cubes/Axes.jl 82.63% <0.00%> (+0.12%) ⬆️
src/Cubes/Cubes.jl 91.13% <0.00%> (+1.33%) ⬆️

Help us with your feedback. Take ten seconds to tell us how you rate us. Have a feature suggestion? Share it here.

☔ View full report at Codecov.
📢 Do you have feedback about the report comment? Let us know in this issue.

@felixcremer felixcremer marked this pull request as ready for review September 29, 2022 09:15
@felixcremer felixcremer requested a review from meggart September 29, 2022 09:15
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Benchmark result

Judge result

Benchmark Report for /home/runner/work/YAXArrays.jl/YAXArrays.jl

Job Properties

  • Time of benchmarks:
    • Target: 29 Sep 2022 - 09:18
    • Baseline: 29 Sep 2022 - 09:18
  • Package commits:
    • Target: 0de479
    • Baseline: 76773a
  • Julia commits:
    • Target: afb6c6
    • Baseline: afb6c6
  • Julia command flags:
    • Target: None
    • Baseline: None
  • Environment variables:
    • Target: None
    • Baseline: None

Results

A ratio greater than 1.0 denotes a possible regression (marked with ❌), while a ratio less
than 1.0 denotes a possible improvement (marked with ✅). Only significant results - results
that indicate possible regressions or improvements - are shown below (thus, an empty table means that all
benchmark results remained invariant between builds).

ID time ratio memory ratio
["mapslices", "small"] 0.01 (5%) ✅ 0.15 (1%) ✅

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

  • ["mapslices"]

Julia versioninfo

Target

Julia Version 1.8.1
Commit afb6c60d69a (2022-09-06 15:09 UTC)
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 20.04.5 LTS
  uname: Linux 5.15.0-1020-azure #25~20.04.1-Ubuntu SMP Thu Sep 1 19:20:56 UTC 2022 x86_64 x86_64
  CPU: Intel(R) Xeon(R) Platinum 8370C CPU @ 2.80GHz: 
              speed         user         nice          sys         idle          irq
       #1  2800 MHz        821 s          1 s        137 s       1147 s          0 s
       #2  2956 MHz        955 s          1 s        189 s        961 s          0 s
  Memory: 7.764659881591797 GB (3913.8671875 MB free)
  Uptime: 244.57 sec
  Load Avg:  1.7  1.0  0.42
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-13.0.1 (ORCJIT, icelake-server)
  Threads: 1 on 2 virtual cores

Baseline

Julia Version 1.8.1
Commit afb6c60d69a (2022-09-06 15:09 UTC)
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 20.04.5 LTS
  uname: Linux 5.15.0-1020-azure #25~20.04.1-Ubuntu SMP Thu Sep 1 19:20:56 UTC 2022 x86_64 x86_64
  CPU: Intel(R) Xeon(R) Platinum 8370C CPU @ 2.80GHz: 
              speed         user         nice          sys         idle          irq
       #1  2800 MHz       1029 s          1 s        143 s       1188 s          0 s
       #2  2816 MHz        998 s          1 s        191 s       1170 s          0 s
  Memory: 7.764659881591797 GB (4065.3046875 MB free)
  Uptime: 270.12 sec
  Load Avg:  1.46  1.0  0.44
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-13.0.1 (ORCJIT, icelake-server)
  Threads: 1 on 2 virtual cores

Target result

Benchmark Report for /home/runner/work/YAXArrays.jl/YAXArrays.jl

Job Properties

  • Time of benchmark: 29 Sep 2022 - 9:18
  • Package commit: 0de479
  • Julia commit: afb6c6
  • Julia command flags: None
  • Environment variables: None

Results

Below is a table of this job's results, obtained by running the benchmarks.
The values listed in the ID column have the structure [parent_group, child_group, ..., key], and can be used to
index into the BaseBenchmarks suite to retrieve the corresponding benchmarks.
The percentages accompanying time and memory values in the below table are noise tolerances. The "true"
time/memory value for a given benchmark is expected to fall within this percentage of the reported value.
An empty cell means that the value was zero.

ID time GC time memory allocations
["mapslices", "small"] 127.629 ms (5%) 1.387 ms 326.03 MiB (1%) 91574

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

  • ["mapslices"]

Julia versioninfo

Julia Version 1.8.1
Commit afb6c60d69a (2022-09-06 15:09 UTC)
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 20.04.5 LTS
  uname: Linux 5.15.0-1020-azure #25~20.04.1-Ubuntu SMP Thu Sep 1 19:20:56 UTC 2022 x86_64 x86_64
  CPU: Intel(R) Xeon(R) Platinum 8370C CPU @ 2.80GHz: 
              speed         user         nice          sys         idle          irq
       #1  2800 MHz        821 s          1 s        137 s       1147 s          0 s
       #2  2956 MHz        955 s          1 s        189 s        961 s          0 s
  Memory: 7.764659881591797 GB (3913.8671875 MB free)
  Uptime: 244.57 sec
  Load Avg:  1.7  1.0  0.42
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-13.0.1 (ORCJIT, icelake-server)
  Threads: 1 on 2 virtual cores

Baseline result

Benchmark Report for /home/runner/work/YAXArrays.jl/YAXArrays.jl

Job Properties

  • Time of benchmark: 29 Sep 2022 - 9:18
  • Package commit: 76773a
  • Julia commit: afb6c6
  • Julia command flags: None
  • Environment variables: None

Results

Below is a table of this job's results, obtained by running the benchmarks.
The values listed in the ID column have the structure [parent_group, child_group, ..., key], and can be used to
index into the BaseBenchmarks suite to retrieve the corresponding benchmarks.
The percentages accompanying time and memory values in the below table are noise tolerances. The "true"
time/memory value for a given benchmark is expected to fall within this percentage of the reported value.
An empty cell means that the value was zero.

ID time GC time memory allocations
["mapslices", "small"] 9.541 s (5%) 763.040 ms 2.15 GiB (1%) 34991068

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

  • ["mapslices"]

Julia versioninfo

Julia Version 1.8.1
Commit afb6c60d69a (2022-09-06 15:09 UTC)
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 20.04.5 LTS
  uname: Linux 5.15.0-1020-azure #25~20.04.1-Ubuntu SMP Thu Sep 1 19:20:56 UTC 2022 x86_64 x86_64
  CPU: Intel(R) Xeon(R) Platinum 8370C CPU @ 2.80GHz: 
              speed         user         nice          sys         idle          irq
       #1  2800 MHz       1029 s          1 s        143 s       1188 s          0 s
       #2  2816 MHz        998 s          1 s        191 s       1170 s          0 s
  Memory: 7.764659881591797 GB (4065.3046875 MB free)
  Uptime: 270.12 sec
  Load Avg:  1.46  1.0  0.44
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-13.0.1 (ORCJIT, icelake-server)
  Threads: 1 on 2 virtual cores

Runtime information

Runtime Info
BLAS #threads 1
BLAS.vendor() openblas64
Sys.CPU_THREADS 2

lscpu output:

Architecture:                    x86_64
CPU op-mode(s):                  32-bit, 64-bit
Byte Order:                      Little Endian
Address sizes:                   46 bits physical, 57 bits virtual
CPU(s):                          2
On-line CPU(s) list:             0,1
Thread(s) per core:              2
Core(s) per socket:              1
Socket(s):                       1
NUMA node(s):                    1
Vendor ID:                       GenuineIntel
CPU family:                      6
Model:                           106
Model name:                      Intel(R) Xeon(R) Platinum 8370C CPU @ 2.80GHz
Stepping:                        6
CPU MHz:                         3486.635
CPU max MHz:                     2800.0000
CPU min MHz:                     800.0000
BogoMIPS:                        5586.87
Virtualization:                  VT-x
Hypervisor vendor:               Microsoft
Virtualization type:             full
L1d cache:                       48 KiB
L1i cache:                       32 KiB
L2 cache:                        1.3 MiB
L3 cache:                        48 MiB
NUMA node0 CPU(s):               0,1
Vulnerability Itlb multihit:     Not affected
Vulnerability L1tf:              Not affected
Vulnerability Mds:               Not affected
Vulnerability Meltdown:          Not affected
Vulnerability Mmio stale data:   Vulnerable: Clear CPU buffers attempted, no microcode; SMT Host state unknown
Vulnerability Retbleed:          Vulnerable
Vulnerability Spec store bypass: Vulnerable
Vulnerability Spectre v1:        Mitigation; usercopy/swapgs barriers and __user pointer sanitization
Vulnerability Spectre v2:        Mitigation; Retpolines, STIBP disabled, RSB filling
Vulnerability Srbds:             Not affected
Vulnerability Tsx async abort:   Not affected
Flags:                           fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ss ht syscall nx pdpe1gb rdtscp lm constant_tsc rep_good nopl xtopology tsc_reliable nonstop_tsc cpuid aperfmperf pni pclmulqdq vmx ssse3 fma cx16 pcid sse4_1 sse4_2 movbe popcnt tsc_deadline_timer aes xsave avx f16c rdrand hypervisor lahf_lm abm 3dnowprefetch invpcid_single tpr_shadow vnmi ept vpid ept_ad fsgsbase tsc_adjust bmi1 hle avx2 smep bmi2 erms invpcid rtm avx512f avx512dq rdseed adx smap avx512ifma clflushopt clwb avx512cd sha_ni avx512bw avx512vl xsaveopt xsavec xgetbv1 xsaves avx512vbmi umip avx512_vbmi2 gfni vaes vpclmulqdq avx512_vnni avx512_bitalg avx512_vpopcntdq la57 rdpid fsrm arch_capabilities
Cpu Property Value
Brand Intel(R) Xeon(R) Platinum 8370C CPU @ 2.80GHz
Vendor :Intel
Architecture :UnknownIntel
Model Family: 0x06, Model: 0x6a, Stepping: 0x06, Type: 0x00
Cores 1 physical cores, 2 logical cores (on executing CPU)
Hyperthreading hardware capability detected
Clock Frequencies Not supported by CPU
Data Cache Level 1:3 : (48, 1280, 49152) kbytes
64 byte cache line size
Address Size 57 bits virtual, 46 bits physical
SIMD 512 bit = 64 byte max. SIMD vector size
Time Stamp Counter TSC is accessible via rdtsc
TSC runs at constant rate (invariant from clock frequency)
Perf. Monitoring Performance Monitoring Counters (PMC) are not supported
Hypervisor Yes, Microsoft

@felixcremer felixcremer merged commit eb44930 into master Oct 4, 2022
@lazarusA
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lazarusA commented Oct 7, 2022

does it make sense to make this also work for Datasets? I just stumble with this use case.

@lazarusA lazarusA deleted the fc/dimdatatests branch August 12, 2023 08:53
@coveralls
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Pull Request Test Coverage Report for Build 3150086356

Warning: This coverage report may be inaccurate.

This pull request's base commit is no longer the HEAD commit of its target branch. This means it includes changes from outside the original pull request, including, potentially, unrelated coverage changes.

Details

  • 0 of 0 changed or added relevant lines in 0 files are covered.
  • No unchanged relevant lines lost coverage.
  • Overall coverage increased (+0.1%) to 74.118%

Totals Coverage Status
Change from base Build 3135001268: 0.1%
Covered Lines: 1260
Relevant Lines: 1700

💛 - Coveralls

1 similar comment
@coveralls
Copy link

Pull Request Test Coverage Report for Build 3150086356

Warning: This coverage report may be inaccurate.

This pull request's base commit is no longer the HEAD commit of its target branch. This means it includes changes from outside the original pull request, including, potentially, unrelated coverage changes.

Details

  • 0 of 0 changed or added relevant lines in 0 files are covered.
  • No unchanged relevant lines lost coverage.
  • Overall coverage increased (+0.1%) to 74.118%

Totals Coverage Status
Change from base Build 3135001268: 0.1%
Covered Lines: 1260
Relevant Lines: 1700

💛 - Coveralls

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3 participants