diff --git a/static/js/687.f75f6841.chunk.js.map b/static/js/687.f75f6841.chunk.js.map
index c4d210f..fc48fed 100644
--- a/static/js/687.f75f6841.chunk.js.map
+++ b/static/js/687.f75f6841.chunk.js.map
@@ -1 +1 @@
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React from 'react'\nimport { v4 as generateUUID } from 'uuid'\nimport { Card, Descriptions } from 'antd'\n\nexport interface Attribute {\n  name: string\n  value: any\n}\n\nexport interface AttributeGroup {\n  name: string\n  attributes: Attribute[]\n}\n\ninterface DescriptionProps {\n  header?: string\n  icon?: any\n  attributes: Attribute[]\n  selectable?: boolean\n  hasLongValues?: boolean\n  methods?: React.ReactNode[]\n  children?: React.ReactNode\n}\n\n/**\n * React component for a description consisting of a header containing a\n * header and a body containing a list of name-value pairs.\n */\nclass Description extends React.Component<DescriptionProps, {}> {\n  render (): React.ReactNode {\n    let layout: 'horizontal' | 'vertical' = 'horizontal'\n    let labelLineHeight = '14px'\n    const contentLineHeight = '14px'\n    if (this.props.hasLongValues !== undefined && this.props.hasLongValues) {\n      layout = 'vertical'\n      labelLineHeight = '20px'\n    }\n    const items = this.props.attributes.map((item: Attribute, index: number) => {\n      const uid = generateUUID()\n      return (\n        <Descriptions.Item\n          key={uid}\n          label={item.name}\n          labelStyle={{\n            lineHeight: labelLineHeight\n          }}\n          contentStyle={{\n            fontWeight: 600,\n            whiteSpace: 'pre-line',\n            lineHeight: contentLineHeight\n          }}\n          span={1}\n        >\n          {item.value}\n        </Descriptions.Item>\n      )\n    })\n    let icon = null\n    if (this.props.icon !== undefined) {\n      icon = <this.props.icon />\n    }\n    return (\n      <Card\n        title={this.props.header}\n        extra={icon}\n        size='small'\n        hoverable={this.props.selectable}\n        bordered={this.props.header !== undefined}\n        actions={this.props.methods}\n      >\n        <Descriptions\n          column={1}\n          size='small'\n          layout={layout}\n          bordered={false}\n        >\n          {items}\n        </Descriptions>\n        {this.props.children}\n      </Card>\n    )\n  }\n}\n\nexport default Description\n","import React from 'react'\nimport * as dmv from 'dicom-microscopy-viewer'\n\nimport Description from './Description'\n\ninterface ClinicalTrialProps {\n  metadata: dmv.metadata.SOPClass\n}\n\n/**\n * React component representing a DICOM ClinicalTrial Information Entity that displays\n * common study-level attributes of contained DICOM Slide Microscopy images.\n */\nclass ClinicalTrial extends React.Component<ClinicalTrialProps> {\n  render (): React.ReactNode {\n    const attributes = []\n    if (this.props.metadata.ClinicalTrialSponsorName != null) {\n      // Attributes of Clinical Trial Subject module\n      attributes.push(\n        ...[\n          {\n            name: 'Sponsor Name',\n            value: this.props.metadata.ClinicalTrialSponsorName\n          },\n          {\n            name: 'Protocol ID',\n            value: this.props.metadata.ClinicalTrialProtocolID\n          },\n          {\n            name: 'Protocol Name',\n            value: this.props.metadata.ClinicalTrialProtocolName\n          },\n          {\n            name: 'Site Name',\n            value: this.props.metadata.ClinicalTrialSiteName\n          }\n        ]\n      )\n    }\n    if (this.props.metadata.ClinicalTrialTimePointID != null) {\n      // Attributes of Clinical Trial Study module\n      attributes.push(\n        {\n          name: 'Time Point ID',\n          value: this.props.metadata.ClinicalTrialTimePointID\n        }\n      )\n    }\n    // Attributes of Clinical Trial Subject module\n    return <Description attributes={attributes} />\n  }\n}\n\nexport default ClinicalTrial\n","import * as dmv from 'dicom-microscopy-viewer'\n\nfunction parseName (value: dmv.metadata.PersonName|null|undefined): string {\n  if (typeof value === 'object' && value !== null && value !== undefined) {\n    if (value.Alphabetic !== undefined) {\n      return value.Alphabetic.split('^').join(' ')\n    }\n    return ''\n  }\n  return ''\n}\n\nfunction parseDate (value: string|null|undefined): string {\n  if (value !== null && value !== undefined) {\n    const year = value.substring(0, 4)\n    const month = value.substring(4, 6)\n    const day = value.substring(6, 8)\n    return `${year}-${month}-${day}`\n  }\n  return ''\n}\n\nfunction parseTime (value: string|null|undefined): string {\n  if (value !== null && value !== undefined) {\n    const hours = value.substring(0, 2)\n    const minutes = value.substring(2, 4)\n    const seconds = value.substring(4, 6)\n    return `${hours}:${minutes}:${seconds}`\n  }\n  return ''\n}\n\nfunction parseDateTime (value: string|null|undefined): string {\n  if (value !== null && value !== undefined) {\n    const year = value.substring(0, 4)\n    const month = value.substring(4, 6)\n    const day = value.substring(6, 8)\n    const hours = value.substring(8, 10)\n    const minutes = value.substring(10, 12)\n    const seconds = value.substring(12, 14)\n    return `${year}-${month}-${day} ${hours}:${minutes}:${seconds}`\n  }\n  return ''\n}\n\nfunction parseSex (value: string|null|undefined): string {\n  const lut: { [key: string]: string } = {\n    F: 'Female',\n    M: 'Male',\n    O: 'Other'\n  }\n  if (value !== null && value !== undefined) {\n    return lut[value]\n  }\n  return ''\n}\n\nexport { parseDate, parseDateTime, parseName, parseSex, parseTime }\n","import React from 'react'\nimport * as dmv from 'dicom-microscopy-viewer'\n\nimport Description from './Description'\nimport { parseName, parseSex, parseDate } from '../utils/values'\n\ninterface PatientProps {\n  metadata: dmv.metadata.Study|dmv.metadata.SOPClass\n}\n\n/**\n * React component representing a DICOM Patient Information Entity that\n * displays common study-level, patient-related attributes of contained\n * DICOM Slide Microscopy images.\n */\nclass Patient extends React.Component<PatientProps, {}> {\n  render (): React.ReactNode {\n    const attributes = [\n      {\n        name: 'ID',\n        value: this.props.metadata.PatientID\n      },\n      {\n        name: 'Name',\n        value: parseName(this.props.metadata.PatientName)\n      },\n      {\n        name: 'Gender',\n        value: parseSex(this.props.metadata.PatientSex)\n      },\n      {\n        name: 'Birthdate',\n        value: parseDate(this.props.metadata.PatientBirthDate)\n      }\n    ]\n    return (\n      <Description attributes={attributes} />\n    )\n  }\n}\n\nexport default Patient\n","import React from 'react'\nimport * as dmv from 'dicom-microscopy-viewer'\n\nimport Description from './Description'\nimport { parseDate, parseTime } from '../utils/values'\n\ninterface StudyProps {\n  metadata: dmv.metadata.Study|dmv.metadata.SOPClass\n}\n\n/**\n * React component representing a DICOM Study Information Entity that displays\n * common study-level attributes of contained DICOM Slide Microscopy images.\n */\nclass Study extends React.Component<StudyProps> {\n  render (): React.ReactNode {\n    const attributes = [\n      {\n        name: 'Accession #',\n        value: this.props.metadata.AccessionNumber\n      },\n      {\n        name: 'ID',\n        value: this.props.metadata.StudyID\n      },\n      {\n        name: 'Date',\n        value: parseDate(this.props.metadata.StudyDate)\n      },\n      {\n        name: 'Time',\n        value: parseTime(this.props.metadata.StudyTime)\n      }\n    ]\n    return <Description attributes={attributes} />\n  }\n}\n\nexport default Study\n","export enum StorageClasses {\n  VL_WHOLE_SLIDE_MICROSCOPY_IMAGE = '1.2.840.10008.5.1.4.1.1.77.1.6',\n  COMPREHENSIVE_SR = '1.2.840.10008.5.1.4.1.1.88.33',\n  COMPREHENSIVE_3D_SR = '1.2.840.10008.5.1.4.1.1.88.34',\n  SEGMENTATION = '1.2.840.10008.5.1.4.1.1.66.4',\n  MICROSCOPY_BULK_SIMPLE_ANNOTATION = '1.2.840.10008.5.1.4.1.1.91.1',\n  PARAMETRIC_MAP = '1.2.840.10008.5.1.4.1.1.30',\n  ADVANCED_BLENDING_PRESENTATION_STATE = '1.2.840.10008.5.1.4.1.1.11.8',\n  COLOR_SOFTCOPY_PRESENTATION_STATE = '1.2.840.10008.5.1.4.1.1.11.2',\n  GRAYSCALE_SOFTCOPY_PRESENTATION_STATE = '1.2.840.10008.5.1.4.1.1.11.1',\n  PSEUDOCOLOR_SOFTCOPY_PRESENTATION_STATE = '1.2.840.10008.5.1.4.1.1.11.3'\n}\n","// Use symbols to prevent exposing private attributes\nconst _subscriptions = Symbol('subscriptions')\nconst _lastSubscriptionId = Symbol('lastSubscriptionId')\n\n/**\n * Class to enable implementation of publish/subscribe pattern\n * @class\n * @classdesc Enables publishing/subscribing\n */\nexport default class PubSub {\n  constructor () {\n    this[_subscriptions] = {}\n    this[_lastSubscriptionId] = 0\n  }\n\n  /**\n   * Adds a subscription callback to the provided event name\n   * @param {string} eventName Event name that will trigger the callback\n   * @param {Function} callback Function to be executed when event is published\n   * @returns {void}\n   */\n  subscribe (eventName, callback) {\n    if (eventName === undefined) {\n      throw new Error('Trying to subscribe to an inexistent event')\n    }\n\n    if (typeof callback !== 'function') {\n      throw new Error('The provided callback must be a function')\n    }\n\n    if (!this[_subscriptions].hasOwnProperty(eventName)) {\n      this[_subscriptions][eventName] = {}\n    }\n\n    const subscriptionId = `sub${this[_lastSubscriptionId]++}`\n    this[_subscriptions][eventName][subscriptionId] = callback\n  }\n\n  /**\n   * Removes a subscription callback for the provided event name\n   * @param {string} eventName Event name for the registerd callback\n   * @param {Function} [callback] Function to have its subscription removed\n   * @returns {void}\n   */\n  unsubscribe (eventName, callback) {\n    const callbacks = this[_subscriptions][eventName] || {}\n    for (const subscriptionId in callbacks) {\n      if (!callback) {\n        delete callbacks[subscriptionId]\n      } else if (callbacks[subscriptionId] === callback) {\n        delete callbacks[subscriptionId]\n      }\n    }\n  }\n\n  /**\n   * Trigger all registered subscription callbacks for a specific event name\n   * @param {String} eventName Event name to trigger subscriptions from\n   * @param {any} [payload] Payload that will be passed to the callback fuction\n   * @returns {void}\n   */\n  publish (eventName, ...payload) {\n    if (eventName === undefined) {\n      throw new Error('Trying to publish an inexistent event')\n    }\n\n    const callbacks = this[_subscriptions][eventName] || {}\n    for (const subscriptionId in callbacks) {\n      callbacks[subscriptionId](...payload)\n    }\n  }\n\n  /**\n   * Cleares all subscriptions for current instance\n   * @returns {void}\n   */\n  unsubscribeFromAll () {\n    for (const eventName in this[_subscriptions]) {\n      const callbacks = this[_subscriptions][eventName]\n      for (const subscriptionId in callbacks) {\n        delete callbacks[subscriptionId]\n      }\n    }\n  }\n}\n","const errorTypes = {\n  AUTHENTICATION: 'Authentication',\n  COMMUNICATION: 'Communication',\n  ENCODINGANDDECODING: 'EncodingDecoding',\n  VISUALIZATION: 'Visualization'\n}\n\nclass CustomError extends Error {\n  constructor (type, message) {\n    super()\n    this.message = message\n    this.stack = new Error().stack\n    this.type = type\n  }\n}\n\nexport { errorTypes, CustomError }\n","import PubSub from '../utils/PubSub'\nimport { notification } from 'antd'\nimport { CustomError, errorTypes } from '../utils/CustomError'\n\nexport const NotificationMiddlewareEvents = {\n  OnError: 'onError',\n  OnWarning: 'onWarning'\n}\n\nexport const NotificationMiddlewareContext = {\n  DICOMWEB: 'dicomweb-client',\n  DMV: 'dicom-microscopy-viewer',\n  DCMJS: 'dcmjs',\n  SLIM: 'slim',\n  AUTH: 'authentication'\n}\n\nconst NotificationType = {\n  TOAST: 'toast',\n  CONSOLE: 'console'\n}\n\n/* Sources of Error:\n  1. 'dicomweb-client': Error while requesting/fetching data, tagged as 'Communication'\n  2. 'slim' and 'dicom-microscopy-viewer' library: Error related to dicom data encoding/decoding,\n  could directly/indirectly impact image-related visualization, tagged as 'Visualization' or\n  'Encoding/Decoding' accordingly\n  3. 'dcmjs' library: Data parsing error, tagged as 'DICOMError'\n  4. 'authentication': Error during user authentication, tagged as 'Authentication'\n  */\nconst NotificationSourceDefinition = {\n  sources: [\n    {\n      category: errorTypes.AUTHENTICATION,\n      notificationType: NotificationType.TOAST\n    },\n    {\n      category: errorTypes.COMMUNICATION,\n      notificationType: NotificationType.TOAST\n    },\n    {\n      category: errorTypes.VISUALIZATION,\n      notificationType: NotificationType.TOAST\n    },\n    {\n      category: errorTypes.ENCODINGANDDECODING,\n      notificationType: NotificationType.CONSOLE\n    },\n    {\n      category: 'Warning',\n      notificationType: NotificationType.TOAST\n    }\n  ]\n}\n\nclass NotificationMiddleware extends PubSub {\n  constructor () {\n    super()\n\n    const outerContext = (args) => {\n      this.publish(NotificationMiddlewareEvents.OnWarning, Array.from(args).join(' '))\n    }\n\n    (function () {\n      const warn = console.warn\n      console.warn = function () {\n        if (!JSON.stringify(arguments).includes('request')) {\n          outerContext(arguments)\n        }\n        warn.apply(this, Array.prototype.slice.call(arguments))\n      }\n    }())\n  }\n\n  /**\n   * Error handling middleware function\n   *\n   * @param source - source of error - dicomweb-client, dmv, dcmjs or slim itself\n   * @param error - error object\n   */\n  onError (source, error) {\n    const errorCategory = error.type\n    const sourceConfig = NotificationSourceDefinition.sources.find(\n      s => s.category === errorCategory\n    )\n\n    const { notificationType } = sourceConfig\n\n    this.publish(NotificationMiddlewareEvents.OnError, {\n      source,\n      error\n    })\n\n    let notificationMsg\n    if (error instanceof CustomError) {\n      notificationMsg = error.message\n    } else {\n      notificationMsg = String(error)\n    }\n\n    switch (notificationType) {\n      case NotificationType.TOAST:\n        console.error(`A ${errorCategory} error occurred: `, error)\n        return notification.error({\n          message: `${errorCategory} error`,\n          description: notificationMsg,\n          duration: 3\n        })\n\n      case NotificationType.CONSOLE:\n        console.error(`A ${errorCategory} error occurred: `, error)\n        break\n\n      default:\n    }\n  }\n}\n\nexport default new NotificationMiddleware()\n","import React from 'react'\nimport { FaSpinner } from 'react-icons/fa'\nimport * as dmv from 'dicom-microscopy-viewer'\nimport { Menu } from 'antd'\n\nimport DicomWebManager from '../DicomWebManager'\nimport Description from './Description'\nimport { Slide } from '../data/slides'\nimport { StorageClasses } from '../data/uids'\nimport NotificationMiddleware, {\n  NotificationMiddlewareContext\n} from '../services/NotificationMiddleware'\nimport { CustomError } from '../utils/CustomError'\n\ninterface SlideItemProps {\n  clients: { [key: string]: DicomWebManager }\n  slide: Slide\n}\n\ninterface SlideItemState {\n  isLoading: boolean\n}\n\n/**\n * React component representing a DICOM Series Information Entity that displays\n * common series-level attributes of contained DICOM Slide Microscopy images\n * as well as the OVERVIEW image (if available).\n * When selected a Slide Viewer instance is created for the display of the\n * contained images.\n */\nclass SlideItem extends React.Component<SlideItemProps, SlideItemState> {\n  state = { isLoading: false }\n\n  private readonly overviewViewportRef = React.createRef<HTMLDivElement>()\n\n  private overviewViewer?: dmv.viewer.OverviewImageViewer\n\n  constructor (props: SlideItemProps) {\n    super(props)\n    this.overviewViewer = undefined\n  }\n\n  componentDidMount (): void {\n    this.setState({ isLoading: true })\n    if (this.props.slide.overviewImages.length > 0) {\n      const metadata = this.props.slide.overviewImages[0]\n      if (this.overviewViewportRef.current !== null) {\n        this.overviewViewportRef.current.innerHTML = ''\n        console.info(\n          'instantiate viewer for OVERVIEW image of slide ' +\n          `\"${metadata.ContainerIdentifier}\"`\n        )\n        this.overviewViewer = new dmv.viewer.OverviewImageViewer({\n          client: this.props.clients[\n            StorageClasses.VL_WHOLE_SLIDE_MICROSCOPY_IMAGE\n          ],\n          metadata: metadata,\n          resizeFactor: 1,\n          errorInterceptor: (error: CustomError) => {\n            NotificationMiddleware.onError(\n              NotificationMiddlewareContext.DMV,\n              error\n            )\n          }\n        })\n        this.overviewViewer.render({\n          container: this.overviewViewportRef.current\n        })\n      }\n    }\n\n    this.setState({ isLoading: false })\n  }\n\n  render (): React.ReactNode {\n    if (this.overviewViewer !== undefined) {\n      this.overviewViewer.resize()\n    }\n    const attributes = []\n    const description = this.props.slide.description\n    if (description != null && description !== '') {\n      attributes.push({\n        name: 'Description',\n        value: description\n      })\n    }\n    if (this.state.isLoading) {\n      return (<FaSpinner />)\n    }\n\n    /* Properties need to be propagated down to Menu.Item:\n     * https://github.com/react-component/menu/issues/142\n     */\n    return (\n      <Menu.Item\n        style={{ height: '100%' }}\n        key={this.props.slide.seriesInstanceUIDs[0]}\n        {...this.props}\n      >\n        <Description\n          header={this.props.slide.containerIdentifier}\n          attributes={attributes}\n          selectable\n        >\n          {(this.overviewViewportRef.current != null) && <div style={{ height: '100px' }} ref={this.overviewViewportRef} />}\n        </Description>\n      </Menu.Item>\n    )\n  }\n}\n\nexport default SlideItem\n","import React from 'react'\nimport { Menu } from 'antd'\n\nimport DicomWebManager from '../DicomWebManager'\nimport SlideItem from './SlideItem'\nimport { Slide } from '../data/slides'\n\ninterface SlideListProps {\n  metadata: Slide[]\n  clients: { [key: string]: DicomWebManager }\n  selectedSeriesInstanceUID: string\n  onSeriesSelection: (\n    { seriesInstanceUID }: { seriesInstanceUID: string }\n  ) => void\n}\n\ninterface SlideListState {\n  selectedSeriesInstanceUID: string\n}\n\n/**\n * React component representing a list of DICOM Series Information Entities.\n */\nclass SlideList extends React.Component<SlideListProps, SlideListState> {\n  state = {\n    selectedSeriesInstanceUID: this.props.selectedSeriesInstanceUID\n  }\n\n  componentDidMount (): void {\n    this.props.onSeriesSelection({\n      seriesInstanceUID: this.state.selectedSeriesInstanceUID\n    })\n  }\n\n  render (): React.ReactNode {\n    const slideList = this.props.metadata\n    const slideItemList = []\n    for (let i = 0; i < slideList.length; ++i) {\n      const slide = slideList[i]\n      const slideItem = (\n        <SlideItem\n          key={slide.seriesInstanceUIDs[0]}\n          slide={slide}\n          clients={this.props.clients}\n        />\n      )\n\n      slideItemList.push(slideItem)\n    }\n\n    const handleMenuItemSelection = ({ key, keyPath, domEvent, selectedKeys }: {\n      key: React.ReactText\n      keyPath: React.ReactText[]\n      domEvent: React.MouseEvent<HTMLElement> | React.KeyboardEvent<HTMLElement>\n      selectedKeys?: React.ReactText[]\n    }): void => {\n      console.info(`select slide \"${key}\"`)\n      this.setState({ selectedSeriesInstanceUID: key.toString() })\n      this.props.onSeriesSelection({ seriesInstanceUID: key.toString() })\n    }\n\n    let selectedKeys\n    if (this.state.selectedSeriesInstanceUID !== undefined &&\n      this.state.selectedSeriesInstanceUID !== null) {\n      selectedKeys = [this.state.selectedSeriesInstanceUID]\n    }\n\n    return (\n      <Menu\n        style={{ width: '100%' }}\n        selectedKeys={selectedKeys}\n        onSelect={handleMenuItemSelection}\n        mode='inline'\n        inlineIndent={0}\n      >\n        {slideItemList}\n      </Menu>\n    )\n  }\n}\n\nexport default SlideList\n","import React from 'react'\nimport * as dmv from 'dicom-microscopy-viewer'\nimport * as dcmjs from 'dcmjs'\nimport { Menu, Space, Switch } from 'antd'\nimport { FaEye, FaEyeSlash } from 'react-icons/fa'\n\nimport Description from './Description'\n\ninterface AnnotationItemProps {\n  roi: dmv.roi.ROI\n  index: number\n  isVisible: boolean\n  onVisibilityChange: ({ roiUID, isVisible }: {\n    roiUID: string\n    isVisible: boolean\n  }) => void\n}\n\n/**\n * React component representing a Region of Interest (ROI) annotation.\n */\nclass AnnotationItem extends React.Component<AnnotationItemProps, {}> {\n  constructor (props: AnnotationItemProps) {\n    super(props)\n    this.handleVisibilityChange = this.handleVisibilityChange.bind(this)\n  }\n\n  handleVisibilityChange (\n    checked: boolean,\n    event: React.MouseEvent<HTMLButtonElement>\n  ): void {\n    this.props.onVisibilityChange({\n      roiUID: this.props.roi.uid,\n      isVisible: checked\n    })\n  }\n\n  render (): React.ReactNode {\n    const identifier = `ROI ${this.props.index + 1}`\n    const attributes: Array<{ name: string, value: string }> = []\n    /**\n     * This hack is required for Menu.Item to work properly:\n     * https://github.com/react-component/menu/issues/142\n     */\n    const { isVisible, onVisibilityChange, ...otherProps } = this.props\n    this.props.roi.evaluations.forEach((\n      item: (\n        dcmjs.sr.valueTypes.TextContentItem |\n        dcmjs.sr.valueTypes.CodeContentItem\n      )\n    ) => {\n      const nameValue = item.ConceptNameCodeSequence[0].CodeValue\n      const nameMeaning = item.ConceptNameCodeSequence[0].CodeMeaning\n      const name = `${nameMeaning}`\n      if (item.ValueType === dcmjs.sr.valueTypes.ValueTypes.CODE) {\n        const codeContentItem = item as dcmjs.sr.valueTypes.CodeContentItem\n        const valueMeaning = codeContentItem.ConceptCodeSequence[0].CodeMeaning\n        // For consistency with Segment and Annotation Group\n        if (nameValue === '276214006') {\n          attributes.push({\n            name: 'Property category',\n            value: `${valueMeaning}`\n          })\n        } else if (nameValue === '121071') {\n          attributes.push({\n            name: 'Property type',\n            value: `${valueMeaning}`\n          })\n        } else if (nameValue === '111001') {\n          attributes.push({\n            name: 'Algorithm Name',\n            value: `${valueMeaning}`\n          })\n        } else {\n          attributes.push({\n            name: name,\n            value: `${valueMeaning}`\n          })\n        }\n      } else if (item.ValueType === dcmjs.sr.valueTypes.ValueTypes.TEXT) {\n        const textContentItem = item as dcmjs.sr.valueTypes.TextContentItem\n        attributes.push({\n          name: name,\n          value: textContentItem.TextValue\n        })\n      }\n    })\n    this.props.roi.measurements.forEach(item => {\n      const nameMeaning = item.ConceptNameCodeSequence[0].CodeMeaning\n      const name = `${nameMeaning}`\n      const seq = item.MeasuredValueSequence[0]\n      const value = seq.NumericValue.toPrecision(6)\n      const unit = seq.MeasurementUnitsCodeSequence[0].CodeValue\n      attributes.push({\n        name: name,\n        value: `${value} ${unit}`\n      })\n    })\n    return (\n      <Space align='start'>\n        <div style={{ paddingLeft: '14px' }}>\n          <Switch\n            size='small'\n            onChange={this.handleVisibilityChange}\n            checked={this.props.isVisible}\n            checkedChildren={<FaEye />}\n            unCheckedChildren={<FaEyeSlash />}\n          />\n        </div>\n        <Menu.Item\n          style={{ height: '100%', paddingLeft: '3px' }}\n          key={this.props.roi.uid}\n          {...otherProps}\n        >\n          <Description\n            header={identifier}\n            attributes={attributes}\n            selectable\n            hasLongValues\n          />\n        </Menu.Item>\n      </Space>\n    )\n  }\n}\n\nexport default AnnotationItem\n","import React from 'react'\nimport * as dmv from 'dicom-microscopy-viewer'\nimport { Menu, Switch } from 'antd'\nimport { FaEye, FaEyeSlash } from 'react-icons/fa'\n\nimport AnnotationItem from './AnnotationItem'\n\ninterface AnnotationListProps {\n  rois: dmv.roi.ROI[]\n  selectedRoiUIDs: Set<string>\n  visibleRoiUIDs: Set<string>\n  onVisibilityChange: ({ roiUID, isVisible }: {\n    roiUID: string\n    isVisible: boolean\n  }) => void\n  onSelection: ({ roiUID }: { roiUID: string }) => void\n}\n\n/**\n * React component representing a list of Region of Interest (ROI)\n * annotations.\n */\nclass AnnotationList extends React.Component<AnnotationListProps, {}> {\n  constructor (props: AnnotationListProps) {\n    super(props)\n    this.handleMenuItemSelection = this.handleMenuItemSelection.bind(this)\n    this.handleVisibilityChange = this.handleVisibilityChange.bind(this)\n  }\n\n  handleVisibilityChange (\n    checked: boolean,\n    event: React.MouseEvent<HTMLButtonElement>\n  ): void {\n    if (checked) {\n      this.props.rois.forEach(roi => {\n        this.props.onVisibilityChange({ roiUID: roi.uid, isVisible: checked })\n      })\n    } else {\n      this.props.visibleRoiUIDs.forEach(roiUID => {\n        this.props.onVisibilityChange({ roiUID, isVisible: checked })\n      })\n    }\n  }\n\n  handleMenuItemSelection (object: any): void {\n    this.props.onSelection({ roiUID: object.key })\n  }\n\n  render (): React.ReactNode {\n    const items = this.props.rois.map((roi, index) => (\n      <AnnotationItem\n        key={roi.uid}\n        roi={roi}\n        index={index}\n        isVisible={this.props.visibleRoiUIDs.has(roi.uid)}\n        onVisibilityChange={this.props.onVisibilityChange}\n      />\n    ))\n\n    return (\n      <>\n        <div style={{ paddingLeft: '14px', paddingTop: '7px', paddingBottom: '7px' }}>\n          <Switch\n            size='small'\n            onChange={this.handleVisibilityChange}\n            checked={this.props.visibleRoiUIDs.size > 0}\n            checkedChildren={<FaEye />}\n            unCheckedChildren={<FaEyeSlash />}\n          />\n        </div>\n        <Menu\n          selectedKeys={[...this.props.selectedRoiUIDs.values()]}\n          onSelect={this.handleMenuItemSelection}\n          onClick={this.handleMenuItemSelection}\n        >\n          {items}\n        </Menu>\n      </>\n    )\n  }\n}\n\nexport default AnnotationList\n","import React from 'react'\nimport {\n  Badge,\n  Button,\n  Col,\n  Divider,\n  InputNumber,\n  Menu,\n  Popover,\n  Row,\n  Select,\n  Slider,\n  Space,\n  Switch\n} from 'antd'\nimport { SettingOutlined } from '@ant-design/icons'\nimport { FaEye, FaEyeSlash } from 'react-icons/fa'\nimport * as dmv from 'dicom-microscopy-viewer'\nimport * as dcmjs from 'dcmjs'\n\nimport Description from './Description'\n\ninterface AnnotationGroupItemProps {\n  annotationGroup: dmv.annotation.AnnotationGroup\n  isVisible: boolean\n  metadata: dmv.metadata.MicroscopyBulkSimpleAnnotations\n  defaultStyle: {\n    opacity: number\n    color: number[]\n  }\n  onVisibilityChange: ({ annotationGroupUID, isVisible }: {\n    annotationGroupUID: string\n    isVisible: boolean\n  }) => void\n  onStyleChange: ({ uid, styleOptions }: {\n    uid: string\n    styleOptions: {\n      opacity?: number\n      color?: number[]\n      limitValues?: number[]\n      measurement?: dcmjs.sr.coding.CodedConcept\n    }\n  }) => void\n}\n\ninterface AnnotationGroupItemState {\n  isVisible: boolean\n  currentStyle: {\n    opacity: number\n    color?: number[]\n    limitValues?: number[]\n    measurement?: dcmjs.sr.coding.CodedConcept\n  }\n}\n\n/**\n * React component representing an Annotation Group.\n */\nclass AnnotationGroupItem extends React.Component<AnnotationGroupItemProps, AnnotationGroupItemState> {\n  constructor (props: AnnotationGroupItemProps) {\n    super(props)\n    this.handleVisibilityChange = this.handleVisibilityChange.bind(this)\n    this.handleMeasurementSelection = this.handleMeasurementSelection.bind(this)\n    this.handleOpacityChange = this.handleOpacityChange.bind(this)\n    this.handleColorRChange = this.handleColorRChange.bind(this)\n    this.handleColorGChange = this.handleColorGChange.bind(this)\n    this.handleColorBChange = this.handleColorBChange.bind(this)\n    this.getCurrentColor = this.getCurrentColor.bind(this)\n    this.state = {\n      isVisible: this.props.isVisible,\n      currentStyle: {\n        opacity: this.props.defaultStyle.opacity,\n        color: this.props.defaultStyle.color\n      }\n    }\n  }\n\n  handleVisibilityChange (\n    checked: boolean,\n    event: React.MouseEvent<HTMLButtonElement>\n  ): void {\n    this.props.onVisibilityChange({\n      annotationGroupUID: this.props.annotationGroup.uid,\n      isVisible: checked\n    })\n    this.setState({ isVisible: checked })\n  }\n\n  handleOpacityChange (value: number | null): void {\n    if (value != null) {\n      this.props.onStyleChange({\n        uid: this.props.annotationGroup.uid,\n        styleOptions: {\n          opacity: value\n        }\n      })\n      this.setState({\n        currentStyle: {\n          opacity: value,\n          color: this.state.currentStyle.color,\n          limitValues: this.state.currentStyle.limitValues\n        }\n      })\n    }\n  }\n\n  handleColorRChange (\n    value: number | number[] | null\n  ): void {\n    if (value != null && this.state.currentStyle.color !== undefined) {\n      const color = [\n        Array.isArray(value) ? value[0] : value,\n        this.state.currentStyle.color[1],\n        this.state.currentStyle.color[2]\n      ]\n      this.setState(state => ({\n        currentStyle: {\n          color: color,\n          opacity: state.currentStyle.opacity,\n          limitValues: state.currentStyle.limitValues\n        }\n      }))\n      this.props.onStyleChange({\n        uid: this.props.annotationGroup.uid,\n        styleOptions: { color: color }\n      })\n    }\n  }\n\n  handleColorGChange (\n    value: number | number[] | null\n  ): void {\n    if (value != null && this.state.currentStyle.color !== undefined) {\n      const color = [\n        this.state.currentStyle.color[0],\n        Array.isArray(value) ? value[0] : value,\n        this.state.currentStyle.color[2]\n      ]\n      this.setState(state => ({\n        currentStyle: {\n          color: color,\n          opacity: state.currentStyle.opacity,\n          limitValues: state.currentStyle.limitValues\n        }\n      }))\n      this.props.onStyleChange({\n        uid: this.props.annotationGroup.uid,\n        styleOptions: { color: color }\n      })\n    }\n  }\n\n  handleColorBChange (\n    value: number | number[] | null\n  ): void {\n    if (value != null && this.state.currentStyle.color !== undefined) {\n      const color = [\n        this.state.currentStyle.color[0],\n        this.state.currentStyle.color[1],\n        Array.isArray(value) ? value[0] : value\n      ]\n      this.setState(state => ({\n        currentStyle: {\n          color: color,\n          opacity: state.currentStyle.opacity,\n          limitValues: state.currentStyle.limitValues\n        }\n      }))\n      this.props.onStyleChange({\n        uid: this.props.annotationGroup.uid,\n        styleOptions: { color: color }\n      })\n    }\n  }\n\n  getCurrentColor (): string {\n    const rgb2hex = (values: number[]): string => {\n      const r = values[0]\n      const g = values[1]\n      const b = values[2]\n      return '#' + (0x1000000 + (r << 16) + (g << 8) + b).toString(16).slice(1)\n    }\n\n    if (this.state.currentStyle.color != null) {\n      return rgb2hex(this.state.currentStyle.color)\n    } else {\n      return 'white'\n    }\n  }\n\n  handleLowerLimitChange (\n    value: number | null\n  ): void {\n    if (value != null && this.state.currentStyle.limitValues !== undefined) {\n      this.setState(state => {\n        if (state.currentStyle.limitValues !== undefined) {\n          return {\n            currentStyle: {\n              color: state.currentStyle.color,\n              opacity: state.currentStyle.opacity,\n              limitValues: [value, state.currentStyle.limitValues[1]]\n            }\n          }\n        } else {\n          return {\n            currentStyle: {\n              color: state.currentStyle.color,\n              opacity: state.currentStyle.opacity,\n              limitValues: state.currentStyle.limitValues\n            }\n          }\n        }\n      })\n      this.props.onStyleChange({\n        uid: this.props.annotationGroup.uid,\n        styleOptions: {\n          limitValues: [\n            value,\n            this.state.currentStyle.limitValues[1]\n          ]\n        }\n      })\n    }\n  }\n\n  handleUpperLimitChange (\n    value: number | null\n  ): void {\n    if (value != null && this.state.currentStyle.limitValues !== undefined) {\n      this.setState(state => {\n        if (state.currentStyle.limitValues !== undefined) {\n          return {\n            currentStyle: {\n              color: state.currentStyle.color,\n              opacity: state.currentStyle.opacity,\n              limitValues: [state.currentStyle.limitValues[0], value]\n            }\n          }\n        } else {\n          return {\n            currentStyle: {\n              color: state.currentStyle.color,\n              opacity: state.currentStyle.opacity,\n              limitValues: state.currentStyle.limitValues\n            }\n          }\n        }\n      })\n      this.props.onStyleChange({\n        uid: this.props.annotationGroup.uid,\n        styleOptions: {\n          limitValues: [\n            this.state.currentStyle.limitValues[0],\n            value\n          ]\n        }\n      })\n    }\n  }\n\n  handleLimitChange (\n    values: number[]\n  ): void {\n    this.setState(state => ({\n      currentStyle: {\n        color: state.currentStyle.color,\n        opacity: state.currentStyle.opacity,\n        limitValues: values\n      }\n    }))\n    this.props.onStyleChange({\n      uid: this.props.annotationGroup.uid,\n      styleOptions: { limitValues: values }\n    })\n  }\n\n  handleMeasurementSelection (value?: string, option?: any): void {\n    if (value != null && option.children != null) {\n      const codeComponents = value.split('-')\n      const measurement = new dcmjs.sr.coding.CodedConcept({\n        value: codeComponents[1],\n        schemeDesignator: codeComponents[0],\n        meaning: option.children\n      })\n      this.props.onStyleChange({\n        uid: this.props.annotationGroup.uid,\n        styleOptions: { measurement }\n      })\n      this.setState(state => ({\n        currentStyle: {\n          opacity: state.currentStyle.opacity,\n          measurement\n        }\n      }))\n    } else {\n      this.props.onStyleChange({\n        uid: this.props.annotationGroup.uid,\n        styleOptions: {\n          color: this.props.defaultStyle.color\n        }\n      })\n      this.setState(state => ({\n        currentStyle: {\n          opacity: state.currentStyle.opacity,\n          color: this.props.defaultStyle.color,\n          limitValues: undefined\n        }\n      }))\n    }\n  }\n\n  render (): React.ReactNode {\n    const index = this.props.metadata.AnnotationGroupSequence.findIndex(\n      item => (item.AnnotationGroupUID === this.props.annotationGroup.uid)\n    )\n    const item = this.props.metadata.AnnotationGroupSequence[index]\n    const attributes: Array<{ name: string, value: string }> = [\n      {\n        name: 'Property type',\n        value: this.props.annotationGroup.propertyType.CodeMeaning\n      },\n      {\n        name: 'Property category',\n        value: this.props.annotationGroup.propertyCategory.CodeMeaning\n      },\n      // {\n      //   name: 'Algorithm Name',\n      //   value: this.props.annotationGroup.algorithmName\n      // },\n      {\n        name: 'Graphic type',\n        value: item.GraphicType\n      },\n      {\n        name: 'Annotation coordinate type',\n        value: this.props.metadata.AnnotationCoordinateType\n      }\n    ]\n\n    const measurementsSequence = item.MeasurementsSequence ?? []\n    const measurementOptions = measurementsSequence.map((measurementItem, i) => {\n      const name = measurementItem.ConceptNameCodeSequence[0]\n      return (\n        <Select.Option\n          key={i}\n          value={`${name.CodingSchemeDesignator}-${name.CodeValue}`}\n          dropdownMatchSelectWidth={false}\n          size='small'\n          disabled={!this.props.isVisible}\n        >\n          {name.CodeMeaning}\n        </Select.Option>\n      )\n    })\n    measurementOptions.push(\n      <Select.Option\n        key='-'\n        value={undefined}\n        dropdownMatchSelectWidth={false}\n        size='small'\n        disabled={!this.props.isVisible}\n      >\n        <></>\n      </Select.Option>\n    )\n\n    let colorSettings\n    if (this.state.currentStyle.color != null) {\n      colorSettings = (\n        <>\n          <Divider plain>\n            Color\n          </Divider>\n          <Row justify='center' align='middle' gutter={[8, 8]}>\n            <Col span={5}>\n              Red\n            </Col>\n            <Col span={14}>\n              <Slider\n                range={false}\n                min={0}\n                max={255}\n                step={1}\n                value={this.state.currentStyle.color[0]}\n                onChange={this.handleColorRChange}\n              />\n            </Col>\n            <Col span={5}>\n              <InputNumber\n                min={0}\n                max={255}\n                size='small'\n                style={{ width: '65px' }}\n                value={this.state.currentStyle.color[0]}\n                onChange={this.handleColorRChange}\n              />\n            </Col>\n          </Row>\n\n          <Row justify='center' align='middle' gutter={[8, 8]}>\n            <Col span={5}>\n              Green\n            </Col>\n            <Col span={14}>\n              <Slider\n                range={false}\n                min={0}\n                max={255}\n                step={1}\n                value={this.state.currentStyle.color[1]}\n                onChange={this.handleColorGChange}\n              />\n            </Col>\n            <Col span={5}>\n              <InputNumber\n                min={0}\n                max={255}\n                size='small'\n                style={{ width: '65px' }}\n                value={this.state.currentStyle.color[1]}\n                onChange={this.handleColorGChange}\n              />\n            </Col>\n          </Row>\n\n          <Row justify='center' align='middle' gutter={[8, 8]}>\n            <Col span={5}>\n              Blue\n            </Col>\n            <Col span={14}>\n              <Slider\n                range={false}\n                min={0}\n                max={255}\n                step={1}\n                value={this.state.currentStyle.color[2]}\n                onChange={this.handleColorBChange}\n              />\n            </Col>\n            <Col span={5}>\n              <InputNumber\n                min={0}\n                max={255}\n                size='small'\n                style={{ width: '65px' }}\n                value={this.state.currentStyle.color[2]}\n                onChange={this.handleColorBChange}\n              />\n            </Col>\n          </Row>\n          <Divider plain />\n        </>\n      )\n    }\n\n    let windowSettings\n    let explorationSettings\n    if (measurementsSequence.length > 0) {\n      if (this.state.currentStyle.limitValues != null) {\n        // TODO: need to get default min/max values from viewer first\n        const minValue = 0\n        const maxValue = 1000\n        windowSettings = (\n          <>\n            <Divider plain>\n              Values of interest\n            </Divider>\n            <Row justify='center' align='middle' gutter={[8, 8]}>\n              <Col span={6}>\n                <InputNumber\n                  min={0}\n                  max={this.state.currentStyle.limitValues[1]}\n                  size='small'\n                  style={{ width: '75px' }}\n                  value={this.state.currentStyle.limitValues[0]}\n                  onChange={this.handleLowerLimitChange}\n                />\n              </Col>\n              <Col span={12}>\n                <Slider\n                  range\n                  min={minValue}\n                  max={maxValue}\n                  step={1}\n                  value={[\n                    this.state.currentStyle.limitValues[0],\n                    this.state.currentStyle.limitValues[1]\n                  ]}\n                  onChange={this.handleLimitChange}\n                />\n              </Col>\n              <Col span={6}>\n                <InputNumber\n                  min={this.state.currentStyle.limitValues[0]}\n                  max={maxValue}\n                  size='small'\n                  style={{ width: '75px' }}\n                  value={this.state.currentStyle.limitValues[1]}\n                  onChange={this.handleUpperLimitChange}\n                />\n              </Col>\n            </Row>\n          </>\n        )\n      }\n      explorationSettings = (\n        <>\n          <Divider plain>\n            Exploration\n          </Divider>\n          <Row justify='start' align='middle' gutter={[8, 8]}>\n            <Col span={8}>\n              Measurement\n            </Col>\n            <Col span={16}>\n              <Select\n                style={{ minWidth: '65px', width: '90%' }}\n                onSelect={this.handleMeasurementSelection}\n                key='annotation-group-measurements'\n                defaultValue={undefined}\n              >\n                {measurementOptions}\n              </Select>\n            </Col>\n          </Row>\n        </>\n      )\n    }\n\n    const settings = (\n      <div>\n        {colorSettings}\n        {windowSettings}\n        <Row justify='start' align='middle' gutter={[8, 8]}>\n          <Col span={6}>\n            Opacity\n          </Col>\n          <Col span={12}>\n            <Slider\n              range={false}\n              min={0}\n              max={1}\n              step={0.01}\n              value={this.state.currentStyle.opacity}\n              onChange={this.handleOpacityChange}\n            />\n          </Col>\n          <Col span={6}>\n            <InputNumber\n              min={0}\n              max={1}\n              size='small'\n              step={0.1}\n              style={{ width: '65px' }}\n              value={this.state.currentStyle.opacity}\n              onChange={this.handleOpacityChange}\n            />\n          </Col>\n        </Row>\n        {explorationSettings}\n      </div>\n    )\n\n    const color = this.getCurrentColor()\n    const isBadgeVisible = (\n      this.state.isVisible && this.state.currentStyle.measurement == null\n    )\n    const {\n      annotationGroup,\n      defaultStyle,\n      isVisible,\n      metadata,\n      onVisibilityChange,\n      onStyleChange,\n      ...otherProps\n    } = this.props\n    return (\n      <Menu.Item\n        style={{ height: '100%', paddingLeft: '3px' }}\n        key={this.props.annotationGroup.uid}\n        {...otherProps}\n      >\n        <Space align='start'>\n          <div style={{ paddingLeft: '14px' }}>\n            <Space direction='vertical' align='end'>\n              <Switch\n                size='small'\n                onChange={this.handleVisibilityChange}\n                checked={this.props.isVisible}\n                checkedChildren={<FaEye />}\n                unCheckedChildren={<FaEyeSlash />}\n              />\n              <Popover\n                placement='left'\n                content={settings}\n                overlayStyle={{ width: '350px' }}\n                title='Display Settings'\n              >\n                <Button\n                  type='primary'\n                  shape='circle'\n                  icon={<SettingOutlined />}\n                />\n              </Popover>\n            </Space>\n          </div>\n          <Badge\n            offset={[-20, 20]}\n            count={' '}\n            style={{\n              borderStyle: 'solid',\n              borderWidth: '1px',\n              borderColor: 'gray',\n              visibility: isBadgeVisible ? 'visible' : 'hidden',\n              backgroundImage: `linear-gradient(to bottom, ${color}, ${color}`\n            }}\n          >\n            <Description\n              header={this.props.annotationGroup.label}\n              attributes={attributes}\n              selectable\n              hasLongValues\n            />\n          </Badge>\n        </Space>\n      </Menu.Item>\n    )\n  }\n}\n\nexport default AnnotationGroupItem\n","import React from 'react'\nimport { Menu } from 'antd'\nimport * as dmv from 'dicom-microscopy-viewer'\nimport * as dcmjs from 'dcmjs'\n\nimport AnnotationGroupItem from './AnnotationGroupItem'\n\ninterface AnnotationGroupListProps {\n  annotationGroups: dmv.annotation.AnnotationGroup[]\n  visibleAnnotationGroupUIDs: Set<string>\n  metadata: {\n    [annotationGroupUID: string]: dmv.metadata.MicroscopyBulkSimpleAnnotations\n  }\n  defaultAnnotationGroupStyles: {\n    [annotationGroupUID: string]: {\n      opacity: number\n      color: number[]\n    }\n  }\n  onAnnotationGroupVisibilityChange: ({ annotationGroupUID, isVisible }: {\n    annotationGroupUID: string\n    isVisible: boolean\n  }) => void\n  onAnnotationGroupStyleChange: ({ uid, styleOptions }: {\n    uid: string\n    styleOptions: {\n      opacity?: number\n      color?: number[]\n      measurement?: dcmjs.sr.coding.CodedConcept\n    }\n  }) => void\n}\n\n/**\n * React component representing a list of Annotation Groups.\n */\nclass AnnotationGroupList extends React.Component<AnnotationGroupListProps, {}> {\n  render (): React.ReactNode {\n    const items = this.props.annotationGroups.map((annotationGroup, index) => {\n      const uid = annotationGroup.uid\n      return (\n        <AnnotationGroupItem\n          key={annotationGroup.uid}\n          annotationGroup={annotationGroup}\n          metadata={this.props.metadata[uid]}\n          isVisible={this.props.visibleAnnotationGroupUIDs.has(uid)}\n          defaultStyle={this.props.defaultAnnotationGroupStyles[uid]}\n          onVisibilityChange={this.props.onAnnotationGroupVisibilityChange}\n          onStyleChange={this.props.onAnnotationGroupStyleChange}\n        />\n      )\n    })\n\n    return (\n      <Menu selectable={false}>\n        {items}\n      </Menu>\n    )\n  }\n}\n\nexport default AnnotationGroupList\n","import React from 'react'\nimport { Button as Btn, Divider, Tooltip } from 'antd'\n\ninterface ButtonProps {\n  icon: any\n  tooltip?: string\n  label?: string\n  onClick?: (options: any) => void\n  isSelected?: boolean\n}\n\n/**\n * React component for a button.\n */\nclass Button extends React.Component<ButtonProps, {}> {\n  constructor (props: ButtonProps) {\n    super(props)\n    this.handleClick = this.handleClick.bind(this)\n  }\n\n  handleClick (event: React.SyntheticEvent): void {\n    if (this.props.onClick !== undefined) {\n      this.props.onClick(event)\n    }\n  }\n\n  render (): React.ReactNode {\n    const Icon = this.props.icon\n    if (Icon === undefined) {\n      return null\n    }\n\n    let text\n    if (this.props.label != null) {\n      text = (\n        <>\n          <Divider type='vertical' />\n          {this.props.label}\n        </>\n      )\n    }\n\n    let button\n    if (this.props.isSelected ?? false) {\n      button = (\n        <Btn\n          onClick={this.handleClick}\n          icon={<Icon />}\n          type='primary'\n          style={{ lineHeight: '1.0' }}\n        >\n          {text}\n        </Btn>\n      )\n    } else {\n      button = (\n        <Btn\n          onClick={this.handleClick}\n          icon={<Icon />}\n          type='default'\n          style={{ lineHeight: '1.0' }}\n        >\n          {text}\n        </Btn>\n      )\n    }\n\n    if (this.props.tooltip !== undefined) {\n      return (\n        <Tooltip title={this.props.tooltip}>\n          {button}\n        </Tooltip>\n      )\n    } else {\n      return button\n    }\n  }\n}\n\nexport default Button\n","import React from 'react'\nimport * as dmv from 'dicom-microscopy-viewer'\n\nimport Description from './Description'\n\ninterface EquipmentProps {\n  metadata?: dmv.metadata.VLWholeSlideMicroscopyImage\n}\n\n/**\n * React component representing a list of DICOM Equipment Entities.\n */\nclass Equipment extends React.Component<EquipmentProps, {}> {\n  render (): React.ReactNode {\n    if (this.props.metadata === undefined) {\n      return null\n    }\n    const attributes = [\n      {\n        name: 'Manufacturer',\n        value: this.props.metadata.Manufacturer\n      },\n      {\n        name: 'Model Name',\n        value: this.props.metadata.ManufacturerModelName\n      },\n      {\n        name: 'Device Serial Number',\n        value: this.props.metadata.DeviceSerialNumber\n      },\n      {\n        name: 'Software Versions',\n        value: this.props.metadata.SoftwareVersions\n      }\n    ]\n    if (this.props.metadata.InstitutionName != null) {\n      attributes.push({\n        name: 'Institution Name',\n        value: this.props.metadata.InstitutionName\n      })\n    }\n    return <Description attributes={attributes} hasLongValues />\n  }\n}\n\nexport default Equipment\n","import * as dcmjs from 'dcmjs'\n\n/**\n * Check whether a DICOM SR content item has a given name.\n *\n * @param item - Content item\n * @param name - Coded name that should be compared\n * @returns Whether the content item has the given name\n */\nconst hasName = (\n  item: dcmjs.sr.valueTypes.ContentItem,\n  name: dcmjs.sr.coding.CodedConcept\n): boolean => {\n  const concept = item.ConceptNameCodeSequence[0]\n  return (\n    concept.CodeValue === name.CodeValue &&\n    concept.CodingSchemeDesignator === name.CodingSchemeDesignator\n  )\n}\n\n/**\n * Check whether a DICOM SR content item has a given value type.\n *\n * @param item - Content item\n * @param valueType - Value Type\n * @returns Whether the content item has the given value type\n */\nconst hasValueType = (\n  item: dcmjs.sr.valueTypes.ContentItem,\n  valueType: dcmjs.sr.valueTypes.ValueTypes\n): boolean => {\n  console.log(item.ValueType, valueType)\n  return item.ValueType === valueType\n}\n\n/**\n * Find content items in a DICOM SR document given their name.\n *\n * Only finds content items at the root level, but not any nested content items.\n *\n * @param content - Document content, i.e., sequence of content items\n * @param name - Coded name that should be compared\n * @returns Matched content items\n */\nexport const findContentItemsByName = (\n  { content, name }: {\n    content: dcmjs.sr.valueTypes.ContentItem[]\n    name: dcmjs.sr.coding.CodedConcept\n  }\n): dcmjs.sr.valueTypes.ContentItem[] => {\n  const items: dcmjs.sr.valueTypes.ContentItem[] = []\n  content.forEach(i => {\n    if (hasName(i, name)) {\n      items.push(i)\n    }\n  })\n  return items\n}\n\n/**\n * Find content items in a DICOM SR document given their value type.\n *\n * Only finds content items at the root level, but not any nested content items.\n *\n * @param content - Document content, i.e., sequence of content items\n * @param valueType - Value Type\n * @returns Matched content items\n */\nexport const findContentItemsByValueType = (\n  { content, valueType }: {\n    content: dcmjs.sr.valueTypes.ContentItem[]\n    valueType: dcmjs.sr.valueTypes.ValueTypes\n  }\n): dcmjs.sr.valueTypes.ContentItem[] => {\n  const items: dcmjs.sr.valueTypes.ContentItem[] = []\n  content.forEach(i => {\n    if (hasValueType(i, valueType)) {\n      items.push(i)\n    }\n  })\n  return items\n}\n","import React from 'react'\nimport * as dmv from 'dicom-microscopy-viewer'\nimport * as dcmjs from 'dcmjs'\nimport { Divider } from 'antd'\nimport { v4 as generateUUID } from 'uuid'\n\nimport Description from './Description'\nimport Patient from './Patient'\nimport Study from './Study'\nimport { findContentItemsByName } from '../utils/sr'\nimport { CustomError, errorTypes } from '../utils/CustomError'\nimport NotificationMiddleware, {\n  NotificationMiddlewareContext\n} from '../services/NotificationMiddleware'\n\nexport const hasValueType = (\n  item: dcmjs.sr.valueTypes.ContentItem,\n  valueType: string\n): boolean => {\n  return item.ValueType === valueType\n}\n\nconst findMeasurementItems = (\n  { content }: { content: dcmjs.sr.valueTypes.ContentItem[] }\n): dcmjs.sr.valueTypes.NumContentItem[] => {\n  const items: dcmjs.sr.valueTypes.NumContentItem[] = []\n  content.forEach(i => {\n    if (hasValueType(i, dcmjs.sr.valueTypes.ValueTypes.NUM)) {\n      const measurement = i as dcmjs.sr.valueTypes.NumContentItem\n      items.push(measurement)\n    }\n  })\n  return items\n}\n\nconst findEvaluationItems = (\n  { content }: { content: dcmjs.sr.valueTypes.ContentItem[] }\n): dcmjs.sr.valueTypes.CodeContentItem[] => {\n  const items: dcmjs.sr.valueTypes.CodeContentItem[] = []\n  content.forEach(i => {\n    if (hasValueType(i, dcmjs.sr.valueTypes.ValueTypes.CODE)) {\n      const evaluation = i as dcmjs.sr.valueTypes.CodeContentItem\n      items.push(evaluation)\n    }\n  })\n  return items\n}\n\nconst getROIs = (report: dmv.metadata.Comprehensive3DSR): dmv.roi.ROI[] => {\n  // TID 1500 Measurement Report\n  const matches = findContentItemsByName({\n    content: report.ContentSequence,\n    name: new dcmjs.sr.coding.CodedConcept({\n      value: '126010',\n      schemeDesignator: 'DCM',\n      meaning: 'Imaging Measurements'\n    })\n  })\n  if (matches.length !== 1) {\n    NotificationMiddleware.onError(\n      NotificationMiddlewareContext.SLIM,\n      new CustomError(\n        errorTypes.ENCODINGANDDECODING,\n        'Content item \"Imaging Measurements\" not found.' +\n        'Content of Comprehensive 3D SR document is not structured based on ' +\n        'TID 1500 \"Measurement Report\".'\n      )\n    )\n  }\n  const measurementsItem = matches[0] as dcmjs.sr.valueTypes.ContainerContentItem\n  // TID 1410 Planar ROI Measurements and Qualitative Evaluations\n  const measurementGroupItems = findContentItemsByName({\n    content: measurementsItem.ContentSequence,\n    name: new dcmjs.sr.coding.CodedConcept({\n      value: '125007',\n      schemeDesignator: 'DCM',\n      meaning: 'Measurement Group'\n    })\n  })\n\n  const rois: dmv.roi.ROI[] = []\n  measurementGroupItems.forEach((item) => {\n    const evaluations = []\n    let observerType: string\n    const group = item as dcmjs.sr.valueTypes.ContainerContentItem\n    let items = findContentItemsByName({\n      content: group.ContentSequence,\n      name: new dcmjs.sr.coding.CodedConcept({\n        value: '112040',\n        schemeDesignator: 'DCM',\n        meaning: 'Tracking Unique Identifier'\n      })\n    })\n    if (items.length === 0) {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.ENCODINGANDDECODING,\n          'Content item \"Tracking Unique Identifier\" not found. ' +\n          'Content of Comprehensive 3D SR document is not structured ' +\n          'based on TID 1500 \"Measurement Report\" -> ' +\n          'TID 1410 \"Planar ROI Measurements and Qualitative Evaluations\".'\n        )\n      )\n    }\n    const trackingUIDItem = items[0] as dcmjs.sr.valueTypes.UIDRefContentItem\n\n    items = findContentItemsByName({\n      content: group.ContentSequence,\n      name: new dcmjs.sr.coding.CodedConcept({\n        value: '121071',\n        schemeDesignator: 'DCM',\n        meaning: 'Finding'\n      })\n    })\n    if (items.length === 0) {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.ENCODINGANDDECODING,\n          'Content item \"Finding\" not found. ' +\n          'Content of Comprehensive 3D SR document is not structured ' +\n          'based on TID 1500 \"Measurement Report\" -> ' +\n          'TID 1410 \"Planar ROI Measurements and Qualitative Evaluations\".'\n        )\n      )\n    }\n\n    items = findContentItemsByName({\n      content: group.ContentSequence,\n      name: new dcmjs.sr.coding.CodedConcept({\n        value: '111001',\n        schemeDesignator: 'DCM',\n        meaning: 'Algorithm Name'\n      })\n    })\n    if (items.length !== 0) {\n      const algorithmNameItem = items[0] as dcmjs.sr.valueTypes.CodeContentItem\n      evaluations.push(algorithmNameItem)\n      observerType = 'Device'\n    } else {\n      observerType = 'Person'\n    }\n\n    items = findContentItemsByName({\n      content: group.ContentSequence,\n      name: new dcmjs.sr.coding.CodedConcept({\n        value: '111003',\n        schemeDesignator: 'DCM',\n        meaning: 'Algorithm Version'\n      })\n    })\n    if (items.length !== 0) {\n      const algorithmVersionItem = items[0] as dcmjs.sr.valueTypes.CodeContentItem\n      evaluations.push(algorithmVersionItem)\n    }\n\n    items = findContentItemsByName({\n      content: group.ContentSequence,\n      name: new dcmjs.sr.coding.CodedConcept({\n        value: '111030',\n        schemeDesignator: 'DCM',\n        meaning: 'Image Region'\n      })\n    })\n    if (items.length === 0) {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.ENCODINGANDDECODING,\n          'Content item \"Image Region\" not found. ' +\n          'Content of Comprehensive 3D SR document is not structured ' +\n          'based on TID 1500 \"Measurement Report\" -> ' +\n          'TID 1410 \"Planar ROI Measurements and Qualitative Evaluations\".'\n        )\n      )\n    }\n    const regionItem = items[0] as dcmjs.sr.valueTypes.Scoord3DContentItem\n    let scoord3d: any\n    if (regionItem.GraphicType === 'POINT') {\n      scoord3d = new dmv.scoord3d.Point({\n        frameOfReferenceUID: regionItem.ReferencedFrameOfReferenceUID,\n        coordinates: regionItem.GraphicData\n      })\n    } else {\n      const coordinates: number[][] = []\n      for (let i = 0; i < regionItem.GraphicData.length; i += 3) {\n        coordinates.push(regionItem.GraphicData.slice(i, i + 3))\n      }\n      if (regionItem.GraphicType === 'POLYGON') {\n        scoord3d = new dmv.scoord3d.Polygon({\n          frameOfReferenceUID: regionItem.ReferencedFrameOfReferenceUID,\n          coordinates: coordinates\n        })\n      } else if (regionItem.GraphicType === 'MULTIPOINT') {\n        scoord3d = new dmv.scoord3d.MultiPoint({\n          frameOfReferenceUID: regionItem.ReferencedFrameOfReferenceUID,\n          coordinates: coordinates\n        })\n      } else if (regionItem.GraphicType === 'POLYLINE') {\n        scoord3d = new dmv.scoord3d.Polyline({\n          frameOfReferenceUID: regionItem.ReferencedFrameOfReferenceUID,\n          coordinates: coordinates\n        })\n      } else if (regionItem.GraphicType === 'ELLIPSE') {\n        scoord3d = new dmv.scoord3d.Ellipse({\n          frameOfReferenceUID: regionItem.ReferencedFrameOfReferenceUID,\n          coordinates: coordinates\n        })\n      } else if (regionItem.GraphicType === 'ELLIPSOID') {\n        scoord3d = new dmv.scoord3d.Ellipsoid({\n          frameOfReferenceUID: regionItem.ReferencedFrameOfReferenceUID,\n          coordinates: coordinates\n        })\n      } else {\n        NotificationMiddleware.onError(\n          NotificationMiddlewareContext.SLIM,\n          new CustomError(\n            errorTypes.ENCODINGANDDECODING,\n            'Content item \"Image Region\" has unknown graphic type ' +\n            `\"${regionItem.GraphicType}\". ` +\n            'Content of Comprehensive 3D SR document is not structured ' +\n            'based on TID 1500 \"Measurement Report\" -> ' +\n            'TID 1410 \"Planar ROI Measurements and Qualitative Evaluations\".'\n          )\n        )\n      }\n    }\n\n    evaluations.push(\n      ...findEvaluationItems({ content: group.ContentSequence })\n    )\n    const measurements = findMeasurementItems({\n      content: group.ContentSequence\n    })\n\n    const roi = new dmv.roi.ROI({\n      scoord3d: scoord3d,\n      uid: generateUUID(),\n      properties: {\n        trackingUID: trackingUIDItem.UID,\n        observerType: observerType,\n        evaluations: evaluations,\n        measurements: measurements\n      }\n    })\n    rois.push(roi)\n  })\n  return rois\n}\n\nclass MeasurementReport {\n  public PersonObserverName?: string\n\n  public PersonObserverLoginName?: string\n\n  public DeviceObserverUID?: string\n\n  public DeviceObserverName?: string\n\n  public SpecimenUID: string\n\n  public SpecimenIdentifier: string\n\n  public ContainerIdentifier: string\n\n  public ROIs: dmv.roi.ROI[] = []\n\n  constructor (report: dmv.metadata.Comprehensive3DSR) {\n    let items = findContentItemsByName({\n      content: report.ContentSequence,\n      name: new dcmjs.sr.coding.CodedConcept({\n        value: '121039',\n        schemeDesignator: 'DCM',\n        meaning: 'Specimen UID'\n      })\n    })\n    if (items.length === 0) {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.ENCODINGANDDECODING,\n          'Content item \"Specimen UID\" not found. ' +\n          'Content of Comprehensive 3D SR document is not structured based on ' +\n          'TID 1500 \"Measurement Report\" -> TID 1001 \"Observation Context\" -> ' +\n          'TID 1006 \"Subject Context\" -> TID 1009 \"Subject Context, Specimen\".'\n        )\n      )\n    }\n    const specimenUIDItem = (\n      items[0] as unknown as dcmjs.sr.valueTypes.UIDRefContentItem\n    )\n    this.SpecimenUID = specimenUIDItem.UID\n\n    items = findContentItemsByName({\n      content: report.ContentSequence,\n      name: new dcmjs.sr.coding.CodedConcept({\n        value: '121041',\n        schemeDesignator: 'DCM',\n        meaning: 'Specimen Identifier'\n      })\n    })\n    if (items.length === 0) {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.ENCODINGANDDECODING,\n          'Content item \"Specimen Identifier\" not found. ' +\n          'Content of Comprehensive 3D SR document is not structured based on ' +\n          'TID 1500 \"Measurement Report\" -> TID 1001 \"Observation Context\" -> ' +\n          'TID 1006 \"Subject Context\" -> TID 1009 \"Subject Context, Specimen\".'\n        )\n      )\n    }\n    const specimenIdItem = (\n      items[0] as unknown as dcmjs.sr.valueTypes.TextContentItem\n    )\n    this.SpecimenIdentifier = specimenIdItem.TextValue\n\n    items = findContentItemsByName({\n      content: report.ContentSequence,\n      name: new dcmjs.sr.coding.CodedConcept({\n        value: '111700',\n        schemeDesignator: 'DCM',\n        meaning: 'Specimen Container Identifier'\n      })\n    })\n    if (items.length === 0) {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.ENCODINGANDDECODING,\n          'Content item \"Specimen Container Identifier\" not found. ' +\n          'Content of Comprehensive 3D SR document is not structured based on ' +\n          'TID 1500 \"Measurement Report\" -> TID 1001 \"Observation Context\" -> ' +\n          'TID 1006 \"Subject Context\" -> TID 1009 \"Subject Context, Specimen\".'\n        )\n      )\n    }\n    const containerIdItem = (\n      items[0] as unknown as dcmjs.sr.valueTypes.TextContentItem\n    )\n    this.ContainerIdentifier = containerIdItem.TextValue\n\n    items = findContentItemsByName({\n      content: report.ContentSequence,\n      name: new dcmjs.sr.coding.CodedConcept({\n        value: '121008',\n        schemeDesignator: 'DCM',\n        meaning: 'Person Observer Name'\n      })\n    })\n    if (items.length !== 0) {\n      const personNameItem = (\n        items[0] as unknown as dcmjs.sr.valueTypes.PNameContentItem\n      )\n      this.PersonObserverName = personNameItem.PersonName\n    }\n\n    items = findContentItemsByName({\n      content: report.ContentSequence,\n      name: new dcmjs.sr.coding.CodedConcept({\n        value: '128774',\n        schemeDesignator: 'DCM',\n        meaning: \"Person Observer's Login Name\"\n      })\n    })\n    if (items.length !== 0) {\n      const personLoginNameItem = (\n        items[0] as unknown as dcmjs.sr.valueTypes.TextContentItem\n      )\n      this.PersonObserverLoginName = personLoginNameItem.TextValue\n    }\n\n    items = findContentItemsByName({\n      content: report.ContentSequence,\n      name: new dcmjs.sr.coding.CodedConcept({\n        value: '121012',\n        schemeDesignator: 'DCM',\n        meaning: 'Device Observer UID'\n      })\n    })\n    if (items.length > 0) {\n      const deviceUIDItem = (\n        items[0] as unknown as dcmjs.sr.valueTypes.UIDRefContentItem\n      )\n      this.DeviceObserverUID = deviceUIDItem.UID\n    }\n\n    items = findContentItemsByName({\n      content: report.ContentSequence,\n      name: new dcmjs.sr.coding.CodedConcept({\n        value: '121013',\n        schemeDesignator: 'DCM',\n        meaning: 'Device Observer Name'\n      })\n    })\n    if (items.length !== 0) {\n      const deviceNameItem = (\n        items[0] as unknown as dcmjs.sr.valueTypes.TextContentItem\n      )\n      this.DeviceObserverName = deviceNameItem.TextValue\n    }\n\n    this.ROIs = getROIs(report)\n  }\n}\n\ninterface ReportProps {\n  dataset: dmv.metadata.Comprehensive3DSR\n}\n\n/**\n * React component representing a DICOM SR document that displays the\n * document content (a selected subset of content items).\n */\nclass Report extends React.Component<ReportProps, {}> {\n  render (): React.ReactNode {\n    const report = new MeasurementReport(this.props.dataset)\n    const containerAttrs = [\n      {\n        name: 'ID',\n        value: report.ContainerIdentifier\n      }\n    ]\n    const specimenAttrs = [\n      {\n        name: 'ID',\n        value: report.SpecimenIdentifier\n      }\n    ]\n    const observerAttrs = [\n      {\n        name: 'Name',\n        value: report.PersonObserverName\n      }\n    ]\n    const annotations = report.ROIs.map(\n      (roi, index): React.ReactNode => {\n        const id = `Region ${index + 1}`\n        const attrs: Array<{ name: string, value: string }> = []\n        roi.evaluations.forEach((\n          item: (\n            dcmjs.sr.valueTypes.CodeContentItem |\n            dcmjs.sr.valueTypes.TextContentItem\n          )\n        ) => {\n          if (item.ValueType === dcmjs.sr.valueTypes.ValueTypes.CODE) {\n            item = item as dcmjs.sr.valueTypes.CodeContentItem\n            attrs.push({\n              name: item.ConceptNameCodeSequence[0].CodeMeaning,\n              value: item.ConceptCodeSequence[0].CodeMeaning\n            })\n          } else if (item.ValueType === dcmjs.sr.valueTypes.ValueTypes.TEXT) {\n            item = item as dcmjs.sr.valueTypes.TextContentItem\n            attrs.push({\n              name: item.ConceptNameCodeSequence[0].CodeMeaning,\n              value: item.TextValue\n            })\n          }\n        })\n        return <Description key={roi.uid} header={id} attributes={attrs} />\n      }\n    )\n\n    return (\n      <div>\n        <Divider orientation='left'>Patient</Divider>\n        <Patient metadata={this.props.dataset} />\n        <Divider orientation='left'>Case</Divider>\n        <Study metadata={this.props.dataset} />\n        <Divider orientation='left'>Slide</Divider>\n        <Description attributes={containerAttrs} />\n        <Divider orientation='left'>Specimen</Divider>\n        <Description attributes={specimenAttrs} />\n        <Divider orientation='left'>Observer</Divider>\n        <Description attributes={observerAttrs} />\n        <Divider orientation='left'>Annotations</Divider>\n        {annotations}\n      </div>\n    )\n  }\n}\n\nexport default Report\nexport { MeasurementReport }\n","import React from 'react'\nimport { List } from 'antd'\n\nimport Description, { Attribute, AttributeGroup } from './Description'\n\ninterface ItemProps {\n  uid: string\n  identifier: string\n  attributes: Attribute[]\n  groups?: AttributeGroup[]\n  children?: React.ReactElement[]\n  type?: string\n  hasLongValues?: boolean\n}\n\n/**\n * React component for a list item that consists of a header element\n * containing an identifier and a body element containing a description list\n * of attributes rendered as name-value pairs.\n */\nclass Item extends React.Component<ItemProps, {}> {\n  render (): React.ReactNode {\n    let groups = null\n    if (this.props.groups !== undefined) {\n      groups = this.props.groups.map((item, index: number) => (\n        <Description\n          key={index}\n          header={item.name}\n          attributes={item.attributes}\n        />\n      ))\n    }\n    let title\n    if (this.props.type !== undefined) {\n      title = `${this.props.type}: ${this.props.identifier}`\n    } else {\n      title = this.props.identifier\n    }\n    return (\n      <List.Item key={this.props.uid}>\n        <Description\n          header={title}\n          attributes={this.props.attributes}\n          hasLongValues={this.props.hasLongValues}\n        >\n          {groups}\n        </Description>\n        {this.props.children}\n      </List.Item>\n    )\n  }\n}\n\nexport default Item\n","import * as dcmjs from 'dcmjs'\n\nexport const SpecimenPreparationTypes: {\n  [key: string]: dcmjs.sr.coding.CodedConcept\n} = {\n  COLLECTION: new dcmjs.sr.coding.CodedConcept({\n    value: '17636008',\n    schemeDesignator: 'SCT',\n    meaning: 'Specimen collection'\n  }),\n  SAMPLING: new dcmjs.sr.coding.CodedConcept({\n    value: '433465004',\n    schemeDesignator: 'SCT',\n    meaning: 'Sampling of tissue specimen'\n  }),\n  STAINING: new dcmjs.sr.coding.CodedConcept({\n    value: '127790008',\n    schemeDesignator: 'SCT',\n    meaning: 'Specimen staining'\n  }),\n  PROCESSING: new dcmjs.sr.coding.CodedConcept({\n    value: '9265001',\n    schemeDesignator: 'SCT',\n    meaning: 'Specimen processing'\n  })\n}\n\nexport const SpecimenPreparationAdditives: {\n  [key: string]: dcmjs.sr.coding.CodedConcept\n} = {\n  FIXATIVE: new dcmjs.sr.coding.CodedConcept({\n    value: '430864009',\n    schemeDesignator: 'SCT',\n    meaning: 'Tissue fixative'\n  }),\n  EMBEDDING_MEDIUM: new dcmjs.sr.coding.CodedConcept({\n    value: '430863003',\n    schemeDesignator: 'SCT',\n    meaning: 'Embedding medium'\n  })\n}\n\nexport const SpecimenPreparationStepItems: {\n  [key: string]: dcmjs.sr.coding.CodedConcept\n} = {\n  SPECIMEN_IDENTIFIER: new dcmjs.sr.coding.CodedConcept({\n    value: '121041',\n    schemeDesignator: 'DCM',\n    meaning: 'Specimen identifier'\n  }),\n  PARENT_SPECIMEN_IDENTIFIER: new dcmjs.sr.coding.CodedConcept({\n    value: '111705',\n    schemeDesignator: 'DCM',\n    meaning: 'Parent specimen identifier'\n  }),\n  PROCESSING_TYPE: new dcmjs.sr.coding.CodedConcept({\n    value: '111701',\n    schemeDesignator: 'DCM',\n    meaning: 'Processing type'\n  }),\n  DATETIME_OF_PROCESSING: new dcmjs.sr.coding.CodedConcept({\n    value: '111702',\n    schemeDesignator: 'DCM',\n    meaning: 'Datetime of processing'\n  }),\n  PROCESSING_STEP_DESCRIPTION: new dcmjs.sr.coding.CodedConcept({\n    value: '111703',\n    schemeDesignator: 'DCM',\n    meaning: 'Processing step description'\n  }),\n  COLLECTION_METHOD: new dcmjs.sr.coding.CodedConcept({\n    value: '17636008',\n    schemeDesignator: 'SCT',\n    meaning: 'Specimen collection'\n  }),\n  SAMPLING_METHOD: new dcmjs.sr.coding.CodedConcept({\n    value: '111704',\n    schemeDesignator: 'DCM',\n    meaning: 'Sampling method'\n  }),\n  STAIN: new dcmjs.sr.coding.CodedConcept({\n    value: '424361007',\n    schemeDesignator: 'SCT',\n    meaning: 'Using substance'\n  }),\n  ...SpecimenPreparationAdditives\n}\n","import React from 'react'\nimport * as dmv from 'dicom-microscopy-viewer'\nimport * as dcmjs from 'dcmjs'\n\nimport Item from './Item'\nimport { Attribute } from './Description'\nimport { SpecimenPreparationStepItems } from '../data/specimens'\n\ninterface SpecimenItemProps {\n  index: number\n  metadata?: dmv.metadata.VLWholeSlideMicroscopyImage\n  showstain: boolean\n}\n\n/**\n * React component representing a DICOM Specimen Information Entity and\n * displays specimen-related attributes of a DICOM Slide Microscopy image.\n */\nclass SpecimenItem extends React.Component<SpecimenItemProps, {}> {\n  render (): React.ReactNode {\n    if (this.props.metadata === undefined) {\n      return null\n    }\n    const specimenDescription = this.props.metadata.SpecimenDescriptionSequence[\n      this.props.index\n    ]\n    const attributes: Attribute[] = []\n    if (specimenDescription.SpecimenShortDescription !== undefined) {\n      attributes.push({\n        name: 'Description',\n        value: specimenDescription.SpecimenShortDescription\n      })\n    }\n    if (specimenDescription.PrimaryAnatomicStructureSequence !== undefined) {\n      if (specimenDescription.PrimaryAnatomicStructureSequence.length > 0) {\n        const structures = specimenDescription.PrimaryAnatomicStructureSequence\n        attributes.push({\n          name: 'Anatomical structure',\n          value: structures.map(item => item.CodeMeaning).join(', ')\n        })\n      }\n    }\n\n    // TID 8001 \"Specimen Preparation\"\n    const preparationSteps: dmv.metadata.SpecimenPreparation[] = (\n      specimenDescription.SpecimenPreparationSequence ?? []\n    )\n    preparationSteps.forEach(\n      (step: dmv.metadata.SpecimenPreparation, index: number): void => {\n        step.SpecimenPreparationStepContentItemSequence.forEach((\n          item: (\n            dcmjs.sr.valueTypes.CodeContentItem |\n            dcmjs.sr.valueTypes.TextContentItem |\n            dcmjs.sr.valueTypes.UIDRefContentItem |\n            dcmjs.sr.valueTypes.PNameContentItem |\n            dcmjs.sr.valueTypes.DateTimeContentItem\n          ),\n          index: number\n        ) => {\n          const name = new dcmjs.sr.coding.CodedConcept({\n            value: item.ConceptNameCodeSequence[0].CodeValue,\n            schemeDesignator:\n              item.ConceptNameCodeSequence[0].CodingSchemeDesignator,\n            meaning: item.ConceptNameCodeSequence[0].CodeMeaning\n          })\n          if (item.ValueType === dcmjs.sr.valueTypes.ValueTypes.CODE) {\n            item = item as dcmjs.sr.valueTypes.CodeContentItem\n            const value = new dcmjs.sr.coding.CodedConcept({\n              value: item.ConceptCodeSequence[0].CodeValue,\n              schemeDesignator:\n                item.ConceptCodeSequence[0].CodingSchemeDesignator,\n              meaning: item.ConceptCodeSequence[0].CodeMeaning\n            })\n            if (!name.equals(SpecimenPreparationStepItems.PROCESSING_TYPE)) {\n              if (\n                name.equals(SpecimenPreparationStepItems.COLLECTION_METHOD)\n              ) {\n                attributes.push({\n                  name: 'Collection method',\n                  value: value.CodeMeaning\n                })\n              } else if (\n                name.equals(SpecimenPreparationStepItems.FIXATIVE)\n              ) {\n                attributes.push({\n                  name: 'Tissue fixative',\n                  value: value.CodeMeaning\n                })\n              } else if (\n                name.equals(SpecimenPreparationStepItems.EMBEDDING_MEDIUM)\n              ) {\n                attributes.push({\n                  name: 'Tissue embedding medium',\n                  value: value.CodeMeaning\n                })\n              } else if (\n                name.equals(SpecimenPreparationStepItems.STAIN) &&\n                this.props.showstain\n              ) {\n                attributes.push({\n                  name: 'Tissue stain',\n                  value: value.CodeMeaning\n                })\n              }\n            }\n          } else if (item.ValueType === dcmjs.sr.valueTypes.ValueTypes.TEXT) {\n            item = item as dcmjs.sr.valueTypes.TextContentItem\n            if (\n              name.equals(SpecimenPreparationStepItems.STAIN) &&\n              this.props.showstain\n            ) {\n              attributes.push({\n                name: 'Tissue stain',\n                value: item.TextValue\n              })\n            } else if (\n              name.equals(SpecimenPreparationStepItems.PARENT_SPECIMEN_IDENTIFIER)\n            ) {\n              attributes.push({\n                name: 'Parent specimen',\n                value: item.TextValue\n              })\n            }\n          }\n        })\n      }\n    )\n    const uid = specimenDescription.SpecimenUID\n    const identifier = specimenDescription.SpecimenIdentifier\n    return (\n      <Item\n        uid={uid}\n        key={uid}\n        identifier={identifier}\n        attributes={attributes}\n        hasLongValues\n      />\n    )\n  }\n}\n\nexport default SpecimenItem\n","import React from 'react'\nimport * as dmv from 'dicom-microscopy-viewer'\nimport { List } from 'antd'\n\nimport SpecimenItem from './SpecimenItem'\n\ninterface SpecimenListProps {\n  metadata?: dmv.metadata.VLWholeSlideMicroscopyImage\n  showstain: boolean\n}\n\n/**\n * React component representing a list of DICOM Specimen Information Entities.\n */\nclass SpecimenList extends React.Component<SpecimenListProps, {}> {\n  render (): React.ReactNode {\n    if (this.props.metadata === undefined) {\n      return null\n    }\n    /*\n     * Specimen Description Sequence is a type 1 attribute. However, it is\n     * nevertheless missing in some data sets. This is a violation of the\n     * standard, but it may be better to facilitate display of the data.\n     */\n    const descriptions = this.props.metadata.SpecimenDescriptionSequence ?? []\n    const items = descriptions.map(\n      (item: dmv.metadata.SpecimenDescription, index: number) => {\n        return (\n          <SpecimenItem\n            index={index}\n            key={item.SpecimenUID}\n            metadata={this.props.metadata}\n            showstain={this.props.showstain}\n          />\n        )\n      }\n    )\n    return (\n      <List style={{ overflowY: 'auto' }}>\n        {items}\n      </List>\n    )\n  }\n}\n\nexport default SpecimenList\n","import React from 'react'\nimport {\n  Badge,\n  Button,\n  Col,\n  Divider,\n  InputNumber,\n  Menu,\n  Popover,\n  Row,\n  Slider,\n  Space,\n  Switch,\n  Tooltip\n} from 'antd'\nimport {\n  DeleteOutlined,\n  EyeOutlined,\n  EyeInvisibleOutlined,\n  SettingOutlined\n} from '@ant-design/icons'\nimport Description from './Description'\nimport * as dmv from 'dicom-microscopy-viewer'\nimport * as dcmjs from 'dcmjs'\n\nimport { SpecimenPreparationStepItems } from '../data/specimens'\nimport NotificationMiddleware, {\n  NotificationMiddlewareContext\n} from '../services/NotificationMiddleware'\nimport { CustomError, errorTypes } from '../utils/CustomError'\n\ninterface OpticalPathItemProps {\n  opticalPath: dmv.opticalPath.OpticalPath\n  metadata: dmv.metadata.VLWholeSlideMicroscopyImage[]\n  isVisible: boolean\n  isRemovable: boolean\n  defaultStyle: {\n    opacity: number\n    color?: number[]\n    paletteColorLookupTable?: dmv.color.PaletteColorLookupTable\n    limitValues?: number[]\n  }\n  onVisibilityChange: ({ opticalPathIdentifier, isVisible }: {\n    opticalPathIdentifier: string\n    isVisible: boolean\n  }) => void\n  onStyleChange: ({ opticalPathIdentifier, styleOptions }: {\n    opticalPathIdentifier: string\n    styleOptions: {\n      opacity?: number\n      color?: number[]\n      paletteColorLookupTable?: dmv.color.PaletteColorLookupTable\n      limitValues?: number[]\n    }\n  }) => void\n  onRemoval: (opticalPathIdentifier: string) => void\n}\n\ninterface OpticalPathItemState {\n  isVisible: boolean\n  currentStyle: {\n    opacity: number\n    color?: number[]\n    paletteColorLookupTable?: dmv.color.PaletteColorLookupTable\n    limitValues?: number[]\n  }\n}\n\n/**\n * React component representing an optical path of a\n * multi-channel acquistion with control of visualization parameters.\n */\nclass OpticalPathItem extends React.Component<OpticalPathItemProps, OpticalPathItemState> {\n  constructor (props: OpticalPathItemProps) {\n    super(props)\n    this.handleVisibilityChange = this.handleVisibilityChange.bind(this)\n    this.handleOpacityChange = this.handleOpacityChange.bind(this)\n    this.handleLimitChange = this.handleLimitChange.bind(this)\n    this.handleLowerLimitChange = this.handleLowerLimitChange.bind(this)\n    this.handleUpperLimitChange = this.handleUpperLimitChange.bind(this)\n    this.handleColorRChange = this.handleColorRChange.bind(this)\n    this.handleColorGChange = this.handleColorGChange.bind(this)\n    this.handleColorBChange = this.handleColorBChange.bind(this)\n    this.handleRemoval = this.handleRemoval.bind(this)\n    this.getCurrentColors = this.getCurrentColors.bind(this)\n    this.state = {\n      isVisible: this.props.isVisible,\n      currentStyle: {\n        opacity: this.props.defaultStyle.opacity,\n        color: this.props.defaultStyle.color,\n        paletteColorLookupTable: this.props.defaultStyle.paletteColorLookupTable,\n        limitValues: this.props.defaultStyle.limitValues\n      }\n    }\n  }\n\n  componentDidUpdate (\n    previousProps: OpticalPathItemProps,\n    previousState: OpticalPathItemState\n  ): void {\n    if (this.props.defaultStyle !== previousProps.defaultStyle) {\n      this.setState({\n        currentStyle: this.props.defaultStyle\n      })\n    }\n  }\n\n  handleVisibilityChange (\n    checked: boolean,\n    event: React.MouseEvent<HTMLButtonElement>\n  ): void {\n    const identifier = this.props.opticalPath.identifier\n    this.setState({\n      isVisible: checked\n    })\n    this.props.onVisibilityChange({\n      opticalPathIdentifier: identifier,\n      isVisible: checked\n    })\n  }\n\n  handleOpacityChange (\n    value: number | null\n  ): void {\n    if (value != null) {\n      const identifier = this.props.opticalPath.identifier\n      this.props.onStyleChange({\n        opticalPathIdentifier: identifier,\n        styleOptions: { opacity: value }\n      })\n      this.setState(state => ({\n        currentStyle: {\n          color: state.currentStyle.color,\n          paletteColorLookupTable: state.currentStyle.paletteColorLookupTable,\n          opacity: value,\n          limitValues: state.currentStyle.limitValues\n        }\n      }))\n    }\n  }\n\n  handleColorRChange (\n    value: number | number[] | null\n  ): void {\n    const identifier = this.props.opticalPath.identifier\n    if (value != null && this.state.currentStyle.color !== undefined) {\n      const color = [\n        Array.isArray(value) ? value[0] : value,\n        this.state.currentStyle.color[1],\n        this.state.currentStyle.color[2]\n      ]\n      this.setState(state => ({\n        currentStyle: {\n          color: color,\n          paletteColorLookupTable: state.currentStyle.paletteColorLookupTable,\n          opacity: state.currentStyle.opacity,\n          limitValues: state.currentStyle.limitValues\n        }\n      }))\n      this.props.onStyleChange({\n        opticalPathIdentifier: identifier,\n        styleOptions: { color: color }\n      })\n    }\n  }\n\n  handleColorGChange (\n    value: number | number[] | null\n  ): void {\n    const identifier = this.props.opticalPath.identifier\n    if (value != null && this.state.currentStyle.color !== undefined) {\n      const color = [\n        this.state.currentStyle.color[0],\n        Array.isArray(value) ? value[0] : value,\n        this.state.currentStyle.color[2]\n      ]\n      this.setState(state => ({\n        currentStyle: {\n          color: color,\n          paletteColorLookupTable: state.currentStyle.paletteColorLookupTable,\n          opacity: state.currentStyle.opacity,\n          limitValues: state.currentStyle.limitValues\n        }\n      }))\n      this.props.onStyleChange({\n        opticalPathIdentifier: identifier,\n        styleOptions: { color: color }\n      })\n    }\n  }\n\n  handleColorBChange (\n    value: number | number[] | null\n  ): void {\n    const identifier = this.props.opticalPath.identifier\n    if (value != null && this.state.currentStyle.color !== undefined) {\n      const color = [\n        this.state.currentStyle.color[0],\n        this.state.currentStyle.color[1],\n        Array.isArray(value) ? value[0] : value\n      ]\n      this.setState(state => ({\n        currentStyle: {\n          color: color,\n          paletteColorLookupTable: state.currentStyle.paletteColorLookupTable,\n          opacity: state.currentStyle.opacity,\n          limitValues: state.currentStyle.limitValues\n        }\n      }))\n      this.props.onStyleChange({\n        opticalPathIdentifier: identifier,\n        styleOptions: { color: color }\n      })\n    }\n  }\n\n  getCurrentColors (): string[] {\n    const rgb2hex = (values: number[]): string => {\n      const r = values[0]\n      const g = values[1]\n      const b = values[2]\n      return '#' + (0x1000000 + (r << 16) + (g << 8) + b).toString(16).slice(1)\n    }\n\n    if (this.props.defaultStyle.paletteColorLookupTable != null) {\n      const colormap = this.props.defaultStyle.paletteColorLookupTable.data\n      return colormap.map(values => rgb2hex(values))\n    } else if (this.state.currentStyle.color != null) {\n      return [\n        '#000000',\n        rgb2hex(this.state.currentStyle.color)\n      ]\n    } else {\n      return ['white', 'white']\n    }\n  }\n\n  handleLowerLimitChange (\n    value: number | null\n  ): void {\n    const identifier = this.props.opticalPath.identifier\n    if (value != null && this.state.currentStyle.limitValues !== undefined) {\n      this.setState(state => {\n        if (state.currentStyle.limitValues !== undefined) {\n          return {\n            currentStyle: {\n              color: state.currentStyle.color,\n              paletteColorLookupTable: state.currentStyle.paletteColorLookupTable,\n              opacity: state.currentStyle.opacity,\n              limitValues: [value, state.currentStyle.limitValues[1]]\n            }\n          }\n        } else {\n          return {\n            currentStyle: {\n              color: state.currentStyle.color,\n              paletteColorLookupTable: state.currentStyle.paletteColorLookupTable,\n              opacity: state.currentStyle.opacity,\n              limitValues: state.currentStyle.limitValues\n            }\n          }\n        }\n      })\n      this.props.onStyleChange({\n        opticalPathIdentifier: identifier,\n        styleOptions: {\n          limitValues: [\n            value,\n            this.state.currentStyle.limitValues[1]\n          ]\n        }\n      })\n    }\n  }\n\n  handleUpperLimitChange (\n    value: number | null\n  ): void {\n    const identifier = this.props.opticalPath.identifier\n    if (value != null && this.state.currentStyle.limitValues !== undefined) {\n      this.setState(state => {\n        if (state.currentStyle.limitValues !== undefined) {\n          return {\n            currentStyle: {\n              color: state.currentStyle.color,\n              paletteColorLookupTable: state.currentStyle.paletteColorLookupTable,\n              opacity: state.currentStyle.opacity,\n              limitValues: [state.currentStyle.limitValues[0], value]\n            }\n          }\n        } else {\n          return {\n            currentStyle: {\n              color: state.currentStyle.color,\n              paletteColorLookupTable: state.currentStyle.paletteColorLookupTable,\n              opacity: state.currentStyle.opacity,\n              limitValues: state.currentStyle.limitValues\n            }\n          }\n        }\n      })\n      this.props.onStyleChange({\n        opticalPathIdentifier: identifier,\n        styleOptions: {\n          limitValues: [\n            this.state.currentStyle.limitValues[0],\n            value\n          ]\n        }\n      })\n    }\n  }\n\n  handleLimitChange (\n    values: number[]\n  ): void {\n    const identifier = this.props.opticalPath.identifier\n    this.setState(state => ({\n      currentStyle: {\n        color: state.currentStyle.color,\n        paletteColorLookupTable: state.currentStyle.paletteColorLookupTable,\n        opacity: state.currentStyle.opacity,\n        limitValues: values\n      }\n    }))\n    this.props.onStyleChange({\n      opticalPathIdentifier: identifier,\n      styleOptions: { limitValues: values }\n    })\n  }\n\n  handleRemoval (): void {\n    const identifier = this.props.opticalPath.identifier\n    this.props.onRemoval(identifier)\n  }\n\n  render (): React.ReactNode {\n    const identifier = this.props.opticalPath.identifier\n    const description = this.props.opticalPath.description\n    const attributes: Array<{ name: string, value: string }> = []\n    if (this.props.opticalPath.illuminationWaveLength !== undefined) {\n      attributes.push(\n        {\n          name: 'Illumination wavelength',\n          value: `${this.props.opticalPath.illuminationWaveLength} nm`\n        }\n      )\n    }\n    if (this.props.opticalPath.illuminationColor !== undefined) {\n      attributes.push(\n        {\n          name: 'Illumination color',\n          value: this.props.opticalPath.illuminationColor.CodeMeaning\n        }\n      )\n    }\n\n    // TID 8001 \"Specimen Preparation\"\n    const specimenDescriptions: dmv.metadata.SpecimenDescription[] = (\n      this.props.metadata[0].SpecimenDescriptionSequence ?? []\n    )\n    try {\n      specimenDescriptions.forEach(description => {\n        const specimenPreparationSteps: dmv.metadata.SpecimenPreparation[] =\n          description.SpecimenPreparationSequence ?? []\n        specimenPreparationSteps.forEach(\n          (step: dmv.metadata.SpecimenPreparation, index: number): void => {\n            step.SpecimenPreparationStepContentItemSequence.forEach((\n              item: (\n                dcmjs.sr.valueTypes.CodeContentItem |\n                dcmjs.sr.valueTypes.TextContentItem |\n                dcmjs.sr.valueTypes.UIDRefContentItem |\n                dcmjs.sr.valueTypes.PNameContentItem |\n                dcmjs.sr.valueTypes.DateTimeContentItem\n              ),\n              index: number\n            ) => {\n              const name = new dcmjs.sr.coding.CodedConcept({\n                value: item.ConceptNameCodeSequence[0].CodeValue,\n                schemeDesignator:\n                    item.ConceptNameCodeSequence[0].CodingSchemeDesignator,\n                meaning: item.ConceptNameCodeSequence[0].CodeMeaning\n              })\n              if (item.ValueType === dcmjs.sr.valueTypes.ValueTypes.CODE) {\n                item = item as dcmjs.sr.valueTypes.CodeContentItem\n                const value = new dcmjs.sr.coding.CodedConcept({\n                  value: item.ConceptCodeSequence[0].CodeValue,\n                  schemeDesignator:\n                      item.ConceptCodeSequence[0].CodingSchemeDesignator,\n                  meaning: item.ConceptCodeSequence[0].CodeMeaning\n                })\n                if (!name.equals(SpecimenPreparationStepItems.PROCESSING_TYPE)) {\n                  if (name.equals(SpecimenPreparationStepItems.STAIN)) {\n                    attributes.push({\n                      name: 'Tissue stain',\n                      value: value.CodeMeaning\n                    })\n                  }\n                }\n              } else if (item.ValueType === dcmjs.sr.valueTypes.ValueTypes.TEXT) {\n                item = item as dcmjs.sr.valueTypes.TextContentItem\n                if (!name.equals(SpecimenPreparationStepItems.PROCESSING_TYPE)) {\n                  if (name.equals(SpecimenPreparationStepItems.STAIN)) {\n                    attributes.push({\n                      name: 'Tissue stain',\n                      value: item.TextValue\n                    })\n                  }\n                }\n              }\n            })\n          }\n        )\n      })\n    } catch (error: any) {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.DCMJS,\n        new CustomError(\n          errorTypes.ENCODINGANDDECODING,\n          error.message\n        )\n      )\n    }\n\n    const maxValue = Math.pow(2, this.props.metadata[0].BitsAllocated) - 1\n\n    const title = (\n      description != null ? `${identifier}: ${description}` : identifier\n    )\n    let settings\n    let item\n    if (this.props.opticalPath.isMonochromatic) {\n      // monochrome images that can be pseudo-colored\n      let colorSettings\n      if (this.state.currentStyle.color != null) {\n        colorSettings = (\n          <>\n            <Divider plain>\n              Color\n            </Divider>\n            <Row justify='center' align='middle' gutter={[8, 8]}>\n              <Col span={5}>\n                Red\n              </Col>\n              <Col span={14}>\n                <Slider\n                  range={false}\n                  min={0}\n                  max={255}\n                  step={1}\n                  value={this.state.currentStyle.color[0]}\n                  onChange={this.handleColorRChange}\n                />\n              </Col>\n              <Col span={5}>\n                <InputNumber\n                  min={0}\n                  max={255}\n                  size='small'\n                  style={{ width: '65px' }}\n                  value={this.state.currentStyle.color[0]}\n                  onChange={this.handleColorRChange}\n                />\n              </Col>\n            </Row>\n\n            <Row justify='center' align='middle' gutter={[8, 8]}>\n              <Col span={5}>\n                Green\n              </Col>\n              <Col span={14}>\n                <Slider\n                  range={false}\n                  min={0}\n                  max={255}\n                  step={1}\n                  value={this.state.currentStyle.color[1]}\n                  onChange={this.handleColorGChange}\n                />\n              </Col>\n              <Col span={5}>\n                <InputNumber\n                  min={0}\n                  max={255}\n                  size='small'\n                  style={{ width: '65px' }}\n                  value={this.state.currentStyle.color[1]}\n                  onChange={this.handleColorGChange}\n                />\n              </Col>\n            </Row>\n\n            <Row justify='center' align='middle' gutter={[8, 8]}>\n              <Col span={5}>\n                Blue\n              </Col>\n              <Col span={14}>\n                <Slider\n                  range={false}\n                  min={0}\n                  max={255}\n                  step={1}\n                  value={this.state.currentStyle.color[2]}\n                  onChange={this.handleColorBChange}\n                />\n              </Col>\n              <Col span={5}>\n                <InputNumber\n                  min={0}\n                  max={255}\n                  size='small'\n                  style={{ width: '65px' }}\n                  value={this.state.currentStyle.color[2]}\n                  onChange={this.handleColorBChange}\n                />\n              </Col>\n            </Row>\n          </>\n        )\n      } else {\n        colorSettings = (\n          <>\n            <Divider plain>\n              Color\n            </Divider>\n            Custom pseudo-coloring is disabled because pixels are colorized via\n            a provided palette color lookup table.\n          </>\n        )\n      }\n\n      let windowSettings\n      if (this.state.currentStyle.limitValues != null) {\n        windowSettings = (\n          <>\n            <Divider plain>\n              Values of interest\n            </Divider>\n            <Row justify='center' align='middle' gutter={[8, 8]}>\n              <Col span={6}>\n                <InputNumber\n                  min={0}\n                  max={this.state.currentStyle.limitValues[1]}\n                  size='small'\n                  style={{ width: '75px' }}\n                  value={this.state.currentStyle.limitValues[0]}\n                  onChange={this.handleLowerLimitChange}\n                />\n              </Col>\n              <Col span={12}>\n                <Slider\n                  range\n                  min={0}\n                  max={maxValue}\n                  step={1}\n                  value={[\n                    this.state.currentStyle.limitValues[0],\n                    this.state.currentStyle.limitValues[1]\n                  ]}\n                  onChange={this.handleLimitChange}\n                />\n              </Col>\n              <Col span={6}>\n                <InputNumber\n                  min={this.state.currentStyle.limitValues[0]}\n                  max={maxValue}\n                  size='small'\n                  style={{ width: '75px' }}\n                  value={this.state.currentStyle.limitValues[1]}\n                  onChange={this.handleUpperLimitChange}\n                />\n              </Col>\n            </Row>\n          </>\n        )\n      }\n      settings = (\n        <div>\n          {windowSettings}\n          {colorSettings}\n          <Divider plain />\n          <Row justify='center' align='middle' gutter={[8, 8]}>\n            <Col span={6}>\n              Opacity\n            </Col>\n            <Col span={12}>\n              <Slider\n                range={false}\n                min={0}\n                max={1}\n                step={0.01}\n                value={this.state.currentStyle.opacity}\n                onChange={this.handleOpacityChange}\n              />\n            </Col>\n            <Col span={6}>\n              <InputNumber\n                min={0}\n                max={1}\n                size='small'\n                step={0.1}\n                style={{ width: '65px' }}\n                value={this.state.currentStyle.opacity}\n                onChange={this.handleOpacityChange}\n              />\n            </Col>\n          </Row>\n        </div>\n      )\n      const colors = this.getCurrentColors()\n      item = (\n        <Badge\n          offset={[-20, 20]}\n          count={' '}\n          style={{\n            borderStyle: 'solid',\n            borderWidth: '1px',\n            borderColor: 'gray',\n            visibility: this.state.isVisible ? 'visible' : 'hidden',\n            backgroundImage: `linear-gradient(to right, ${colors.toString()})`\n          }}\n        >\n          <Description\n            header={title}\n            attributes={attributes}\n            selectable\n            hasLongValues\n          />\n        </Badge>\n      )\n    } else {\n      // color images\n      settings = (\n        <div>\n          <Row justify='center' align='middle' gutter={[8, 8]}>\n            <Col span={6}>\n              Opacity\n            </Col>\n            <Col span={12}>\n              <Slider\n                range={false}\n                min={0}\n                max={1}\n                step={0.01}\n                value={this.state.currentStyle.opacity}\n                onChange={this.handleOpacityChange}\n              />\n            </Col>\n            <Col span={6}>\n              <InputNumber\n                min={0}\n                max={1}\n                size='small'\n                step={0.1}\n                style={{ width: '60px' }}\n                value={this.state.currentStyle.opacity}\n                onChange={this.handleOpacityChange}\n              />\n            </Col>\n          </Row>\n        </div>\n      )\n      item = (\n        <Description\n          header={title}\n          attributes={attributes}\n          selectable\n          hasLongValues\n        />\n      )\n    }\n\n    const buttons = []\n    if (this.props.isRemovable) {\n      buttons.push(\n        <Tooltip title='Remove Optical Path'>\n          <Button\n            type='default'\n            shape='circle'\n            icon={<DeleteOutlined />}\n            onClick={this.handleRemoval}\n          />\n        </Tooltip>\n      )\n    }\n\n    const {\n      defaultStyle,\n      isRemovable,\n      isVisible,\n      metadata,\n      onVisibilityChange,\n      onStyleChange,\n      onRemoval,\n      opticalPath,\n      ...otherProps\n    } = this.props\n    return (\n      <Menu.Item\n        style={{ height: '100%', paddingLeft: '3px' }}\n        key={this.props.opticalPath.identifier}\n        {...otherProps}\n      >\n        <Space align='start'>\n          <div style={{ paddingLeft: '14px' }}>\n            <Space direction='vertical' align='end'>\n              <Switch\n                size='small'\n                checked={this.state.isVisible}\n                onChange={this.handleVisibilityChange}\n                checkedChildren={<EyeOutlined />}\n                unCheckedChildren={<EyeInvisibleOutlined />}\n              />\n              <Popover\n                placement='left'\n                content={settings}\n                overlayStyle={{ width: '350px' }}\n                title='Display Settings'\n              >\n                <Button\n                  type='primary'\n                  shape='circle'\n                  icon={<SettingOutlined />}\n                />\n              </Popover>\n              {buttons}\n            </Space>\n          </div>\n          {item}\n        </Space>\n      </Menu.Item>\n    )\n  }\n}\n\nexport default OpticalPathItem\n","import React from 'react'\nimport * as dmv from 'dicom-microscopy-viewer'\nimport { Button as Btn, Menu, Select, Space, Tooltip } from 'antd'\nimport { AppstoreAddOutlined } from '@ant-design/icons'\n\nimport OpticalPathItem from './OpticalPathItem'\n\nconst { Option } = Select\n\ninterface OpticalPathListProps {\n  opticalPaths: dmv.opticalPath.OpticalPath[]\n  metadata: {\n    [opticalPathIdentifier: string]: dmv.metadata.VLWholeSlideMicroscopyImage[]\n  }\n  visibleOpticalPathIdentifiers: Set<string>\n  activeOpticalPathIdentifiers: Set<string>\n  defaultOpticalPathStyles: {\n    [opticalPathIdentifier: string]: {\n      opacity: number\n      color?: number[]\n      limitValues?: number[]\n      paletteColorLookupTable?: dmv.color.PaletteColorLookupTable\n    }\n  }\n  onOpticalPathVisibilityChange: ({ opticalPathIdentifier, isVisible }: {\n    opticalPathIdentifier: string\n    isVisible: boolean\n  }) => void\n  onOpticalPathStyleChange: ({ opticalPathIdentifier, styleOptions }: {\n    opticalPathIdentifier: string\n    styleOptions: {\n      opacity?: number\n      color?: number[]\n      limitValues?: number[]\n    }\n  }) => void\n  onOpticalPathActivityChange: ({ opticalPathIdentifier, isActive }: {\n    opticalPathIdentifier: string\n    isActive: boolean\n  }) => void\n  selectedPresentationStateUID?: string\n}\n\ninterface OpticalPathListState {\n  selectedOpticalPathIdentifier?: string\n}\n\n/**\n * React component representing a list of optical paths.\n */\nclass OpticalPathList extends React.Component<OpticalPathListProps, OpticalPathListState> {\n  state = {\n    selectedOpticalPathIdentifier: undefined\n  }\n\n  constructor (props: OpticalPathListProps) {\n    super(props)\n    this.handleItemAddition = this.handleItemAddition.bind(this)\n    this.handleItemRemoval = this.handleItemRemoval.bind(this)\n    this.handleItemSelectionChange = this.handleItemSelectionChange.bind(this)\n  }\n\n  /**\n   * Handler that gets called when an optical path should be removed.\n   */\n  handleItemRemoval (opticalPathIdentifier: string): void {\n    this.props.onOpticalPathActivityChange({\n      opticalPathIdentifier,\n      isActive: false\n    })\n  }\n\n  /**\n   * Handler that gets called when the selection of an optical path should change.\n   */\n  handleItemSelectionChange (\n    value: string\n  ): void {\n    this.setState({ selectedOpticalPathIdentifier: value })\n  }\n\n  /**\n   * Handler that gets called when an optical path should be added.\n   */\n  handleItemAddition (): void {\n    const identifier = this.state.selectedOpticalPathIdentifier\n    if (identifier !== undefined) {\n      this.props.onOpticalPathActivityChange({\n        opticalPathIdentifier: identifier,\n        isActive: true\n      })\n      this.setState({ selectedOpticalPathIdentifier: undefined })\n    }\n  }\n\n  render (): React.ReactNode {\n    if (this.props.metadata === undefined) {\n      return null\n    }\n\n    const isSelectable = this.props.opticalPaths.length > 1\n    const opticalPathItems: React.ReactNode[] = []\n    const optionItems: React.ReactNode[] = []\n    this.props.opticalPaths.forEach(opticalPath => {\n      const opticalPathIdentifier = opticalPath.identifier\n      const images = this.props.metadata[opticalPathIdentifier]\n      const seriesInstanceUID = images[0].SeriesInstanceUID\n      images[0].OpticalPathSequence.forEach(opticalPathItem => {\n        const id = opticalPathItem.OpticalPathIdentifier\n        const description = opticalPathItem.OpticalPathDescription\n        if (opticalPath.identifier === id) {\n          if (this.props.activeOpticalPathIdentifiers.has(id)) {\n            opticalPathItems.push(\n              <OpticalPathItem\n                key={`${seriesInstanceUID}-${id}`}\n                opticalPath={opticalPath}\n                metadata={images}\n                isVisible={this.props.visibleOpticalPathIdentifiers.has(id)}\n                defaultStyle={this.props.defaultOpticalPathStyles[id]}\n                onVisibilityChange={this.props.onOpticalPathVisibilityChange}\n                onStyleChange={this.props.onOpticalPathStyleChange}\n                onRemoval={this.handleItemRemoval}\n                isRemovable={isSelectable}\n              />\n            )\n          } else {\n            let title\n            if (description !== '') {\n              title = `${id} - ${description}`\n            } else {\n              title = `${id}`\n            }\n            optionItems.push(\n              <Option key={id} value={id}>{title}</Option>\n            )\n          }\n        }\n      })\n    })\n\n    let opticalPathSelector\n    if (isSelectable) {\n      opticalPathSelector = (\n        <Space align='center' size={20} style={{ padding: '14px' }}>\n          <Select\n            defaultValue=''\n            style={{ width: 200 }}\n            onChange={this.handleItemSelectionChange}\n            value={this.state.selectedOpticalPathIdentifier}\n            allowClear\n          >\n            {optionItems}\n          </Select>\n          <Tooltip title='Add'>\n            <Btn\n              icon={<AppstoreAddOutlined />}\n              type='primary'\n              onClick={this.handleItemAddition}\n            />\n          </Tooltip>\n        </Space>\n      )\n    }\n\n    return (\n      <Menu selectable={false}>\n        {opticalPathItems}\n        {opticalPathSelector}\n      </Menu>\n    )\n  }\n}\n\nexport default OpticalPathList\n","import React from 'react'\nimport * as dmv from 'dicom-microscopy-viewer'\nimport {\n  Button,\n  Col,\n  InputNumber,\n  Menu,\n  Popover,\n  Row,\n  Slider,\n  Space,\n  Switch\n} from 'antd'\nimport { SettingOutlined } from '@ant-design/icons'\nimport { FaEye, FaEyeSlash } from 'react-icons/fa'\n\nimport Description from './Description'\n\ninterface MappingItemProps {\n  mapping: dmv.mapping.ParameterMapping\n  metadata: dmv.metadata.ParametricMap[]\n  isVisible: boolean\n  defaultStyle: {\n    opacity: number\n  }\n  onVisibilityChange: ({ mappingUID, isVisible }: {\n    mappingUID: string\n    isVisible: boolean\n  }) => void\n  onStyleChange: ({ mappingUID, styleOptions }: {\n    mappingUID: string\n    styleOptions: {\n      opacity?: number\n    }\n  }) => void\n}\n\ninterface MappingItemState {\n  isVisible: boolean\n  currentStyle: {\n    opacity: number\n  }\n}\n\n/**\n * React component representing a Real World Value Mapping.\n */\nclass MappingItem extends React.Component<MappingItemProps, MappingItemState> {\n  constructor (props: MappingItemProps) {\n    super(props)\n    this.handleVisibilityChange = this.handleVisibilityChange.bind(this)\n    this.handleOpacityChange = this.handleOpacityChange.bind(this)\n    this.state = {\n      isVisible: this.props.isVisible,\n      currentStyle: {\n        opacity: this.props.defaultStyle.opacity\n      }\n    }\n  }\n\n  handleVisibilityChange (\n    checked: boolean,\n    event: React.MouseEvent<HTMLButtonElement>\n  ): void {\n    this.props.onVisibilityChange({\n      mappingUID: this.props.mapping.uid,\n      isVisible: checked\n    })\n    this.setState({ isVisible: checked })\n  }\n\n  handleOpacityChange (value: number | null): void {\n    if (value != null) {\n      this.props.onStyleChange({\n        mappingUID: this.props.mapping.uid,\n        styleOptions: {\n          opacity: value\n        }\n      })\n      this.setState(state => ({\n        currentStyle: {\n          opacity: value\n        }\n      }))\n    }\n  }\n\n  render (): React.ReactNode {\n    const attributes: Array<{ name: string, value: string }> = [\n      {\n        name: 'Description',\n        value: this.props.mapping.description\n      }\n    ]\n\n    const settings = (\n      <div>\n        <Row justify='center' align='middle'>\n          <Col span={6}>\n            Opacity\n          </Col>\n          <Col span={12}>\n            <Slider\n              range={false}\n              min={0}\n              max={1}\n              step={0.01}\n              value={this.state.currentStyle.opacity}\n              onChange={this.handleOpacityChange}\n            />\n          </Col>\n          <Col span={6}>\n            <InputNumber\n              min={0}\n              max={1}\n              size='small'\n              step={0.1}\n              style={{ width: '65px' }}\n              value={this.state.currentStyle.opacity}\n              onChange={this.handleOpacityChange}\n            />\n          </Col>\n        </Row>\n      </div>\n    )\n\n    /**\n     * This hack is required for Menu.Item to work properly:\n     * https://github.com/react-component/menu/issues/142\n     */\n    const {\n      defaultStyle,\n      isVisible,\n      mapping,\n      metadata,\n      onVisibilityChange,\n      onStyleChange,\n      ...otherProps\n    } = this.props\n    return (\n      <Menu.Item\n        style={{ height: '100%', paddingLeft: '3px' }}\n        key={this.props.mapping.uid}\n        {...otherProps}\n      >\n        <Space align='start'>\n          <div style={{ paddingLeft: '14px' }}>\n            <Space direction='vertical' align='end' size={100}>\n              <Space direction='vertical' align='end'>\n                <Switch\n                  size='small'\n                  onChange={this.handleVisibilityChange}\n                  checked={this.props.isVisible}\n                  checkedChildren={<FaEye />}\n                  unCheckedChildren={<FaEyeSlash />}\n                />\n                <Popover\n                  placement='left'\n                  content={settings}\n                  overlayStyle={{ width: '350px' }}\n                  title='Display Settings'\n                >\n                  <Button\n                    type='primary'\n                    shape='circle'\n                    icon={<SettingOutlined />}\n                  />\n                </Popover>\n              </Space>\n            </Space>\n          </div>\n          <Description\n            header={this.props.mapping.label}\n            attributes={attributes}\n            selectable\n            hasLongValues\n          />\n        </Space>\n      </Menu.Item>\n    )\n  }\n}\n\nexport default MappingItem\n","import React from 'react'\nimport * as dmv from 'dicom-microscopy-viewer'\nimport { Menu } from 'antd'\n\nimport MappingItem from './MappingItem'\n\ninterface MappingListProps {\n  mappings: dmv.mapping.ParameterMapping[]\n  metadata: {\n    [mappingUID: string]: dmv.metadata.ParametricMap[]\n  }\n  visibleMappingUIDs: Set<string>\n  defaultMappingStyles: {\n    [mappingUID: string]: { opacity: number }\n  }\n  onMappingVisibilityChange: ({ mappingUID, isVisible }: {\n    mappingUID: string\n    isVisible: boolean\n  }) => void\n  onMappingStyleChange: ({ mappingUID, styleOptions }: {\n    mappingUID: string\n    styleOptions: {\n      opacity?: number\n    }\n  }) => void\n}\n\n/**\n * React component representing a list of Real World Value Mappings.\n */\nclass MappingList extends React.Component<MappingListProps, {}> {\n  render (): React.ReactNode {\n    const items = this.props.mappings.map((mapping, index) => {\n      const uid = mapping.uid\n      return (\n        <MappingItem\n          key={mapping.uid}\n          mapping={mapping}\n          metadata={this.props.metadata[uid]}\n          isVisible={this.props.visibleMappingUIDs.has(uid)}\n          defaultStyle={this.props.defaultMappingStyles[uid]}\n          onVisibilityChange={this.props.onMappingVisibilityChange}\n          onStyleChange={this.props.onMappingStyleChange}\n        />\n      )\n    })\n\n    return (\n      <Menu selectable={false}>\n        {items}\n      </Menu>\n    )\n  }\n}\n\nexport default MappingList\n","import React from 'react'\nimport * as dmv from 'dicom-microscopy-viewer'\nimport {\n  Button,\n  Col,\n  InputNumber,\n  Menu,\n  Popover,\n  Row,\n  Slider,\n  Space,\n  Switch\n} from 'antd'\nimport { SettingOutlined } from '@ant-design/icons'\nimport { FaEye, FaEyeSlash } from 'react-icons/fa'\n\nimport Description from './Description'\n\ninterface SegmentItemProps {\n  segment: dmv.segment.Segment\n  isVisible: boolean\n  metadata: dmv.metadata.Segmentation[]\n  defaultStyle: {\n    opacity: number\n  }\n  onVisibilityChange: ({ segmentUID, isVisible }: {\n    segmentUID: string\n    isVisible: boolean\n  }) => void\n  onStyleChange: ({ segmentUID, styleOptions }: {\n    segmentUID: string\n    styleOptions: {\n      opacity: number\n    }\n  }) => void\n}\n\ninterface SegmentItemState {\n  isVisible: boolean\n  currentStyle: {\n    opacity: number\n  }\n}\n\n/**\n * React component representing a Segment.\n */\nclass SegmentItem extends React.Component<SegmentItemProps, SegmentItemState> {\n  constructor (props: SegmentItemProps) {\n    super(props)\n    this.handleVisibilityChange = this.handleVisibilityChange.bind(this)\n    this.handleOpacityChange = this.handleOpacityChange.bind(this)\n    this.state = {\n      isVisible: this.props.isVisible,\n      currentStyle: { opacity: this.props.defaultStyle.opacity }\n    }\n  }\n\n  handleVisibilityChange (\n    checked: boolean,\n    event: React.MouseEvent<HTMLButtonElement>\n  ): void {\n    this.props.onVisibilityChange({\n      segmentUID: this.props.segment.uid,\n      isVisible: checked\n    })\n    this.setState({ isVisible: checked })\n  }\n\n  handleOpacityChange (value: number | null): void {\n    if (value != null) {\n      this.props.onStyleChange({\n        segmentUID: this.props.segment.uid,\n        styleOptions: {\n          opacity: value\n        }\n      })\n      this.setState({ currentStyle: { opacity: value } })\n    }\n  }\n\n  render (): React.ReactNode {\n    const attributes: Array<{ name: string, value: string }> = [\n      {\n        name: 'Property Type',\n        value: this.props.segment.propertyType.CodeMeaning\n      },\n      {\n        name: 'Property Category',\n        value: this.props.segment.propertyCategory.CodeMeaning\n      },\n      {\n        name: 'Algorithm Name',\n        value: this.props.segment.algorithmName\n      }\n    ]\n\n    const settings = (\n      <div>\n        <Row justify='center' align='middle'>\n          <Col span={6}>\n            Opacity\n          </Col>\n          <Col span={12}>\n            <Slider\n              range={false}\n              min={0}\n              max={1}\n              step={0.01}\n              value={this.state.currentStyle.opacity}\n              onChange={this.handleOpacityChange}\n            />\n          </Col>\n          <Col span={6}>\n            <InputNumber\n              min={0}\n              max={1}\n              size='small'\n              step={0.1}\n              style={{ width: '65px' }}\n              value={this.state.currentStyle.opacity}\n              onChange={this.handleOpacityChange}\n            />\n          </Col>\n        </Row>\n      </div>\n    )\n\n    /**\n     * This hack is required for Menu.Item to work properly:\n     * https://github.com/react-component/menu/issues/142\n     */\n    const {\n      defaultStyle,\n      isVisible,\n      segment,\n      metadata,\n      onVisibilityChange,\n      onStyleChange,\n      ...otherProps\n    } = this.props\n    return (\n      <Menu.Item\n        style={{ height: '100%', paddingLeft: '3px' }}\n        key={this.props.segment.uid}\n        {...otherProps}\n      >\n        <Space align='start'>\n          <div style={{ paddingLeft: '14px' }}>\n            <Space direction='vertical' align='end'>\n              <Switch\n                size='small'\n                onChange={this.handleVisibilityChange}\n                checked={this.props.isVisible}\n                checkedChildren={<FaEye />}\n                unCheckedChildren={<FaEyeSlash />}\n              />\n              <Popover\n                placement='left'\n                content={settings}\n                overlayStyle={{ width: '350px' }}\n                title='Display Settings'\n              >\n                <Button\n                  type='primary'\n                  shape='circle'\n                  icon={<SettingOutlined />}\n                />\n              </Popover>\n            </Space>\n          </div>\n          <Description\n            header={this.props.segment.label}\n            attributes={attributes}\n            selectable\n            hasLongValues\n          />\n        </Space>\n      </Menu.Item>\n    )\n  }\n}\n\nexport default SegmentItem\n","import React from 'react'\nimport * as dmv from 'dicom-microscopy-viewer'\nimport { Menu } from 'antd'\n\nimport SegmentItem from './SegmentItem'\n\ninterface SegmentListProps {\n  segments: dmv.segment.Segment[]\n  visibleSegmentUIDs: Set<string>\n  metadata: {\n    [segmentUID: string]: dmv.metadata.Segmentation[]\n  }\n  defaultSegmentStyles: {\n    [segmentUID: string]: {\n      opacity: number\n    }\n  }\n  onSegmentVisibilityChange: ({ segmentUID, isVisible }: {\n    segmentUID: string\n    isVisible: boolean\n  }) => void\n  onSegmentStyleChange: ({ segmentUID, styleOptions }: {\n    segmentUID: string\n    styleOptions: {\n      opacity: number\n    }\n  }) => void\n}\n\n/**\n * React component representing a list of Segments.\n */\nclass SegmentList extends React.Component<SegmentListProps, {}> {\n  render (): React.ReactNode {\n    const items = this.props.segments.map((segment, index) => {\n      const uid = segment.uid\n      return (\n        <SegmentItem\n          key={segment.uid}\n          segment={segment}\n          metadata={this.props.metadata[uid]}\n          isVisible={this.props.visibleSegmentUIDs.has(uid)}\n          defaultStyle={this.props.defaultSegmentStyles[uid]}\n          onVisibilityChange={this.props.onSegmentVisibilityChange}\n          onStyleChange={this.props.onSegmentStyleChange}\n        />\n      )\n    })\n\n    return (\n      <Menu selectable={false}>\n        {items}\n      </Menu>\n    )\n  }\n}\n\nexport default SegmentList\n","import React from 'react'\nimport {\n  NavigateFunction,\n  Params,\n  useLocation,\n  useNavigate,\n  useParams,\n  Location\n} from 'react-router-dom'\n\nexport interface RouteComponentProps {\n  location: Location\n  navigate: NavigateFunction\n  params: Params<string>\n}\n\nexport function withRouter<T> (Component: React.ComponentType<T>): Function {\n  function ComponentWithRouterProp (props: any): JSX.Element {\n    const location = useLocation()\n    const navigate = useNavigate()\n    const params = useParams()\n    return (\n      <Component\n        {...props}\n        location={location}\n        navigate={navigate}\n        params={params}\n      />\n    )\n  }\n  return ComponentWithRouterProp\n}\n","import React from 'react'\nimport { Col, Divider, InputNumber, Row, Slider } from 'antd'\n\ninterface ColorSettingsMenuProps {\n  annotationGroupsUIDs: string[]\n  defaultStyle: {\n    opacity: number\n    color: number[]\n  }\n  onStyleChange: Function\n}\n\ninterface ColorSettingsMenuState {\n  currentStyle: {\n    opacity: number\n    color?: number[]\n  }\n}\n\n/**\n * React component representing an Annotation Group.\n */\nclass ColorSettingsMenu extends React.Component<\nColorSettingsMenuProps,\nColorSettingsMenuState\n> {\n  constructor (props: ColorSettingsMenuProps) {\n    super(props)\n    this.handleOpacityChange = this.handleOpacityChange.bind(this)\n    this.handleColorRChange = this.handleColorRChange.bind(this)\n    this.handleColorGChange = this.handleColorGChange.bind(this)\n    this.handleColorBChange = this.handleColorBChange.bind(this)\n    this.getCurrentColor = this.getCurrentColor.bind(this)\n    this.state = {\n      currentStyle: {\n        opacity: this.props.defaultStyle.opacity,\n        color: this.props.defaultStyle.color\n      }\n    }\n  }\n\n  handleOpacityChange (value: number | null): void {\n    if (value != null) {\n      this.props.annotationGroupsUIDs.forEach((uid) => {\n        this.props.onStyleChange({\n          uid,\n          styleOptions: {\n            color: this.state.currentStyle.color,\n            opacity: value\n          }\n        })\n      })\n      this.setState({\n        currentStyle: {\n          opacity: value,\n          color: this.state.currentStyle.color\n        }\n      })\n    }\n  }\n\n  handleColorRChange (value: number | number[] | null): void {\n    if (value != null && this.state.currentStyle.color !== undefined) {\n      const color = [\n        Array.isArray(value) ? value[0] : value,\n        this.state.currentStyle.color[1],\n        this.state.currentStyle.color[2]\n      ]\n      this.setState((state) => ({\n        currentStyle: {\n          color: color,\n          opacity: state.currentStyle.opacity\n        }\n      }))\n      this.props.annotationGroupsUIDs.forEach((uid) => {\n        this.props.onStyleChange({\n          uid,\n          styleOptions: {\n            color: color,\n            opacity: this.state.currentStyle.opacity\n          }\n        })\n      })\n    }\n  }\n\n  handleColorGChange (value: number | number[] | null): void {\n    if (value != null && this.state.currentStyle.color !== undefined) {\n      const color = [\n        this.state.currentStyle.color[0],\n        Array.isArray(value) ? value[0] : value,\n        this.state.currentStyle.color[2]\n      ]\n      this.setState((state) => ({\n        currentStyle: {\n          color: color,\n          opacity: state.currentStyle.opacity\n        }\n      }))\n      this.props.annotationGroupsUIDs.forEach((uid) => {\n        this.props.onStyleChange({\n          uid,\n          styleOptions: {\n            color: color,\n            opacity: this.state.currentStyle.opacity\n          }\n        })\n      })\n    }\n  }\n\n  handleColorBChange (value: number | number[] | null): void {\n    if (value != null && this.state.currentStyle.color !== undefined) {\n      const color = [\n        this.state.currentStyle.color[0],\n        this.state.currentStyle.color[1],\n        Array.isArray(value) ? value[0] : value\n      ]\n      this.setState((state) => ({\n        currentStyle: {\n          color: color,\n          opacity: state.currentStyle.opacity\n        }\n      }))\n\n      this.props.annotationGroupsUIDs.forEach((uid) => {\n        this.props.onStyleChange({\n          uid,\n          styleOptions: {\n            color: color,\n            opacity: this.state.currentStyle.opacity\n          }\n        })\n      })\n    }\n  }\n\n  getCurrentColor (): string {\n    const rgb2hex = (values: number[]): string => {\n      const r = values[0]\n      const g = values[1]\n      const b = values[2]\n      return '#' + (0x1000000 + (r << 16) + (g << 8) + b).toString(16).slice(1)\n    }\n\n    if (this.state.currentStyle.color != null) {\n      return rgb2hex(this.state.currentStyle.color)\n    } else {\n      return 'white'\n    }\n  }\n\n  render (): React.ReactNode {\n    let colorSettings\n    if (this.state.currentStyle.color != null) {\n      colorSettings = (\n        <>\n          <Divider plain>Color</Divider>\n          <Row justify='center' align='middle' gutter={[8, 8]}>\n            <Col span={5}>Red</Col>\n            <Col span={14}>\n              <Slider\n                range={false}\n                min={0}\n                max={255}\n                step={1}\n                value={this.state.currentStyle.color[0]}\n                onChange={this.handleColorRChange}\n              />\n            </Col>\n            <Col span={5}>\n              <InputNumber\n                min={0}\n                max={255}\n                size='small'\n                style={{ width: '65px' }}\n                value={this.state.currentStyle.color[0]}\n                onChange={this.handleColorRChange}\n              />\n            </Col>\n          </Row>\n\n          <Row justify='center' align='middle' gutter={[8, 8]}>\n            <Col span={5}>Green</Col>\n            <Col span={14}>\n              <Slider\n                range={false}\n                min={0}\n                max={255}\n                step={1}\n                value={this.state.currentStyle.color[1]}\n                onChange={this.handleColorGChange}\n              />\n            </Col>\n            <Col span={5}>\n              <InputNumber\n                min={0}\n                max={255}\n                size='small'\n                style={{ width: '65px' }}\n                value={this.state.currentStyle.color[1]}\n                onChange={this.handleColorGChange}\n              />\n            </Col>\n          </Row>\n\n          <Row justify='center' align='middle' gutter={[8, 8]}>\n            <Col span={5}>Blue</Col>\n            <Col span={14}>\n              <Slider\n                range={false}\n                min={0}\n                max={255}\n                step={1}\n                value={this.state.currentStyle.color[2]}\n                onChange={this.handleColorBChange}\n              />\n            </Col>\n            <Col span={5}>\n              <InputNumber\n                min={0}\n                max={255}\n                size='small'\n                style={{ width: '65px' }}\n                value={this.state.currentStyle.color[2]}\n                onChange={this.handleColorBChange}\n              />\n            </Col>\n          </Row>\n          <Divider plain />\n        </>\n      )\n    }\n\n    return (\n      <div>\n        {colorSettings}\n        <Row justify='start' align='middle' gutter={[8, 8]}>\n          <Col span={6}>Opacity</Col>\n          <Col span={12}>\n            <Slider\n              range={false}\n              min={0}\n              max={1}\n              step={0.01}\n              value={this.state.currentStyle.opacity}\n              onChange={this.handleOpacityChange}\n            />\n          </Col>\n          <Col span={6}>\n            <InputNumber\n              min={0}\n              max={1}\n              size='small'\n              step={0.1}\n              style={{ width: '65px' }}\n              value={this.state.currentStyle.opacity}\n              onChange={this.handleOpacityChange}\n            />\n          </Col>\n        </Row>\n      </div>\n    )\n  }\n}\n\nexport default ColorSettingsMenu\n","import React from 'react'\nimport { Menu, Space, Checkbox, Tooltip, Popover, Button } from 'antd'\nimport { SettingOutlined } from '@ant-design/icons'\nimport { Category, Type } from './AnnotationCategoryList'\nimport ColorSettingsMenu from './ColorSettingsMenu'\n\nconst AnnotationCategoryItem = ({\n  category,\n  onChange,\n  checkedAnnotationUids,\n  onStyleChange,\n  defaultAnnotationStyles\n}: {\n  category: Category\n  onChange: Function\n  onStyleChange: Function\n  defaultAnnotationStyles: {\n    [annotationUID: string]: {\n      opacity: number\n      color: number[]\n    }\n  }\n  checkedAnnotationUids: Set<string>\n}): JSX.Element => {\n  const { types } = category\n\n  const onCheckCategoryChange = (e: any): void => {\n    const isVisible = e.target.checked\n    types.forEach((type: Type) => {\n      handleChangeCheckedType({ type, isVisible })\n    })\n  }\n\n  const checkAll = types.every((type: Type) =>\n    type.uids.every((uid: string) => checkedAnnotationUids.has(uid))\n  )\n  const indeterminate =\n    !checkAll &&\n    types.some((type: Type) =>\n      type.uids.some((uid: string) => checkedAnnotationUids.has(uid))\n    )\n\n  const handleChangeCheckedType = ({\n    type,\n    isVisible\n  }: {\n    type: Type\n    isVisible: boolean\n  }): void => {\n    type.uids.forEach((uid: string) => {\n      onChange({ roiUID: uid, isVisible })\n    })\n  }\n\n  return (\n    <Menu.Item\n      style={{ height: '100%', paddingLeft: '3px' }}\n      key={category.CodeMeaning}\n    >\n      <Space align='start'>\n        <div style={{ paddingLeft: '14px', color: 'black' }}>\n          <Space direction='vertical' align='end'>\n            <Checkbox\n              indeterminate={indeterminate}\n              checked={checkAll}\n              onChange={onCheckCategoryChange}\n            >\n              <Tooltip\n                title={`${category.CodeValue}:${category.CodingSchemeDesignator}`}\n                mouseEnterDelay={1}\n              >\n                {category.CodeMeaning}\n              </Tooltip>\n              <Popover\n                placement='topLeft'\n                overlayStyle={{ width: '350px' }}\n                title='Display Settings'\n                content={() => (\n                  <ColorSettingsMenu\n                    annotationGroupsUIDs={types.reduce(\n                      (acc: string[], type) => {\n                        return [...acc, ...type.uids]\n                      },\n                      []\n                    )}\n                    onStyleChange={onStyleChange}\n                    defaultStyle={\n                      defaultAnnotationStyles[types[0].uids[0]]\n                    }\n                  />\n                )}\n              >\n                <Button\n                  type='primary'\n                  shape='circle'\n                  style={{ marginLeft: '10px' }}\n                  icon={<SettingOutlined />}\n                />\n              </Popover>\n            </Checkbox>\n          </Space>\n          {types.map((type: Type) => {\n            const { CodeMeaning, CodingSchemeDesignator, CodeValue, uids } =\n              type\n            const shortenedCodeMeaning = CodeMeaning.slice(0, 22)\n            const displayCodeMeaning = shortenedCodeMeaning === CodeMeaning ? CodeMeaning : `${shortenedCodeMeaning}...`\n            const isChecked = uids.every((uid: string) =>\n              checkedAnnotationUids.has(uid)\n            )\n            const indeterminateType =\n              !isChecked &&\n              uids.some((uid: string) => checkedAnnotationUids.has(uid))\n            return (\n              <div\n                key={`${type.CodingSchemeDesignator}:${type.CodeMeaning}`}\n                style={{\n                  paddingLeft: '25px',\n                  width: '100%',\n                  display: 'flex',\n                  flexDirection: 'row'\n                }}\n              >\n                <Checkbox\n                  indeterminate={indeterminateType}\n                  checked={isChecked}\n                  onChange={(e: any) =>\n                    handleChangeCheckedType({\n                      type,\n                      isVisible: e.target.checked\n                    })}\n                />\n                <div style={{ paddingLeft: '5px' }}>\n                  <Tooltip\n                    title={`${CodeValue}:${CodingSchemeDesignator}`}\n                    mouseEnterDelay={1}\n                  >\n                    {displayCodeMeaning}\n                  </Tooltip>\n                  <Popover\n                    placement='topLeft'\n                    overlayStyle={{ width: '350px' }}\n                    title='Display Settings'\n                    content={() => (\n                      <ColorSettingsMenu\n                        annotationGroupsUIDs={type.uids}\n                        onStyleChange={onStyleChange}\n                        defaultStyle={defaultAnnotationStyles[type.uids[0]]}\n                      />\n                    )}\n                  >\n                    <Button\n                      type='primary'\n                      shape='circle'\n                      style={{ marginLeft: '10px' }}\n                      icon={<SettingOutlined />}\n                    />\n                  </Popover>\n                </div>\n              </div>\n            )\n          })}\n        </div>\n      </Space>\n    </Menu.Item>\n  )\n}\n\nexport default AnnotationCategoryItem\n","import React from 'react'\nimport { Menu } from 'antd'\nimport AnnotationCategoryItem from './AnnotationCategoryItem'\n\nexport interface AnnotationCategoryAndType {\n  uid: string\n  type: Omit<Type, 'uids'>\n  category: Omit<Category, 'types'>\n}\nexport interface Type {\n  CodeValue: string\n  CodeMeaning: string\n  CodingSchemeDesignator: string\n  uids: string[]\n}\nexport interface Category {\n  CodeValue: string\n  CodeMeaning: string\n  CodingSchemeDesignator: string\n  types: Type[]\n}\n\nconst getCategories = (annotations: any): Record<string, Category> => {\n  const categories = annotations?.reduce(\n    (\n      categoriesAcc: Record<string, Category & { types: Record<string, Type> }>,\n      annotation: AnnotationCategoryAndType\n    ) => {\n      const { category, type, uid } = annotation\n      const categoryKey = category.CodeMeaning\n      const typeKey = type.CodeMeaning\n\n      const oldCategory = categoriesAcc[categoryKey] ?? {\n        ...category,\n        types: {}\n      }\n      const oldType = oldCategory.types[typeKey] ?? {\n        ...type,\n        uids: []\n      }\n\n      return {\n        ...categoriesAcc,\n        [categoryKey]: {\n          ...oldCategory,\n          types: {\n            ...oldCategory.types,\n            [typeKey]: { ...oldType, uids: [...oldType.uids, uid] }\n          }\n        }\n      }\n    },\n    {}\n  )\n\n  // Normalizing types so that it's an array instead of an object:\n  Object.keys(categories).forEach((categoryKey: string) => {\n    const category = categories[categoryKey]\n    const { types } = category\n    const typesArr = Object.keys(types).map(\n      (typeKey: string) => types[typeKey]\n    )\n    categories[categoryKey].types = typesArr\n  })\n\n  return categories\n}\n\nconst AnnotationCategoryList = ({\n  annotations,\n  onChange,\n  onStyleChange,\n  defaultAnnotationStyles,\n  checkedAnnotationUids\n}: {\n  annotations: AnnotationCategoryAndType[]\n  onChange: Function\n  onStyleChange: Function\n  defaultAnnotationStyles: {\n    [annotationUID: string]: {\n      opacity: number\n      color: number[]\n    }\n  }\n  checkedAnnotationUids: Set<string>\n}): JSX.Element => {\n  const categories: Record<string, Category> = getCategories(annotations)\n\n  if (Object.keys(categories).length === 0) {\n    return <></>\n  }\n\n  const items = Object.keys(categories).map((categoryKey: any) => {\n    const category = categories[categoryKey]\n    return (\n      <AnnotationCategoryItem\n        key={category.CodeMeaning}\n        category={category}\n        onChange={onChange}\n        onStyleChange={onStyleChange}\n        defaultAnnotationStyles={defaultAnnotationStyles}\n        checkedAnnotationUids={checkedAnnotationUids}\n      />\n    )\n  })\n\n  return <Menu selectable={false}>{items}</Menu>\n}\nexport default AnnotationCategoryList\n","const HoveredRoiTooltip = ({\n  xPosition,\n  yPosition,\n  attributes\n}: {\n  xPosition: number\n  yPosition: number\n  attributes: Array<{ name: string, value: string }>\n}): JSX.Element => {\n  return (\n    <div\n      style={{\n        position: 'fixed',\n        top: `${yPosition}px`,\n        left: `${xPosition}px`,\n        backgroundColor: 'rgba(230, 230, 230, 0.65)',\n        minWidth: '150px',\n        minHeight: '60px',\n        padding: '20px',\n        fontWeight: 'bold',\n        pointerEvents: 'none'\n      }}\n    >\n      {attributes.map((attr) => (\n        <div key={attr.name}>\n          {attr.name}: <span style={{ fontWeight: 500 }}>{attr.value}</span>\n        </div>\n      ))}\n    </div>\n  )\n}\n\nexport default HoveredRoiTooltip\n","import * as dmv from 'dicom-microscopy-viewer'\nimport * as dcmjs from 'dcmjs'\nimport { AnnotationCategoryAndType } from '../components/AnnotationCategoryList'\n\nexport const adaptRoiToAnnotation = (roi: dmv.roi.ROI): AnnotationCategoryAndType => {\n  const { uid, evaluations } = roi\n\n  const result = {\n    category: {\n      CodeValue: 'undefined',\n      CodeMeaning: 'undefined',\n      CodingSchemeDesignator: 'undefined'\n    },\n    type: {\n      CodeValue: 'undefined',\n      CodeMeaning: 'undefined',\n      CodingSchemeDesignator: 'undefined'\n    }\n  }\n\n  evaluations.forEach((\n    item: (\n      dcmjs.sr.valueTypes.TextContentItem |\n      dcmjs.sr.valueTypes.CodeContentItem\n    )\n  ) => {\n    const nameValue = item.ConceptNameCodeSequence[0].CodeValue\n    if (item.ValueType === dcmjs.sr.valueTypes.ValueTypes.CODE) {\n      const codeContentItem = item as dcmjs.sr.valueTypes.CodeContentItem\n      const value = codeContentItem.ConceptCodeSequence[0]\n      // For consistency with Segment and Annotation Group\n      if (nameValue === '276214006') {\n        result.category = { ...value }\n      } else if (nameValue === '121071') {\n        result.type = { ...value }\n      }\n    }\n  })\n\n  return {\n    ...result,\n    uid\n  }\n}\n","import React from 'react'\nimport {\n  FaCrosshairs,\n  FaDrawPolygon,\n  FaEye,\n  FaEyeSlash,\n  FaHandPaper,\n  FaHandPointer,\n  FaTrash,\n  FaSave\n} from 'react-icons/fa'\nimport {\n  Button as Btn,\n  Checkbox,\n  Descriptions,\n  Divider,\n  InputNumber,\n  message,\n  Menu,\n  Modal,\n  Layout,\n  Row,\n  Select,\n  Space,\n  Tooltip\n} from 'antd'\nimport { UndoOutlined, CheckOutlined, StopOutlined } from '@ant-design/icons'\nimport * as dmv from 'dicom-microscopy-viewer'\nimport * as dcmjs from 'dcmjs'\nimport * as dwc from 'dicomweb-client'\n\nimport DicomWebManager from '../DicomWebManager'\nimport AnnotationList from './AnnotationList'\nimport AnnotationGroupList from './AnnotationGroupList'\nimport Button from './Button'\nimport Equipment from './Equipment'\nimport Report, { MeasurementReport } from './Report'\nimport SpecimenList from './SpecimenList'\nimport OpticalPathList from './OpticalPathList'\nimport MappingList from './MappingList'\nimport SegmentList from './SegmentList'\nimport { AnnotationSettings } from '../AppConfig'\nimport { Slide } from '../data/slides'\nimport { StorageClasses } from '../data/uids'\nimport { findContentItemsByName } from '../utils/sr'\nimport { RouteComponentProps, withRouter } from '../utils/router'\nimport { CustomError, errorTypes } from '../utils/CustomError'\nimport NotificationMiddleware, {\n  NotificationMiddlewareContext\n} from '../services/NotificationMiddleware'\nimport AnnotationCategoryList from './AnnotationCategoryList'\nimport HoveredRoiTooltip from './HoveredRoiTooltip'\nimport { adaptRoiToAnnotation } from '../services/RoiToAnnotationAdapter'\n\nconst DEFAULT_ROI_STROKE_COLOR: number[] = [255, 234, 0] // [0, 126, 163]\nconst DEFAULT_ROI_FILL_COLOR: number[] = [255, 234, 0, 0.2] // [0, 126, 163, 0.2]\nconst DEFAULT_ROI_STROKE_WIDTH: number = 2\nconst DEFAULT_ROI_RADIUS: number = 5\n\nconst DEFAULT_ANNOTATION_OPACITY = 0.4\nconst DEFAULT_ANNOTATION_STROKE_COLOR = [0, 0, 0]\nconst DEFAULT_ANNOTATION_COLOR_PALETTE = [\n  [54, 162, 235],\n  [181, 65, 98],\n  [75, 192, 192],\n  [255, 158, 64],\n  [153, 102, 254],\n  [255, 205, 86],\n  [200, 203, 207]\n]\n\nconst _buildKey = (concept: {\n  CodeValue: string\n  CodeMeaning: string\n  CodingSchemeDesignator: string\n  CodingSchemeVersion?: string\n}): string => {\n  const codingScheme = concept.CodingSchemeDesignator\n  const codeValue = concept.CodeValue\n  return `${codingScheme}-${codeValue}`\n}\n\nconst _getRoiKey = (roi: dmv.roi.ROI): string | undefined => {\n  const matches = findContentItemsByName({\n    content: roi.evaluations,\n    name: new dcmjs.sr.coding.CodedConcept({\n      value: '121071',\n      meaning: 'Finding',\n      schemeDesignator: 'DCM'\n    })\n  })\n  if (matches.length === 0) {\n    console.warn(`no finding found for ROI ${roi.uid}`)\n    return\n  }\n  const finding = matches[0] as dcmjs.sr.valueTypes.CodeContentItem\n  const findingName = finding.ConceptCodeSequence[0]\n  return _buildKey(findingName)\n}\n\nconst _areROIsEqual = (a: dmv.roi.ROI, b: dmv.roi.ROI): boolean => {\n  if (a.scoord3d.graphicType !== b.scoord3d.graphicType) {\n    return false\n  }\n  if (a.scoord3d.frameOfReferenceUID !== b.scoord3d.frameOfReferenceUID) {\n    return false\n  }\n  if (a.scoord3d.graphicData.length !== b.scoord3d.graphicData.length) {\n    return false\n  }\n\n  const decimals = 6\n  for (let i = 0; i < a.scoord3d.graphicData.length; ++i) {\n    if (a.scoord3d.graphicType === 'POINT') {\n      const s1 = a.scoord3d as dmv.scoord3d.Point\n      const s2 = b.scoord3d as dmv.scoord3d.Point\n      const c1 = s1.graphicData[i].toPrecision(decimals)\n      const c2 = s2.graphicData[i].toPrecision(decimals)\n      if (c1 !== c2) {\n        return false\n      }\n    } else {\n      const s1 = a.scoord3d as dmv.scoord3d.Polygon\n      const s2 = b.scoord3d as dmv.scoord3d.Polygon\n      for (let j = 0; j < s1.graphicData[i].length; ++j) {\n        const c1 = s1.graphicData[i][j].toPrecision(decimals)\n        const c2 = s2.graphicData[i][j].toPrecision(decimals)\n        if (c1 !== c2) {\n          return false\n        }\n      }\n    }\n  }\n  return true\n}\n\nconst _formatRoiStyle = (style: {\n  stroke?: {\n    color?: number[]\n    width?: number\n  }\n  fill?: {\n    color?: number[]\n  }\n  radius?: number\n}): dmv.viewer.ROIStyleOptions => {\n  const stroke = {\n    color: DEFAULT_ROI_STROKE_COLOR,\n    width: DEFAULT_ROI_STROKE_WIDTH\n  }\n  if (style.stroke != null) {\n    if (style.stroke.color != null) {\n      stroke.color = style.stroke.color\n    }\n    if (style.stroke.width != null) {\n      stroke.width = style.stroke.width\n    }\n  }\n  const fill = {\n    color: DEFAULT_ROI_FILL_COLOR\n  }\n  if (style.fill != null) {\n    if (style.fill.color != null) {\n      fill.color = style.fill.color\n    }\n  }\n  return {\n    stroke,\n    fill,\n    image: {\n      circle: {\n        radius: style.radius != null\n          ? style.radius\n          : Math.max(5 - stroke.width, 1),\n        stroke,\n        fill\n      }\n    }\n  }\n}\n\nconst _constructViewers = ({ clients, slide, preload }: {\n  clients: { [key: string]: dwc.api.DICOMwebClient }\n  slide: Slide\n  preload?: boolean\n}): {\n  volumeViewer: dmv.viewer.VolumeImageViewer\n  labelViewer?: dmv.viewer.LabelImageViewer\n} => {\n  console.info(\n    'instantiate viewer for VOLUME images of slide ' +\n    `\"${slide.volumeImages[0].ContainerIdentifier}\"`\n  )\n  try {\n    const volumeViewer = new dmv.viewer.VolumeImageViewer({\n      clientMapping: clients,\n      metadata: slide.volumeImages,\n      controls: ['overview', 'position'],\n      preload: preload,\n      errorInterceptor: (error: CustomError) => {\n        NotificationMiddleware.onError(\n          NotificationMiddlewareContext.DMV, error\n        )\n      }\n    })\n    volumeViewer.activateSelectInteraction({})\n\n    let labelViewer\n    if (slide.labelImages.length > 0) {\n      console.info(\n        'instantiate viewer for LABEL image of slide ' +\n        `\"${slide.labelImages[0].ContainerIdentifier}\"`\n      )\n      labelViewer = new dmv.viewer.LabelImageViewer({\n        client: clients[StorageClasses.VL_WHOLE_SLIDE_MICROSCOPY_IMAGE],\n        metadata: slide.labelImages[0],\n        resizeFactor: 1,\n        orientation: 'vertical',\n        errorInterceptor: (error: CustomError) => {\n          NotificationMiddleware.onError(\n            NotificationMiddlewareContext.DMV,\n            error\n          )\n        }\n      })\n    }\n\n    return { volumeViewer, labelViewer }\n  } catch (error) {\n    // eslint-disable-next-line @typescript-eslint/no-floating-promises\n    NotificationMiddleware.onError(\n      NotificationMiddlewareContext.SLIM,\n      new CustomError(\n        errorTypes.VISUALIZATION,\n        'Failed to instantiate viewer'\n      )\n    )\n    throw error\n  }\n}\n\n/*\n * Check whether the report is structured according to template\n * TID 1500 \"MeasurementReport\".\n */\nconst _implementsTID1500 = (\n  report: dmv.metadata.Comprehensive3DSR\n): boolean => {\n  const templateSeq = report.ContentTemplateSequence\n  if (templateSeq.length > 0) {\n    const tid = templateSeq[0].TemplateIdentifier\n    if (tid === '1500') {\n      return true\n    }\n  }\n  return false\n}\n\n/*\n * Check whether the subject described in the report is a specimen as compared\n * to a patient, fetus, or device.\n */\nconst _describesSpecimenSubject = (\n  report: dmv.metadata.Comprehensive3DSR\n): boolean => {\n  const items = findContentItemsByName({\n    content: report.ContentSequence,\n    name: new dcmjs.sr.coding.CodedConcept({\n      value: '121024',\n      schemeDesignator: 'DCM',\n      meaning: 'Subject Class'\n    })\n  })\n  if (items.length === 0) {\n    return false\n  }\n  const subjectClassItem = items[0] as dcmjs.sr.valueTypes.CodeContentItem\n  const subjectClassValue = subjectClassItem.ConceptCodeSequence[0]\n  const retrievedConcept = new dcmjs.sr.coding.CodedConcept({\n    value: subjectClassValue.CodeValue,\n    meaning: subjectClassValue.CodeMeaning,\n    schemeDesignator: subjectClassValue.CodingSchemeDesignator\n  })\n  const expectedConcept = new dcmjs.sr.coding.CodedConcept({\n    value: '121027',\n    meaning: 'Specimen',\n    schemeDesignator: 'DCM'\n  })\n  if (retrievedConcept.equals(expectedConcept)) {\n    return true\n  }\n  return false\n}\n\n/*\n * Check whether the report contains appropriate graphic ROI annotations.\n */\nconst _containsROIAnnotations = (\n  report: dmv.metadata.Comprehensive3DSR\n): boolean => {\n  const measurements = findContentItemsByName({\n    content: report.ContentSequence,\n    name: new dcmjs.sr.coding.CodedConcept({\n      value: '126010',\n      schemeDesignator: 'DCM',\n      meaning: 'Imaging Measurements'\n    })\n  })\n  if (measurements.length === 0) {\n    return false\n  }\n  const container = measurements[0] as dcmjs.sr.valueTypes.ContainerContentItem\n  const measurementGroups = findContentItemsByName({\n    content: container.ContentSequence,\n    name: new dcmjs.sr.coding.CodedConcept({\n      value: '125007',\n      schemeDesignator: 'DCM',\n      meaning: 'Measurement Group'\n    })\n  })\n\n  let foundRegion = false\n  measurementGroups.forEach((group) => {\n    const container = group as dcmjs.sr.valueTypes.ContainerContentItem\n    const regions = findContentItemsByName({\n      content: container.ContentSequence,\n      name: new dcmjs.sr.coding.CodedConcept({\n        value: '111030',\n        schemeDesignator: 'DCM',\n        meaning: 'Image Region'\n      })\n    })\n    if (regions.length > 0) {\n      if (regions[0].ValueType === dcmjs.sr.valueTypes.ValueTypes.SCOORD3D) {\n        foundRegion = true\n      }\n    }\n  })\n\n  return foundRegion\n}\n\ninterface EvaluationOptions {\n  name: dcmjs.sr.coding.CodedConcept\n  values: dcmjs.sr.coding.CodedConcept[]\n}\n\ninterface Evaluation {\n  name: dcmjs.sr.coding.CodedConcept\n  value: dcmjs.sr.coding.CodedConcept\n}\n\ninterface Measurement {\n  name: dcmjs.sr.coding.CodedConcept\n  value?: number\n  unit: dcmjs.sr.coding.CodedConcept\n}\n\ninterface SlideViewerProps extends RouteComponentProps {\n  slide: Slide\n  clients: { [key: string]: DicomWebManager }\n  studyInstanceUID: string\n  seriesInstanceUID: string\n  app: {\n    name: string\n    version: string\n    uid: string\n    organization?: string\n  }\n  preload?: boolean\n  annotations: AnnotationSettings[]\n  enableAnnotationTools: boolean\n  user?: {\n    name: string\n    email: string\n  }\n  selectedPresentationStateUID?: string\n}\n\ninterface SlideViewerState {\n  visibleRoiUIDs: Set<string>\n  visibleSegmentUIDs: Set<string>\n  visibleMappingUIDs: Set<string>\n  visibleAnnotationGroupUIDs: Set<string>\n  visibleOpticalPathIdentifiers: Set<string>\n  activeOpticalPathIdentifiers: Set<string>\n  presentationStates: dmv.metadata.AdvancedBlendingPresentationState[]\n  selectedPresentationStateUID?: string\n  selectedFinding?: dcmjs.sr.coding.CodedConcept\n  selectedEvaluations: Evaluation[]\n  selectedGeometryType?: string\n  selectedMarkup?: string\n  selectedRoi?: dmv.roi.ROI\n  selectedRoiUIDs: Set<string>\n  generatedReport?: dmv.metadata.Comprehensive3DSR\n  isLoading: boolean\n  isAnnotationModalVisible: boolean\n  isSelectedRoiModalVisible: boolean\n  isHoveredRoiTooltipVisible: boolean\n  hoveredRoi?: dmv.roi.ROI\n  hoveredRoiAttributes: Array<{ name: string, value: string }>\n  hoveredRoiTooltipX: number\n  hoveredRoiTooltipY: number\n  isReportModalVisible: boolean\n  isRoiDrawingActive: boolean\n  isRoiModificationActive: boolean\n  isRoiTranslationActive: boolean\n  isGoToModalVisible: boolean\n  isSelectedMagnificationValid: boolean\n  isSelectedXCoordinateValid: boolean\n  isSelectedYCoordinateValid: boolean\n  selectedXCoordinate?: number\n  validXCoordinateRange: number[]\n  selectedYCoordinate?: number\n  validYCoordinateRange: number[]\n  selectedMagnification?: number\n  areRoisHidden: boolean\n  pixelDataStatistics: {\n    [opticalPathIdentifier: string]: {\n      min: number\n      max: number\n      numFramesSampled: number\n    }\n  }\n  loadingFrames: Set<string>\n}\n\n/**\n * React component for interactive viewing of an individual digital slide,\n * which corresponds to one DICOM Series of DICOM Slide Microscopy images and\n * potentially one or more associated DICOM Series of DICOM SR documents.\n */\nclass SlideViewer extends React.Component<SlideViewerProps, SlideViewerState> {\n  private readonly findingOptions: dcmjs.sr.coding.CodedConcept[] = []\n\n  private readonly evaluationOptions: { [key: string]: EvaluationOptions[] } = {}\n\n  private readonly measurements: Measurement[] = []\n\n  private readonly geometryTypeOptions: { [key: string]: string[] } = {}\n\n  private readonly volumeViewportRef: React.RefObject<HTMLDivElement>\n\n  private readonly labelViewportRef: React.RefObject<HTMLDivElement>\n\n  private volumeViewer: dmv.viewer.VolumeImageViewer\n\n  private labelViewer?: dmv.viewer.LabelImageViewer\n\n  private readonly defaultRoiStyle: dmv.viewer.ROIStyleOptions = {\n    stroke: {\n      color: DEFAULT_ROI_STROKE_COLOR,\n      width: DEFAULT_ROI_STROKE_WIDTH\n    },\n    fill: {\n      color: DEFAULT_ROI_FILL_COLOR\n    },\n    image: {\n      circle: {\n        fill: {\n          color: DEFAULT_ROI_STROKE_COLOR\n        },\n        radius: DEFAULT_ROI_RADIUS\n      }\n    }\n  }\n\n  private roiStyles: {[key: string]: dmv.viewer.ROIStyleOptions} = {}\n\n  private defaultAnnotationStyles: {\n    [annotationUID: string]: {\n      opacity: number\n      color: number[]\n    }\n  } = {}\n\n  private readonly selectionColor: number[] = [140, 184, 198]\n\n  private readonly selectedRoiStyle: dmv.viewer.ROIStyleOptions = {\n    stroke: { color: [...this.selectionColor, 1], width: 3 },\n    fill: { color: [...this.selectionColor, 0.2] },\n    image: {\n      circle: {\n        radius: 5,\n        fill: { color: [...this.selectionColor, 1] }\n      }\n    }\n  }\n\n  constructor (props: SlideViewerProps) {\n    super(props)\n    console.info(\n      `view slide \"${this.props.slide.containerIdentifier}\": `,\n      this.props.slide\n    )\n    const geometryTypeOptions = [\n      'point',\n      'circle',\n      'box',\n      'polygon',\n      'line',\n      'freehandpolygon',\n      'freehandline'\n    ]\n    props.annotations.forEach((annotation: AnnotationSettings) => {\n      const finding = new dcmjs.sr.coding.CodedConcept(annotation.finding)\n      this.findingOptions.push(finding)\n      const key = _buildKey(finding)\n      if (annotation.geometryTypes !== undefined) {\n        this.geometryTypeOptions[key] = annotation.geometryTypes\n      } else {\n        this.geometryTypeOptions[key] = geometryTypeOptions\n      }\n      this.evaluationOptions[key] = []\n      if (annotation.evaluations !== undefined) {\n        annotation.evaluations.forEach(evaluation => {\n          this.evaluationOptions[key].push({\n            name: new dcmjs.sr.coding.CodedConcept(evaluation.name),\n            values: evaluation.values.map(value => {\n              return new dcmjs.sr.coding.CodedConcept(value)\n            })\n          })\n        })\n      }\n      if (annotation.measurements !== undefined) {\n        annotation.measurements.forEach(measurement => {\n          this.measurements.push({\n            name: new dcmjs.sr.coding.CodedConcept(measurement.name),\n            value: undefined,\n            unit: new dcmjs.sr.coding.CodedConcept(measurement.unit)\n          })\n        })\n      }\n      if (annotation.style != null) {\n        this.roiStyles[key] = _formatRoiStyle(annotation.style)\n      } else {\n        this.roiStyles[key] = this.defaultRoiStyle\n      }\n    })\n\n    this.componentSetup = this.componentSetup.bind(this)\n    this.componentCleanup = this.componentCleanup.bind(this)\n\n    this.onWindowResize = this.onWindowResize.bind(this)\n    this.handleRoiDrawing = this.handleRoiDrawing.bind(this)\n    this.handleRoiTranslation = this.handleRoiTranslation.bind(this)\n    this.handleRoiModification = this.handleRoiModification.bind(this)\n    this.handleRoiVisibilityChange = this.handleRoiVisibilityChange.bind(this)\n    this.handleRoiRemoval = this.handleRoiRemoval.bind(this)\n    this.handleRoiSelectionCancellation = this.handleRoiSelectionCancellation.bind(this)\n    this.handleAnnotationConfigurationCancellation = this.handleAnnotationConfigurationCancellation.bind(this)\n    this.handleAnnotationGeometryTypeSelection = this.handleAnnotationGeometryTypeSelection.bind(this)\n    this.handleAnnotationMeasurementActivation = this.handleAnnotationMeasurementActivation.bind(this)\n    this.handleAnnotationFindingSelection = this.handleAnnotationFindingSelection.bind(this)\n    this.handleAnnotationEvaluationSelection = this.handleAnnotationEvaluationSelection.bind(this)\n    this.handleAnnotationEvaluationClearance = this.handleAnnotationEvaluationClearance.bind(this)\n    this.handleAnnotationConfigurationCompletion = this.handleAnnotationConfigurationCompletion.bind(this)\n    this.handleAnnotationSelection = this.handleAnnotationSelection.bind(this)\n    this.handleAnnotationVisibilityChange = this.handleAnnotationVisibilityChange.bind(this)\n    this.handleAnnotationGroupVisibilityChange = this.handleAnnotationGroupVisibilityChange.bind(this)\n    this.handleAnnotationGroupStyleChange = this.handleAnnotationGroupStyleChange.bind(this)\n    this.handleRoiStyleChange = this.handleRoiStyleChange.bind(this)\n    this.handleGoTo = this.handleGoTo.bind(this)\n    this.handleXCoordinateSelection = this.handleXCoordinateSelection.bind(this)\n    this.handleYCoordinateSelection = this.handleYCoordinateSelection.bind(this)\n    this.handleMagnificationSelection = this.handleMagnificationSelection.bind(this)\n    this.handleSlidePositionSelection = this.handleSlidePositionSelection.bind(this)\n    this.handleSlidePositionSelectionCancellation = this.handleSlidePositionSelectionCancellation.bind(this)\n    this.handleReportGeneration = this.handleReportGeneration.bind(this)\n    this.handleReportVerification = this.handleReportVerification.bind(this)\n    this.handleReportCancellation = this.handleReportCancellation.bind(this)\n    this.handleSegmentVisibilityChange = this.handleSegmentVisibilityChange.bind(this)\n    this.handleSegmentStyleChange = this.handleSegmentStyleChange.bind(this)\n    this.handleMappingVisibilityChange = this.handleMappingVisibilityChange.bind(this)\n    this.handleMappingStyleChange = this.handleMappingStyleChange.bind(this)\n    this.handleOpticalPathVisibilityChange = this.handleOpticalPathVisibilityChange.bind(this)\n    this.handleOpticalPathStyleChange = this.handleOpticalPathStyleChange.bind(this)\n    this.handleOpticalPathActivityChange = this.handleOpticalPathActivityChange.bind(this)\n    this.handlePresentationStateSelection = this.handlePresentationStateSelection.bind(this)\n    this.handlePresentationStateReset = this.handlePresentationStateReset.bind(this)\n\n    const { volumeViewer, labelViewer } = _constructViewers({\n      clients: this.props.clients,\n      slide: this.props.slide,\n      preload: this.props.preload\n    })\n    this.volumeViewer = volumeViewer\n    this.labelViewer = labelViewer\n    this.volumeViewportRef = React.createRef<HTMLDivElement>()\n    this.labelViewportRef = React.createRef<HTMLDivElement>()\n\n    /**\n     * Deactivate all optical paths. Visibility will be set later, potentially\n     * using based on available presentation state instances.\n     */\n    this.volumeViewer.getAllOpticalPaths().forEach(opticalPath => {\n      this.volumeViewer.deactivateOpticalPath(opticalPath.identifier)\n    })\n\n    const [offset, size] = this.volumeViewer.boundingBox\n\n    this.state = {\n      selectedRoiUIDs: new Set(),\n      visibleRoiUIDs: new Set(),\n      visibleSegmentUIDs: new Set(),\n      visibleMappingUIDs: new Set(),\n      visibleAnnotationGroupUIDs: new Set(),\n      visibleOpticalPathIdentifiers: new Set(),\n      activeOpticalPathIdentifiers: new Set(),\n      presentationStates: [],\n      selectedFinding: undefined,\n      selectedEvaluations: [],\n      generatedReport: undefined,\n      isLoading: false,\n      isAnnotationModalVisible: false,\n      isSelectedRoiModalVisible: false,\n      isHoveredRoiTooltipVisible: false,\n      hoveredRoiTooltipX: 0,\n      hoveredRoiTooltipY: 0,\n      hoveredRoiAttributes: [],\n      isSelectedMagnificationValid: false,\n      isReportModalVisible: false,\n      isRoiDrawingActive: false,\n      isRoiTranslationActive: false,\n      isRoiModificationActive: false,\n      isGoToModalVisible: false,\n      isSelectedXCoordinateValid: false,\n      isSelectedYCoordinateValid: false,\n      selectedXCoordinate: undefined,\n      validXCoordinateRange: [offset[0], offset[0] + size[0]],\n      selectedYCoordinate: undefined,\n      validYCoordinateRange: [offset[1], offset[1] + size[1]],\n      selectedMagnification: undefined,\n      areRoisHidden: false,\n      pixelDataStatistics: {},\n      selectedPresentationStateUID: this.props.selectedPresentationStateUID,\n      loadingFrames: new Set()\n    }\n  }\n\n  componentDidUpdate (\n    previousProps: SlideViewerProps,\n    previousState: SlideViewerState\n  ): void {\n    /** Fetch data and update the viewports if the route has changed (\n     * i.e., if another series has been selected) or if the client has changed.\n     */\n    if (\n      this.props.location.pathname !== previousProps.location.pathname ||\n      this.props.studyInstanceUID !== previousProps.studyInstanceUID ||\n      this.props.seriesInstanceUID !== previousProps.seriesInstanceUID ||\n      this.props.slide !== previousProps.slide ||\n      this.props.clients !== previousProps.clients\n    ) {\n      if (this.volumeViewportRef.current != null) {\n        this.volumeViewportRef.current.innerHTML = ''\n      }\n      this.volumeViewer.cleanup()\n      if (this.labelViewer != null) {\n        if (this.labelViewportRef.current != null) {\n          this.labelViewportRef.current.innerHTML = ''\n        }\n        this.labelViewer.cleanup()\n      }\n      const { volumeViewer, labelViewer } = _constructViewers({\n        clients: this.props.clients,\n        slide: this.props.slide,\n        preload: this.props.preload\n      })\n      this.volumeViewer = volumeViewer\n      this.labelViewer = labelViewer\n\n      const activeOpticalPathIdentifiers: Set<string> = new Set()\n      const visibleOpticalPathIdentifiers: Set<string> = new Set()\n      this.volumeViewer.getAllOpticalPaths().forEach(opticalPath => {\n        const identifier = opticalPath.identifier\n        if (this.volumeViewer.isOpticalPathVisible(identifier)) {\n          visibleOpticalPathIdentifiers.add(identifier)\n        }\n        if (this.volumeViewer.isOpticalPathActive(identifier)) {\n          activeOpticalPathIdentifiers.add(identifier)\n        }\n      })\n\n      const [offset, size] = this.volumeViewer.boundingBox\n\n      this.setState({\n        visibleRoiUIDs: new Set(),\n        visibleSegmentUIDs: new Set(),\n        visibleMappingUIDs: new Set(),\n        visibleAnnotationGroupUIDs: new Set(),\n        visibleOpticalPathIdentifiers,\n        activeOpticalPathIdentifiers,\n        presentationStates: [],\n        loadingFrames: new Set(),\n        validXCoordinateRange: [offset[0], offset[0] + size[0]],\n        validYCoordinateRange: [offset[1], offset[1] + size[1]]\n      })\n      this.populateViewports()\n    }\n  }\n\n  /**\n   * Retrieve Presentation State instances that reference the any images of\n   * the currently selected series.\n   */\n  loadPresentationStates = (): void => {\n    console.info('search for Presentation State instances')\n    const client = this.props.clients[\n      StorageClasses.ADVANCED_BLENDING_PRESENTATION_STATE\n    ]\n    client.searchForInstances({\n      studyInstanceUID: this.props.studyInstanceUID,\n      queryParams: {\n        Modality: 'PR'\n      }\n    }).then((matchedInstances): void => {\n      if (matchedInstances == null) {\n        matchedInstances = []\n      }\n      matchedInstances.forEach((rawInstance, index) => {\n        const { dataset } = dmv.metadata.formatMetadata(rawInstance)\n        const instance = dataset as dmv.metadata.Instance\n        console.info(`retrieve PR instance \"${instance.SOPInstanceUID}\"`)\n        client.retrieveInstance({\n          studyInstanceUID: this.props.studyInstanceUID,\n          seriesInstanceUID: instance.SeriesInstanceUID,\n          sopInstanceUID: instance.SOPInstanceUID\n        }).then((retrievedInstance): void => {\n          const data = dcmjs.data.DicomMessage.readFile(retrievedInstance)\n          const { dataset } = dmv.metadata.formatMetadata(data.dict)\n          if (this.props.slide.areVolumeImagesMonochrome) {\n            const presentationState = (\n              dataset as\n              unknown as\n              dmv.metadata.AdvancedBlendingPresentationState\n            )\n            let doesMatch = false\n            presentationState.AdvancedBlendingSequence.forEach(blendingItem => {\n              doesMatch = this.props.slide.seriesInstanceUIDs.includes(\n                blendingItem.SeriesInstanceUID\n              )\n            }\n            )\n            if (doesMatch) {\n              console.info(\n                'include Advanced Blending Presentation State instance ' +\n                `\"${presentationState.SOPInstanceUID}\"`\n              )\n              if (\n                index === 0 &&\n                this.props.selectedPresentationStateUID == null\n              ) {\n                this.setPresentationState(presentationState)\n              } else {\n                if (\n                  presentationState.SOPInstanceUID ===\n                  this.props.selectedPresentationStateUID\n                ) {\n                  this.setPresentationState(presentationState)\n                }\n              }\n              this.setState(state => {\n                const mapping: {\n                  [sopInstanceUID: string]:\n                  dmv.metadata.AdvancedBlendingPresentationState\n                } = {}\n                state.presentationStates.forEach(instance => {\n                  mapping[instance.SOPInstanceUID] = instance\n                })\n                mapping[presentationState.SOPInstanceUID] = presentationState\n                return { presentationStates: Object.values(mapping) }\n              })\n            }\n          } else {\n            console.info(\n              `ignore presentation state \"${instance.SOPInstanceUID}\", ` +\n              'application of presentation states for color images ' +\n              'has not (yet) been implemented'\n            )\n          }\n        }).catch((error) => {\n          // eslint-disable-next-line @typescript-eslint/no-floating-promises\n          NotificationMiddleware.onError(\n            NotificationMiddlewareContext.SLIM,\n            new CustomError(\n              errorTypes.VISUALIZATION,\n              'Presentation State could not be loaded'\n            )\n          )\n          console.error(\n            'failed to load presentation state ' +\n            `of SOP instance \"${instance.SOPInstanceUID}\" ` +\n            `of series \"${instance.SeriesInstanceUID}\" ` +\n            `of study \"${this.props.studyInstanceUID}\": `,\n            error\n          )\n        })\n      })\n    }).catch((error) => {\n      console.error(error)\n      // eslint-disable-next-line @typescript-eslint/no-floating-promises\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.VISUALIZATION,\n          'Presentation State could not be loaded'\n        )\n      )\n    })\n  }\n\n  /**\n   * Set presentation state as specified by a DICOM Presentation State instance.\n   */\n  setPresentationState = (\n    presentationState: dmv.metadata.AdvancedBlendingPresentationState\n  ): void => {\n    const opticalPaths = this.volumeViewer.getAllOpticalPaths()\n    console.info(\n      `apply Presentation State instance \"${presentationState.SOPInstanceUID}\"`\n    )\n    const opticalPathStyles: {\n      [opticalPathIdentifier: string]: {\n        opacity: number\n        paletteColorLookupTable?: dmv.color.PaletteColorLookupTable\n        limitValues?: number[]\n      } | null\n    } = {}\n    opticalPaths.forEach(opticalPath => {\n      // First, deactivate and hide all optical paths and reset style\n      const identifier = opticalPath.identifier\n      this.volumeViewer.hideOpticalPath(identifier)\n      this.volumeViewer.deactivateOpticalPath(identifier)\n      const style = this.volumeViewer.getOpticalPathDefaultStyle(identifier)\n      this.volumeViewer.setOpticalPathStyle(identifier, style)\n\n      presentationState.AdvancedBlendingSequence.forEach(blendingItem => {\n        /**\n         * Referenced Instance Sequence should be used instead of Referenced\n         * Image Sequence, but that's easy to mix up and we have encountered\n         * implementations that get it wrong.\n         */\n        let refInstanceItems = blendingItem.ReferencedInstanceSequence\n        if (refInstanceItems === undefined) {\n          refInstanceItems = blendingItem.ReferencedImageSequence\n        }\n        if (refInstanceItems === undefined) {\n          return\n        }\n        refInstanceItems.forEach(imageItem => {\n          const isReferenced = opticalPath.sopInstanceUIDs.includes(\n            imageItem.ReferencedSOPInstanceUID\n          ) as boolean\n          if (isReferenced) {\n            let paletteColorLUT\n            if (blendingItem.PaletteColorLookupTableSequence != null) {\n              const cpLUTItem = blendingItem.PaletteColorLookupTableSequence[0]\n              paletteColorLUT = new dmv.color.PaletteColorLookupTable({\n                uid: (\n                  cpLUTItem.PaletteColorLookupTableUID != null\n                    ? cpLUTItem.PaletteColorLookupTableUID\n                    : ''\n                ),\n                redDescriptor:\n                  cpLUTItem.RedPaletteColorLookupTableDescriptor,\n                greenDescriptor:\n                  cpLUTItem.GreenPaletteColorLookupTableDescriptor,\n                blueDescriptor:\n                  cpLUTItem.BluePaletteColorLookupTableDescriptor,\n                redData: (\n                  (cpLUTItem.RedPaletteColorLookupTableData != null)\n                    ? new Uint16Array(\n                      cpLUTItem.RedPaletteColorLookupTableData\n                    )\n                    : undefined\n                ),\n                greenData: (\n                  (cpLUTItem.GreenPaletteColorLookupTableData != null)\n                    ? new Uint16Array(\n                      cpLUTItem.GreenPaletteColorLookupTableData\n                    )\n                    : undefined\n                ),\n                blueData: (\n                  (cpLUTItem.BluePaletteColorLookupTableData != null)\n                    ? new Uint16Array(\n                      cpLUTItem.BluePaletteColorLookupTableData\n                    )\n                    : undefined\n                ),\n                redSegmentedData: (\n                  (cpLUTItem.SegmentedRedPaletteColorLookupTableData != null)\n                    ? new Uint16Array(\n                      cpLUTItem.SegmentedRedPaletteColorLookupTableData\n                    )\n                    : undefined\n                ),\n                greenSegmentedData: (\n                  (cpLUTItem.SegmentedGreenPaletteColorLookupTableData != null)\n                    ? new Uint16Array(\n                      cpLUTItem.SegmentedGreenPaletteColorLookupTableData\n                    )\n                    : undefined\n                ),\n                blueSegmentedData: (\n                  (cpLUTItem.SegmentedBluePaletteColorLookupTableData != null)\n                    ? new Uint16Array(\n                      cpLUTItem.SegmentedBluePaletteColorLookupTableData\n                    )\n                    : undefined\n                )\n              })\n            }\n\n            let limitValues\n            if (blendingItem.SoftcopyVOILUTSequence != null) {\n              const voiLUTItem = blendingItem.SoftcopyVOILUTSequence[0]\n              const windowCenter = voiLUTItem.WindowCenter\n              const windowWidth = voiLUTItem.WindowWidth\n              limitValues = [\n                windowCenter - windowWidth * 0.5,\n                windowCenter + windowWidth * 0.5\n              ]\n            }\n\n            opticalPathStyles[identifier] = {\n              opacity: 1,\n              paletteColorLookupTable: paletteColorLUT,\n              limitValues: limitValues\n            }\n          }\n        })\n      })\n    })\n\n    const selectedOpticalPathIdentifiers: Set<string> = new Set()\n    Object.keys(opticalPathStyles).forEach(identifier => {\n      const styleOptions = opticalPathStyles[identifier]\n      if (styleOptions != null) {\n        this.volumeViewer.setOpticalPathStyle(identifier, styleOptions)\n        this.volumeViewer.activateOpticalPath(identifier)\n        this.volumeViewer.showOpticalPath(identifier)\n        selectedOpticalPathIdentifiers.add(identifier)\n      } else {\n        this.volumeViewer.hideOpticalPath(identifier)\n        this.volumeViewer.deactivateOpticalPath(identifier)\n      }\n    })\n    const searchParams = new URLSearchParams(this.props.location.search)\n    searchParams.set('state', presentationState.SOPInstanceUID)\n    this.props.navigate(\n      {\n        pathname: this.props.location.pathname,\n        search: searchParams.toString()\n      },\n      { replace: true }\n    )\n    this.setState(state => ({\n      activeOpticalPathIdentifiers: selectedOpticalPathIdentifiers,\n      visibleOpticalPathIdentifiers: selectedOpticalPathIdentifiers,\n      selectedPresentationStateUID: presentationState.SOPInstanceUID\n    }))\n  }\n\n  getRoiStyle = (key?: string): dmv.viewer.ROIStyleOptions => {\n    if (key == null) {\n      return this.defaultRoiStyle\n    }\n    if (this.roiStyles[key] !== undefined) {\n      return this.roiStyles[key]\n    }\n    return this.defaultRoiStyle\n  }\n\n  /**\n   * Retrieve Structured Report instances that contain regions of interests\n   * with 3D spatial coordinates defined in the same frame of reference as the\n   * currently selected series and add them to the VOLUME image viewer.\n   */\n  addAnnotations = (): void => {\n    console.info('search for Comprehensive 3D SR instances')\n    const client = this.props.clients[StorageClasses.COMPREHENSIVE_3D_SR]\n    client.searchForInstances({\n      studyInstanceUID: this.props.studyInstanceUID,\n      queryParams: {\n        Modality: 'SR'\n      }\n    }).then((matchedInstances): void => {\n      if (matchedInstances == null) {\n        matchedInstances = []\n      }\n      matchedInstances.forEach(i => {\n        const { dataset } = dmv.metadata.formatMetadata(i)\n        const instance = dataset as dmv.metadata.Instance\n        if (instance.SOPClassUID === StorageClasses.COMPREHENSIVE_3D_SR) {\n          console.info(`retrieve SR instance \"${instance.SOPInstanceUID}\"`)\n          client.retrieveInstance({\n            studyInstanceUID: this.props.studyInstanceUID,\n            seriesInstanceUID: instance.SeriesInstanceUID,\n            sopInstanceUID: instance.SOPInstanceUID\n          }).then((retrievedInstance): void => {\n            const data = dcmjs.data.DicomMessage.readFile(retrievedInstance)\n            const { dataset } = dmv.metadata.formatMetadata(data.dict)\n            const report = dataset as unknown as dmv.metadata.Comprehensive3DSR\n            /*\n             * Perform a couple of checks to ensure the document content of the\n             * report fullfils the requirements of the application.\n             */\n            if (!_implementsTID1500(report)) {\n              console.debug(\n                `ignore SR document \"${report.SOPInstanceUID}\" ` +\n                'because it is not structured according to template ' +\n                'TID 1500 \"MeasurementReport\"'\n              )\n              return\n            }\n            if (!_describesSpecimenSubject(report)) {\n              console.debug(\n                `ignore SR document \"${report.SOPInstanceUID}\" ` +\n                'because it does not describe a specimen subject'\n              )\n              return\n            }\n            if (!_containsROIAnnotations(report)) {\n              console.debug(\n                `ignore SR document \"${report.SOPInstanceUID}\" ` +\n                'because it does not contain any suitable ROI annotations'\n              )\n              return\n            }\n\n            const content = new MeasurementReport(report)\n            content.ROIs.forEach(roi => {\n              console.info(`add ROI \"${roi.uid}\"`)\n              const scoord3d = roi.scoord3d\n              const image = this.props.slide.volumeImages[0]\n              if (scoord3d.frameOfReferenceUID === image.FrameOfReferenceUID) {\n                /*\n                 * ROIs may get assigned new UIDs upon re-rendering of the\n                 * page and we need to ensure that we don't add them twice.\n                 * The same ROI may be stored in multiple SR documents and\n                 * we don't want them to show up twice.\n                 * TODO: We should probably either \"merge\" measurements and\n                 * quantitative evaluations or pick the ROI from the \"best\"\n                 * available report (COMPLETE and VERIFIED).\n                 */\n                const doesROIExist = this.volumeViewer.getAllROIs().some(\n                  (otherROI: dmv.roi.ROI): boolean => {\n                    return _areROIsEqual(otherROI, roi)\n                  }\n                )\n                if (!doesROIExist) {\n                  try {\n                    // Add ROI without style such that it won't be visible.\n                    this.volumeViewer.addROI(roi, {})\n                  } catch {\n                    console.error(`could not add ROI \"${roi.uid}\"`)\n                  }\n                } else {\n                  console.debug(`skip already existing ROI \"${roi.uid}\"`)\n                }\n              } else {\n                console.debug(\n                  `skip ROI \"${roi.uid}\" ` +\n                  `of SR document \"${report.SOPInstanceUID}\"` +\n                  'because it is defined in another frame of reference'\n                )\n              }\n            })\n          }).catch((error) => {\n            // eslint-disable-next-line @typescript-eslint/no-floating-promises\n            NotificationMiddleware.onError(\n              NotificationMiddlewareContext.SLIM,\n              new CustomError(\n                errorTypes.VISUALIZATION,\n                'Annotations could not be loaded'\n              )\n            )\n            console.error(\n              'failed to load ROIs ' +\n              `of SOP instance \"${instance.SOPInstanceUID}\" ` +\n              `of series \"${instance.SeriesInstanceUID}\" ` +\n              `of study \"${this.props.studyInstanceUID}\": `,\n              error\n            )\n          })\n          /*\n           * React is not aware of the fact that ROIs have been added via the\n           * viewer (the viewport is a ref object) and won't show the\n           * annotations in the user interface unless an update is forced.\n           */\n          this.forceUpdate()\n        }\n      })\n    }).catch((error) => {\n      console.error(error)\n      // eslint-disable-next-line @typescript-eslint/no-floating-promises\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.VISUALIZATION,\n          'Annotations could not be loaded'\n        )\n      )\n    })\n  }\n\n  /**\n   * Retrieve Microscopy Bulk Simple Annotations instances that contain\n   * annotation groups defined in the same frame of reference as the currently\n   * selected series and add them to the VOLUME image viewer.\n   */\n  addAnnotationGroups = (): void => {\n    console.info('search for Microscopy Bulk Simple Annotations instances')\n    const client = this.props.clients[\n      StorageClasses.MICROSCOPY_BULK_SIMPLE_ANNOTATION\n    ]\n    client.searchForSeries({\n      studyInstanceUID: this.props.studyInstanceUID,\n      queryParams: {\n        Modality: 'ANN'\n      }\n    }).then((matchedSeries): void => {\n      if (matchedSeries == null) {\n        matchedSeries = []\n      }\n      matchedSeries.forEach(s => {\n        const { dataset } = dmv.metadata.formatMetadata(s)\n        const series = dataset as dmv.metadata.Series\n        client.retrieveSeriesMetadata({\n          studyInstanceUID: this.props.studyInstanceUID,\n          seriesInstanceUID: series.SeriesInstanceUID\n        }).then((retrievedMetadata): void => {\n          const annotations: dmv.metadata.MicroscopyBulkSimpleAnnotations[] = retrievedMetadata.map(metadata => {\n            return new dmv.metadata.MicroscopyBulkSimpleAnnotations({\n              metadata\n            })\n          })\n          // annotations = annotations.filter(ann => {\n          //   const refImage = this.props.slide.volumeImages[0]\n          //   return (\n          //     ann.FrameOfReferenceUID === refImage.FrameOfReferenceUID &&\n          //     ann.ContainerIdentifier === refImage.ContainerIdentifier\n          //   )\n          // })\n          annotations.forEach(ann => {\n            try {\n              this.volumeViewer.addAnnotationGroups(ann)\n            } catch (error: any) {\n              // eslint-disable-next-line @typescript-eslint/no-floating-promises\n              NotificationMiddleware.onError(\n                NotificationMiddlewareContext.SLIM,\n                new CustomError(\n                  errorTypes.VISUALIZATION,\n                  'Microscopy Bulk Simple Annotations cannot be displayed.'\n                )\n              )\n              // eslint-disable-next-line @typescript-eslint/no-floating-promises\n              console.error('failed to add annotation groups:', error)\n            }\n            ann.AnnotationGroupSequence.forEach(item => {\n              const annotationGroupUID = item.AnnotationGroupUID\n              const finding = item.AnnotationPropertyTypeCodeSequence[0]\n              const key = _buildKey(finding)\n              const style = this.roiStyles[key]\n              // eslint-disable-next-line @typescript-eslint/prefer-optional-chain\n              if (style != null && style.fill != null) {\n                this.volumeViewer.setAnnotationGroupStyle(\n                  annotationGroupUID,\n                  { color: style.fill.color }\n                )\n              }\n            })\n          })\n          /*\n           * React is not aware of the fact that annotation groups have been\n           * added via the viewer (the underlying HTML viewport element is a\n           * ref object) and won't show the annotation groups in the user\n           * interface unless an update is forced.\n           */\n          this.forceUpdate()\n        }).catch((error) => {\n          console.error(error)\n          // eslint-disable-next-line @typescript-eslint/no-floating-promises\n          NotificationMiddleware.onError(\n            NotificationMiddlewareContext.SLIM,\n            new CustomError(\n              errorTypes.VISUALIZATION,\n              'Retrieval of metadata of Microscopy Bulk Simple Annotations ' +\n              'instances failed.'\n            )\n          )\n        })\n      })\n    }).catch((error) => {\n      console.error(error)\n      // eslint-disable-next-line @typescript-eslint/no-floating-promises\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.VISUALIZATION,\n          'Search for Microscopy Bulk Simple Annotations instances failed.'\n        )\n      )\n    })\n  }\n\n  /**\n   * Retrieve Segmentation instances that contain segments defined in the same\n   * frame of reference as the currently selected series and add them to the\n   * VOLUME image viewer.\n   */\n  addSegmentations = (): void => {\n    console.info('search for Segmentation instances')\n    const client = this.props.clients[StorageClasses.SEGMENTATION]\n    client.searchForSeries({\n      studyInstanceUID: this.props.studyInstanceUID,\n      queryParams: {\n        Modality: 'SEG'\n      }\n    }).then((matchedSeries): void => {\n      if (matchedSeries == null) {\n        matchedSeries = []\n      }\n      matchedSeries.forEach((s, i) => {\n        const { dataset } = dmv.metadata.formatMetadata(s)\n        const series = dataset as dmv.metadata.Series\n        client.retrieveSeriesMetadata({\n          studyInstanceUID: this.props.studyInstanceUID,\n          seriesInstanceUID: series.SeriesInstanceUID\n        }).then((retrievedMetadata): void => {\n          const segmentations: dmv.metadata.Segmentation[] = []\n          retrievedMetadata.forEach(metadata => {\n            const seg = new dmv.metadata.Segmentation({ metadata })\n            const refImage = this.props.slide.volumeImages[0]\n            if (\n              seg.FrameOfReferenceUID === refImage.FrameOfReferenceUID &&\n              seg.ContainerIdentifier === refImage.ContainerIdentifier\n            ) {\n              segmentations.push(seg)\n            }\n          })\n          if (segmentations.length > 0) {\n            try {\n              this.volumeViewer.addSegments(segmentations)\n            } catch (error: any) {\n              // eslint-disable-next-line @typescript-eslint/no-floating-promises\n              NotificationMiddleware.onError(\n                NotificationMiddlewareContext.SLIM,\n                new CustomError(\n                  errorTypes.VISUALIZATION,\n                  'Segmentations cannot be displayed'\n                )\n              )\n              console.error('failed to add segments: ', error)\n            }\n            /*\n           * React is not aware of the fact that segments have been added via\n           * the viewer (the underlying HTML viewport element is a ref object)\n           * and won't show the segments in the user interface unless an update\n           * is forced.\n           */\n            this.forceUpdate()\n          }\n        }).catch((error) => {\n          console.error(error)\n          // eslint-disable-next-line @typescript-eslint/no-floating-promises\n          NotificationMiddleware.onError(\n            NotificationMiddlewareContext.SLIM,\n            new CustomError(\n              errorTypes.VISUALIZATION,\n              'Retrieval of metadata of Segmentation instances failed.'\n            )\n          )\n        })\n      })\n    }).catch((error) => {\n      console.error(error)\n      // eslint-disable-next-line @typescript-eslint/no-floating-promises\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.VISUALIZATION,\n          'Search for Segmentation instances failed.'\n        )\n      )\n    })\n  }\n\n  /**\n   * Retrieve Parametric Map instances that contain mappings defined in the same\n   * frame of reference as the currently selected series and add them to the\n   * VOLUME image viewer.\n   */\n  addParametricMaps = (): void => {\n    console.info('search for Parametric Map instances')\n    const client = this.props.clients[StorageClasses.PARAMETRIC_MAP]\n    client.searchForSeries({\n      studyInstanceUID: this.props.studyInstanceUID,\n      queryParams: {\n        Modality: 'OT'\n      }\n    }).then((matchedSeries): void => {\n      if (matchedSeries == null) {\n        matchedSeries = []\n      }\n      matchedSeries.forEach(s => {\n        const { dataset } = dmv.metadata.formatMetadata(s)\n        const series = dataset as dmv.metadata.Series\n        client.retrieveSeriesMetadata({\n          studyInstanceUID: this.props.studyInstanceUID,\n          seriesInstanceUID: series.SeriesInstanceUID\n        }).then((retrievedMetadata): void => {\n          const parametricMaps: dmv.metadata.ParametricMap[] = []\n          retrievedMetadata.forEach(metadata => {\n            const pm = new dmv.metadata.ParametricMap({ metadata })\n            const refImage = this.props.slide.volumeImages[0]\n            if (\n              pm.FrameOfReferenceUID === refImage.FrameOfReferenceUID &&\n              pm.ContainerIdentifier === refImage.ContainerIdentifier\n            ) {\n              parametricMaps.push(pm)\n            } else {\n              console.warn(\n                `skip Parametric Map instance \"${pm.SOPInstanceUID}\"`\n              )\n            }\n          })\n          if (parametricMaps.length > 0) {\n            try {\n              this.volumeViewer.addParameterMappings(parametricMaps)\n            } catch (error: any) {\n              // eslint-disable-next-line @typescript-eslint/no-floating-promises\n              NotificationMiddleware.onError(\n                NotificationMiddlewareContext.SLIM,\n                new CustomError(\n                  errorTypes.VISUALIZATION,\n                  'Parametric Map cannot be displayed'\n                )\n              )\n              console.error('failed to add mappings: ', error)\n            }\n            /*\n           * React is not aware of the fact that mappings have been added via\n           * the viewer (the underlying HTML viewport element is a ref object)\n           * and won't show the mappings in the user interface unless an update\n           * is forced.\n           */\n            this.forceUpdate()\n          }\n        }).catch((error) => {\n          console.error(error)\n          // eslint-disable-next-line @typescript-eslint/no-floating-promises\n          NotificationMiddleware.onError(\n            NotificationMiddlewareContext.SLIM,\n            new CustomError(\n              errorTypes.VISUALIZATION,\n              'Retrieval of metadata of Parametric Map instances failed.'\n            )\n          )\n        })\n      })\n    }).catch((error) => {\n      console.error(error)\n      // eslint-disable-next-line @typescript-eslint/no-floating-promises\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.VISUALIZATION,\n          'Search for Parametric Map instances failed.'\n        )\n      )\n    })\n  }\n\n  /**\n   * Populate viewports of the VOLUME and LABEL image viewers.\n   */\n  populateViewports = (): void => {\n    console.info('populate viewports...')\n    this.setState({\n      isLoading: true,\n      presentationStates: []\n    })\n\n    if (this.volumeViewportRef.current != null) {\n      this.volumeViewer.render({ container: this.volumeViewportRef.current })\n    }\n    if (\n      this.labelViewportRef.current != null &&\n      this.labelViewer != null\n    ) {\n      this.labelViewer.render({ container: this.labelViewportRef.current })\n    }\n\n    // State update will also ensure that the component is re-rendered.\n    this.setState({ isLoading: false })\n\n    this.setDefaultPresentationState()\n    this.loadPresentationStates()\n\n    this.addAnnotations()\n    this.addAnnotationGroups()\n    this.addSegmentations()\n    this.addParametricMaps()\n  }\n\n  onRoiModified = (event: CustomEventInit): void => {\n    // Update state to trigger rendering\n    this.setState(state => ({\n      visibleRoiUIDs: new Set(state.visibleRoiUIDs)\n    }))\n  }\n\n  onWindowResize = (event: Event): void => {\n    console.info('resize viewports')\n    this.volumeViewer.resize()\n    if (this.labelViewer != null) {\n      this.labelViewer.resize()\n    }\n  }\n\n  onRoiDrawn = (event: CustomEventInit): void => {\n    const roi = event.detail.payload as dmv.roi.ROI\n    const selectedFinding = this.state.selectedFinding\n    const selectedEvaluations = this.state.selectedEvaluations\n    if (roi !== undefined && selectedFinding !== undefined) {\n      console.debug(`add ROI \"${roi.uid}\"`)\n      const findingItem = new dcmjs.sr.valueTypes.CodeContentItem({\n        name: new dcmjs.sr.coding.CodedConcept({\n          value: '121071',\n          meaning: 'Finding',\n          schemeDesignator: 'DCM'\n        }),\n        value: selectedFinding,\n        relationshipType: 'CONTAINS'\n      })\n      roi.addEvaluation(findingItem)\n      selectedEvaluations.forEach((evaluation: Evaluation) => {\n        const item = new dcmjs.sr.valueTypes.CodeContentItem({\n          name: evaluation.name,\n          value: evaluation.value,\n          relationshipType: 'CONTAINS'\n        })\n        roi.addEvaluation(item)\n      })\n      const key = _buildKey(selectedFinding)\n      const style = this.getRoiStyle(key)\n      this.volumeViewer.addROI(roi, style)\n      this.setState(state => {\n        const visibleRoiUIDs = state.visibleRoiUIDs\n        visibleRoiUIDs.add(roi.uid)\n        return { visibleRoiUIDs }\n      })\n    } else {\n      console.debug(`could not add ROI \"${roi.uid}\"`)\n    }\n  }\n\n  onRoiDoubleClicked = (event: CustomEventInit): void => {\n    const selectedRoi = event.detail.payload as dmv.roi.ROI\n    if (selectedRoi != null) {\n      this.setState({\n        isSelectedRoiModalVisible: true\n      })\n    } else {\n      this.setState({\n        isSelectedRoiModalVisible: false\n      })\n    }\n  }\n\n  setHoveredRoiAttributes = (hoveredRoi: dmv.roi.ROI): void => {\n    const attributes: Array<{ name: string, value: string }> = []\n    hoveredRoi.evaluations.forEach((\n      item: (\n        dcmjs.sr.valueTypes.TextContentItem |\n        dcmjs.sr.valueTypes.CodeContentItem\n      )\n    ) => {\n      const nameValue = item.ConceptNameCodeSequence[0].CodeValue\n      const nameMeaning = item.ConceptNameCodeSequence[0].CodeMeaning\n      const name = `${nameMeaning}`\n      if (item.ValueType === dcmjs.sr.valueTypes.ValueTypes.CODE) {\n        const codeContentItem = item as dcmjs.sr.valueTypes.CodeContentItem\n        const valueMeaning = codeContentItem.ConceptCodeSequence[0].CodeMeaning\n        // For consistency with Segment and Annotation Group\n        if (nameValue === '276214006') {\n          attributes.push({\n            name: 'Property category',\n            value: `${valueMeaning}`\n          })\n        } else if (nameValue === '121071') {\n          attributes.push({\n            name: 'Property type',\n            value: `${valueMeaning}`\n          })\n        } else if (nameValue === '111001') {\n          attributes.push({\n            name: 'Algorithm Name',\n            value: `${valueMeaning}`\n          })\n        } else {\n          attributes.push({\n            name: name,\n            value: `${valueMeaning}`\n          })\n        }\n      } else if (item.ValueType === dcmjs.sr.valueTypes.ValueTypes.TEXT) {\n        const textContentItem = item as dcmjs.sr.valueTypes.TextContentItem\n        attributes.push({\n          name: name,\n          value: textContentItem.TextValue\n        })\n      }\n    })\n\n    this.setState({ hoveredRoiAttributes: attributes })\n  }\n\n  onPointerMove = (event: CustomEventInit): void => {\n    const { feature: hoveredRoi, event: evt } = event.detail.payload\n    if (hoveredRoi != null) {\n      const originalEvent = evt.originalEvent\n      this.setHoveredRoiAttributes(hoveredRoi)\n      this.setState({\n        isHoveredRoiTooltipVisible: true,\n        hoveredRoi,\n        hoveredRoiTooltipX: originalEvent.clientX,\n        hoveredRoiTooltipY: originalEvent.clientY\n      })\n    } else {\n      this.setState({\n        isHoveredRoiTooltipVisible: false\n      })\n    }\n  }\n\n  onRoiSelected = (event: CustomEventInit): void => {\n    const selectedRoi = event.detail.payload as dmv.roi.ROI\n    if (selectedRoi != null) {\n      console.debug(`selected ROI \"${selectedRoi.uid}\"`)\n      this.volumeViewer.setROIStyle(selectedRoi.uid, this.selectedRoiStyle)\n      const key = _getRoiKey(selectedRoi)\n      this.volumeViewer.getAllROIs().forEach((roi) => {\n        if (roi.uid !== selectedRoi.uid) {\n          this.volumeViewer.setROIStyle(roi.uid, this.getRoiStyle(key))\n        }\n      })\n      this.setState({\n        selectedRoiUIDs: new Set([selectedRoi.uid]),\n        selectedRoi: selectedRoi\n      })\n    } else {\n      this.setState({\n        selectedRoiUIDs: new Set(),\n        selectedRoi: undefined\n      })\n    }\n  }\n\n  handleRoiSelectionCancellation (): void {\n    this.setState({\n      isSelectedRoiModalVisible: false\n    })\n  }\n\n  onLoadingStarted = (event: CustomEventInit): void => {\n    this.setState({ isLoading: true })\n  }\n\n  onLoadingEnded = (event: CustomEventInit): void => {\n    this.setState({ isLoading: false })\n  }\n\n  onFrameLoadingStarted = (event: CustomEventInit): void => {\n    const frameInfo: {\n      studyInstanceUID: string\n      seriesInstanceUID: string\n      sopInstanceUID: string\n      sopClassUID: string\n      frameNumber: string\n      channelIdentifier: string\n    } = event.detail.payload\n    const key: string = `${frameInfo.sopInstanceUID}-${frameInfo.frameNumber}`\n    this.setState(state => {\n      state.loadingFrames.add(key)\n      return state\n    })\n  }\n\n  onFrameLoadingError = (event: CustomEventInit): void => {\n    console.error('Failed to load frame')\n  }\n\n  onLoadingError = (event: CustomEventInit): void => {\n    console.error('Failed to load data')\n    // eslint-disable-next-line @typescript-eslint/no-floating-promises\n    const message = (event.detail?.payload?.message === null ? 'Failed to load data' : event.detail?.payload?.message) as string\n    NotificationMiddleware.onError(\n      NotificationMiddlewareContext.SLIM,\n      new CustomError(\n        errorTypes.VISUALIZATION,\n        message\n      ) as any\n    )\n  }\n\n  onFrameLoadingEnded = (event: CustomEventInit): void => {\n    const frameInfo: {\n      studyInstanceUID: string\n      seriesInstanceUID: string\n      sopInstanceUID: string\n      sopClassUID: string\n      frameNumber: string\n      channelIdentifier: string\n      pixelArray: Uint8Array|Uint16Array|Float32Array|null\n    } = event.detail.payload\n    const key = `${frameInfo.sopInstanceUID}-${frameInfo.frameNumber}`\n    this.setState(state => {\n      state.loadingFrames.delete(key)\n      let isLoading: boolean = false\n      if (state.loadingFrames.size > 0) {\n        isLoading = true\n      }\n      return {\n        isLoading,\n        loadingFrames: state.loadingFrames\n      }\n    })\n    if (\n      frameInfo.sopClassUID === StorageClasses.VL_WHOLE_SLIDE_MICROSCOPY_IMAGE &&\n      this.props.slide.areVolumeImagesMonochrome\n    ) {\n      const opticalPathIdentifier = frameInfo.channelIdentifier\n      if (\n        !(opticalPathIdentifier in this.state.pixelDataStatistics) &&\n        frameInfo.pixelArray != null\n      ) {\n        /*\n         * There are limits on the number of arguments Math.min and Math.max\n         * functions can accept. Therefore, we compute values in smaller chunks.\n         */\n        const size = 2 ** 16\n        const chunks = Math.ceil(frameInfo.pixelArray.length / size)\n        let offset = 0\n        const minValues: number[] = []\n        const maxValues: number[] = []\n        for (let i = 0; i < chunks; i++) {\n          offset = i * size\n          const pixels = frameInfo.pixelArray.slice(offset, offset + size)\n          minValues.push(Math.min(...pixels))\n          maxValues.push(Math.max(...pixels))\n        }\n        const min = Math.min(...minValues)\n        const max = Math.max(...maxValues)\n        this.setState(state => {\n          const stats = state.pixelDataStatistics\n          if (stats[opticalPathIdentifier] != null) {\n            stats[opticalPathIdentifier] = {\n              min: Math.min(stats[opticalPathIdentifier].min, min),\n              max: Math.max(stats[opticalPathIdentifier].max, max),\n              numFramesSampled: stats[opticalPathIdentifier].numFramesSampled + 1\n            }\n          } else {\n            stats[opticalPathIdentifier] = {\n              min: min,\n              max: max,\n              numFramesSampled: 1\n            }\n          }\n          if (state.selectedPresentationStateUID == null) {\n            const style = {\n              ...this.volumeViewer.getOpticalPathStyle(opticalPathIdentifier)\n            }\n            style.limitValues = [\n              stats[opticalPathIdentifier].min,\n              stats[opticalPathIdentifier].max\n            ]\n            this.volumeViewer.setOpticalPathStyle(opticalPathIdentifier, style)\n          }\n          return state\n        })\n      }\n    }\n  }\n\n  onRoiRemoved = (event: CustomEventInit): void => {\n    const roi = event.detail.payload as dmv.roi.ROI\n    console.debug(`removed ROI \"${roi.uid}\"`)\n  }\n\n  componentCleanup (): void {\n    document.body.removeEventListener(\n      'dicommicroscopyviewer_roi_drawn',\n      this.onRoiDrawn\n    )\n    document.body.removeEventListener(\n      'dicommicroscopyviewer_roi_selected',\n      this.onRoiSelected\n    )\n    document.body.removeEventListener(\n      'dicommicroscopyviewer_roi_double_clicked',\n      this.onRoiDoubleClicked\n    )\n    document.body.removeEventListener(\n      'dicommicroscopyviewer_pointer_move',\n      this.onPointerMove\n    )\n    document.body.removeEventListener(\n      'dicommicroscopyviewer_roi_removed',\n      this.onRoiRemoved\n    )\n    document.body.removeEventListener(\n      'dicommicroscopyviewer_roi_modified',\n      this.onRoiModified\n    )\n    document.body.removeEventListener(\n      'dicommicroscopyviewer_loading_started',\n      this.onLoadingStarted\n    )\n    document.body.removeEventListener(\n      'dicommicroscopyviewer_loading_ended',\n      this.onLoadingEnded\n    )\n    document.body.removeEventListener(\n      'dicommicroscopyviewer_frame_loading_started',\n      this.onFrameLoadingStarted\n    )\n    document.body.removeEventListener(\n      'dicommicroscopyviewer_frame_loading_ended',\n      this.onFrameLoadingEnded\n    )\n    document.body.removeEventListener(\n      'keyup',\n      this.onKeyUp\n    )\n    window.removeEventListener('resize', this.onWindowResize)\n\n    this.volumeViewer.cleanup()\n    if (this.labelViewer != null) {\n      this.labelViewer.cleanup()\n    }\n    /*\n     * FIXME: React appears to not clean the content of referenced\n     * HTMLDivElement objects when the page is reloaded. As a consequence,\n     * optical paths and other display items cannot be toggled or updated after\n     * a manual page reload. I have tried using ref callbacks and passing the\n     * ref objects from the parent component via the props. Both didn't work\n     * either.\n     */\n  }\n\n  onKeyUp = (event: KeyboardEvent): void => {\n    if (event.key === 'Escape') {\n      if (this.state.isRoiDrawingActive) {\n        console.info('deactivate drawing of ROIs')\n        this.volumeViewer.deactivateDrawInteraction()\n        this.volumeViewer.activateSelectInteraction({})\n      } else if (this.state.isRoiModificationActive) {\n        console.info('deactivate modification of ROIs')\n        this.volumeViewer.deactivateModifyInteraction()\n        this.volumeViewer.activateSelectInteraction({})\n      } else if (this.state.isRoiTranslationActive) {\n        console.info('deactivate modification of ROIs')\n        this.volumeViewer.deactivateTranslateInteraction()\n        this.volumeViewer.activateSelectInteraction({})\n      }\n      this.setState({\n        isAnnotationModalVisible: false,\n        isSelectedRoiModalVisible: false,\n        isRoiTranslationActive: false,\n        isRoiDrawingActive: false,\n        isRoiModificationActive: false,\n        isGoToModalVisible: false\n      })\n    } else if (event.altKey) {\n      if (event.code === 'KeyD') {\n        this.handleRoiDrawing()\n      } else if (event.code === 'KeyM') {\n        this.handleRoiModification()\n      } else if (event.code === 'KeyT') {\n        this.handleRoiTranslation()\n      } else if (event.code === 'KeyR') {\n        this.handleRoiRemoval()\n      } else if (event.code === 'KeyV') {\n        this.handleRoiVisibilityChange()\n      } else if (event.code === 'KeyS') {\n        this.handleReportGeneration()\n      } else if (event.code === 'KeyG') {\n        this.handleGoTo()\n      }\n    }\n  }\n\n  componentWillUnmount (): void {\n    this.volumeViewer.cleanup()\n    if (this.labelViewer != null) {\n      this.labelViewer.cleanup()\n    }\n    window.removeEventListener('beforeunload', this.componentCleanup)\n  }\n\n  componentSetup (): void {\n    document.body.addEventListener(\n      'dicommicroscopyviewer_roi_drawn',\n      this.onRoiDrawn\n    )\n    document.body.addEventListener(\n      'dicommicroscopyviewer_roi_selected',\n      this.onRoiSelected\n    )\n    document.body.addEventListener(\n      'dicommicroscopyviewer_roi_double_clicked',\n      this.onRoiDoubleClicked\n    )\n    document.body.addEventListener(\n      'dicommicroscopyviewer_pointer_move',\n      this.onPointerMove\n    )\n    document.body.addEventListener(\n      'dicommicroscopyviewer_roi_removed',\n      this.onRoiRemoved\n    )\n    document.body.addEventListener(\n      'dicommicroscopyviewer_roi_modified',\n      this.onRoiModified\n    )\n    document.body.addEventListener(\n      'dicommicroscopyviewer_loading_started',\n      this.onLoadingStarted\n    )\n    document.body.addEventListener(\n      'dicommicroscopyviewer_loading_ended',\n      this.onLoadingEnded\n    )\n    document.body.addEventListener(\n      'dicommicroscopyviewer_loading_error',\n      this.onLoadingError\n    )\n    document.body.addEventListener(\n      'dicommicroscopyviewer_frame_loading_started',\n      this.onFrameLoadingStarted\n    )\n    document.body.addEventListener(\n      'dicommicroscopyviewer_frame_loading_ended',\n      this.onFrameLoadingEnded\n    )\n    document.body.addEventListener(\n      'dicommicroscopyviewer_frame_loading_error',\n      this.onFrameLoadingError\n    )\n    document.body.addEventListener(\n      'keyup',\n      this.onKeyUp\n    )\n    window.addEventListener('beforeunload', this.componentCleanup)\n    window.addEventListener('resize', this.onWindowResize)\n  }\n\n  componentDidMount (): void {\n    this.componentSetup()\n    this.populateViewports()\n\n    if (!this.props.slide.areVolumeImagesMonochrome) {\n      let hasICCProfile = false\n      const image = this.props.slide.volumeImages[0]\n      const metadataItem = image.OpticalPathSequence[0]\n      if (metadataItem.ICCProfile == null) {\n        if ('OpticalPathSequence' in image.bulkdataReferences) {\n          // @ts-expect-error\n          const bulkdataItem = image.bulkdataReferences.OpticalPathSequence[0]\n          if ('ICCProfile' in bulkdataItem) {\n            hasICCProfile = true\n          }\n        }\n      } else {\n        hasICCProfile = true\n      }\n      if (!hasICCProfile) {\n        // eslint-disable-next-line @typescript-eslint/no-floating-promises\n        message.warning('No ICC Profile was found for color images')\n      }\n    }\n  }\n\n  /**\n   * Handler that gets called when a finding has been selected for annotation.\n   *\n   * @param value - Code value of the coded finding that got selected\n   * @param option - Option that got selected\n   */\n  handleAnnotationFindingSelection (\n    value: string,\n    option: any\n  ): void {\n    this.findingOptions.forEach(finding => {\n      if (finding.CodeValue === value) {\n        console.info(`selected finding \"${finding.CodeMeaning}\"`)\n        this.setState({\n          selectedFinding: finding,\n          selectedEvaluations: []\n        })\n      }\n    })\n  }\n\n  /**\n   * Handler that gets called when a geometry type has been selected for\n   * annotation.\n   *\n   * @param value - Code value of the coded finding that got selected\n   * @param option - Option that got selected\n   */\n  handleAnnotationGeometryTypeSelection (value: string, option: any): void {\n    this.setState({ selectedGeometryType: value })\n  }\n\n  /**\n   * Handler that gets called when measurements have been selected for\n   * annotation.\n   */\n  handleAnnotationMeasurementActivation (event: any): void {\n    const active: boolean = event.target.checked\n    if (active) {\n      this.setState({ selectedMarkup: 'measurement' })\n    } else {\n      this.setState({ selectedMarkup: undefined })\n    }\n  }\n\n  /**\n   * Handler that gets called when an evaluation has been selected for an\n   * annotation.\n   *\n   * @param value - Code value of the coded evaluation that got selected\n   * @param option - Option that got selected\n   */\n  handleAnnotationEvaluationSelection (\n    value: string,\n    option: any\n  ): void {\n    const selectedFinding = this.state.selectedFinding\n    if (selectedFinding !== undefined) {\n      const key = _buildKey(selectedFinding)\n      const name = option.label\n      this.evaluationOptions[key].forEach(evaluation => {\n        if (\n          evaluation.name.CodeValue === name.CodeValue &&\n          evaluation.name.CodingSchemeDesignator === name.CodingSchemeDesignator\n        ) {\n          evaluation.values.forEach(code => {\n            if (code.CodeValue === value) {\n              const filteredEvaluations = this.state.selectedEvaluations.filter(\n                (item: Evaluation) => item.name !== evaluation.name\n              )\n              this.setState({\n                selectedEvaluations: [\n                  ...filteredEvaluations,\n                  { name: name, value: code }\n                ]\n              })\n            }\n          })\n        }\n      })\n    }\n  }\n\n  /**\n   * Handler that gets called when an evaluation has been cleared for an\n   * annotation.\n   */\n  handleAnnotationEvaluationClearance (): void {\n    this.setState({\n      selectedEvaluations: []\n    })\n  }\n\n  handleXCoordinateSelection (value: any): void {\n    if (value != null) {\n      const x = Number(value)\n      const start = this.state.validXCoordinateRange[0]\n      const end = this.state.validXCoordinateRange[1]\n      if (x >= start && x <= end) {\n        this.setState({\n          selectedXCoordinate: x,\n          isSelectedXCoordinateValid: true\n        })\n        return\n      }\n    }\n    this.setState({\n      selectedXCoordinate: undefined,\n      isSelectedXCoordinateValid: false\n    })\n  }\n\n  handleYCoordinateSelection (value: any): void {\n    if (value != null) {\n      const y = Number(value)\n      const start = this.state.validYCoordinateRange[0]\n      const end = this.state.validYCoordinateRange[1]\n      if (y >= start && y <= end) {\n        this.setState({\n          selectedYCoordinate: y,\n          isSelectedYCoordinateValid: true\n        })\n        return\n      }\n    }\n    this.setState({\n      selectedYCoordinate: undefined,\n      isSelectedYCoordinateValid: false\n    })\n  }\n\n  handleMagnificationSelection (value: any): void {\n    if (value != null) {\n      if (value > 0 && value <= 40) {\n        this.setState({\n          selectedMagnification: Number(value),\n          isSelectedMagnificationValid: true\n        })\n        return\n      }\n    }\n    this.setState({\n      selectedMagnification: undefined,\n      isSelectedMagnificationValid: false\n    })\n  }\n\n  /**\n   * Handler that gets called when the selection of slide position was\n   * completed.\n   */\n  handleSlidePositionSelection (): void {\n    if (\n      this.state.isSelectedXCoordinateValid &&\n      this.state.isSelectedYCoordinateValid &&\n      this.state.isSelectedMagnificationValid &&\n      this.state.selectedXCoordinate != null &&\n      this.state.selectedYCoordinate != null &&\n      this.state.selectedMagnification != null\n    ) {\n      console.info(\n        'select slide position ' +\n        `(${this.state.selectedXCoordinate}, ` +\n        `${this.state.selectedYCoordinate}) ` +\n        `at ${this.state.selectedMagnification}x magnification`\n      )\n\n      const factor = this.state.selectedMagnification\n      /**\n       * On an optical microscope an objective with 1x magnification\n       * corresponds to approximately 10 micrometer pixel spacing\n       * (due to the ocular).\n       */\n      const targetPixelSpacing = 0.01 / factor\n      const diffs = []\n      for (let i = 0; i < this.volumeViewer.numLevels; i++) {\n        const actualPixelSpacing = this.volumeViewer.getPixelSpacing(i)[0]\n        diffs.push(Math.abs(targetPixelSpacing - actualPixelSpacing))\n      }\n      const level = diffs.indexOf(Math.min(...diffs))\n      this.volumeViewer.navigate({\n        position: [\n          this.state.selectedXCoordinate,\n          this.state.selectedYCoordinate\n        ],\n        level: level\n      })\n      const point = new dmv.scoord3d.Point({\n        coordinates: [\n          this.state.selectedXCoordinate,\n          this.state.selectedYCoordinate,\n          0\n        ],\n        frameOfReferenceUID: this.volumeViewer.frameOfReferenceUID\n      })\n      const roi = new dmv.roi.ROI({ scoord3d: point })\n      this.volumeViewer.addROI(roi, this.defaultRoiStyle)\n      this.setState(state => {\n        const visibleRoiUIDs = state.visibleRoiUIDs\n        visibleRoiUIDs.add(roi.uid)\n        return {\n          visibleRoiUIDs,\n          isGoToModalVisible: false\n        }\n      })\n    }\n  }\n\n  /**\n   * Handler that gets called when the selection of a slide position was\n   * canceled.\n   */\n  handleSlidePositionSelectionCancellation (): void {\n    console.log('cancel slide position selection')\n    this.setState({\n      isGoToModalVisible: false,\n      isSelectedXCoordinateValid: false,\n      isSelectedYCoordinateValid: false,\n      isSelectedMagnificationValid: false,\n      selectedXCoordinate: undefined,\n      selectedYCoordinate: undefined,\n      selectedMagnification: undefined\n    })\n  }\n\n  /**\n   * Handler that gets called when annotation configuration has been completed.\n   */\n  handleAnnotationConfigurationCompletion (): void {\n    console.debug('complete annotation configuration')\n    const finding = this.state.selectedFinding\n    const geometryType = this.state.selectedGeometryType\n    const markup = this.state.selectedMarkup\n    if (geometryType !== undefined && finding !== undefined) {\n      this.volumeViewer.activateDrawInteraction({ geometryType, markup })\n      this.setState({\n        isAnnotationModalVisible: false,\n        isRoiDrawingActive: true\n      })\n    } else {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.VISUALIZATION,\n          'Could not complete annotation configuration'\n        )\n      )\n    }\n  }\n\n  /**\n   * Handler that gets called when annotation configuration has been cancelled.\n   */\n  handleAnnotationConfigurationCancellation (): void {\n    console.debug('cancel annotation configuration')\n    this.setState({\n      isAnnotationModalVisible: false,\n      isRoiDrawingActive: false\n    })\n  }\n\n  /**\n   * Handler that gets called when a report should be generated for the current\n   * set of annotations.\n   */\n  handleReportGeneration (): void {\n    console.info('save ROIs')\n    const rois = this.volumeViewer.getAllROIs()\n    const opticalPaths = this.volumeViewer.getAllOpticalPaths()\n    const metadata = this.volumeViewer.getOpticalPathMetadata(\n      opticalPaths[0].identifier\n    )\n    // Metadata should be sorted such that the image with the highest\n    // resolution is the last item in the array.\n    const refImage = metadata[metadata.length - 1]\n    // We assume that there is only one specimen (tissue section) per\n    // ontainer (slide). Only the tissue section is tracked with a unique\n    // identifier, even if the section may be composed of different biological\n    // samples.\n    if (refImage.SpecimenDescriptionSequence.length > 1) {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.VISUALIZATION,\n          'More than one specimen has been described for the slide'\n        )\n      )\n    }\n    const refSpecimen = refImage.SpecimenDescriptionSequence[0]\n\n    console.debug('create Observation Context')\n    let observer\n    if (this.props.user !== undefined) {\n      observer = new dcmjs.sr.templates.PersonObserverIdentifyingAttributes({\n        name: this.props.user.name,\n        loginName: this.props.user.email\n      })\n    } else {\n      console.warn('no user information available')\n      observer = new dcmjs.sr.templates.PersonObserverIdentifyingAttributes({\n        name: 'ANONYMOUS'\n      })\n    }\n    const observationContext = new dcmjs.sr.templates.ObservationContext({\n      observerPersonContext: new dcmjs.sr.templates.ObserverContext({\n        observerType: new dcmjs.sr.coding.CodedConcept({\n          value: '121006',\n          schemeDesignator: 'DCM',\n          meaning: 'Person'\n        }),\n        observerIdentifyingAttributes: observer\n      }),\n      observerDeviceContext: new dcmjs.sr.templates.ObserverContext({\n        observerType: new dcmjs.sr.coding.CodedConcept({\n          value: '121007',\n          schemeDesignator: 'DCM',\n          meaning: 'Device'\n        }),\n        observerIdentifyingAttributes:\n          new dcmjs.sr.templates.DeviceObserverIdentifyingAttributes({\n            uid: this.props.app.uid,\n            manufacturerName: 'MGH Computational Pathology',\n            modelName: this.props.app.name\n          })\n      }),\n      subjectContext: new dcmjs.sr.templates.SubjectContext({\n        subjectClass: new dcmjs.sr.coding.CodedConcept({\n          value: '121027',\n          schemeDesignator: 'DCM',\n          meaning: 'Specimen'\n        }),\n        subjectClassSpecificContext:\n          new dcmjs.sr.templates.SubjectContextSpecimen({\n            uid: refSpecimen.SpecimenUID,\n            identifier: refSpecimen.SpecimenIdentifier,\n            containerIdentifier: refImage.ContainerIdentifier\n          })\n      })\n    })\n\n    console.debug('encode Imaging Measurements')\n    const imagingMeasurements: dcmjs.sr.valueTypes.ContainerContentItem[] = []\n    for (let i = 0; i < rois.length; i++) {\n      const roi = rois[i]\n      if (!this.state.visibleRoiUIDs.has(roi.uid)) {\n        continue\n      }\n      let findingType = roi.evaluations.find(\n        (item: dcmjs.sr.valueTypes.ContentItem) => {\n          return item.ConceptNameCodeSequence[0].CodeValue === '121071'\n        }\n      )\n      if (findingType === undefined) {\n        NotificationMiddleware.onError(\n          NotificationMiddlewareContext.SLIM,\n          new CustomError(\n            errorTypes.ENCODINGANDDECODING,\n            `No finding type was specified for ROI \"${roi.uid}\"`\n          )\n        )\n      }\n      findingType = findingType as dcmjs.sr.valueTypes.CodeContentItem\n      const group = new dcmjs.sr.templates.PlanarROIMeasurementsAndQualitativeEvaluations({\n        trackingIdentifier: new dcmjs.sr.templates.TrackingIdentifier({\n          uid: roi.properties.trackingUID ?? roi.uid,\n          identifier: `ROI #${i + 1}`\n        }),\n        referencedRegion: new dcmjs.sr.contentItems.ImageRegion3D({\n          graphicType: roi.scoord3d.graphicType,\n          graphicData: roi.scoord3d.graphicData,\n          frameOfReferenceUID: roi.scoord3d.frameOfReferenceUID\n        }),\n        findingType: new dcmjs.sr.coding.CodedConcept({\n          value: findingType.ConceptCodeSequence[0].CodeValue,\n          schemeDesignator:\n            findingType.ConceptCodeSequence[0].CodingSchemeDesignator,\n          meaning: findingType.ConceptCodeSequence[0].CodeMeaning\n        }),\n        qualitativeEvaluations: roi.evaluations.filter(\n          (item: dcmjs.sr.valueTypes.ContentItem) => {\n            return item.ConceptNameCodeSequence[0].CodeValue !== '121071'\n          }\n        ),\n        measurements: roi.measurements\n      })\n      const measurements = group as dcmjs.sr.valueTypes.ContainerContentItem[]\n      measurements[0].ContentTemplateSequence = [{\n        MappingResource: 'DCMR',\n        TemplateIdentifier: '1410'\n      }]\n      imagingMeasurements.push(...measurements)\n    }\n\n    console.debug('create Measurement Report document content')\n    const measurementReport = new dcmjs.sr.templates.MeasurementReport({\n      languageOfContentItemAndDescendants: new dcmjs.sr.templates.LanguageOfContentItemAndDescendants({}),\n      observationContext: observationContext,\n      procedureReported: new dcmjs.sr.coding.CodedConcept({\n        value: '112703',\n        schemeDesignator: 'DCM',\n        meaning: 'Whole Slide Imaging'\n      }),\n      imagingMeasurements: imagingMeasurements\n    })\n\n    console.info('create Comprehensive 3D SR document')\n    const dataset = new dcmjs.sr.documents.Comprehensive3DSR({\n      content: measurementReport[0],\n      evidence: [refImage],\n      seriesInstanceUID: dcmjs.data.DicomMetaDictionary.uid(),\n      seriesNumber: 1,\n      seriesDescription: 'Annotation',\n      sopInstanceUID: dcmjs.data.DicomMetaDictionary.uid(),\n      instanceNumber: 1,\n      manufacturer: 'MGH Computational Pathology',\n      previousVersions: undefined // TODO\n    })\n\n    this.setState({\n      isReportModalVisible: true,\n      generatedReport: dataset as dmv.metadata.Comprehensive3DSR\n    })\n  }\n\n  /**\n   * Handler that gets called when a report should be verified. The current\n   * list of annotations will be presented to the user together with other\n   * pertinent metadata about the patient, study, and specimen.\n   */\n  handleReportVerification (): void {\n    console.info('verfied report')\n\n    const report = this.state.generatedReport\n    if (report !== undefined) {\n      const dataset = report as unknown as dmv.metadata.Comprehensive3DSR\n      console.debug('create File Meta Information')\n      const fileMetaInformationVersionArray = new Uint8Array(2)\n      fileMetaInformationVersionArray[1] = 1\n      const fileMeta = {\n        // FileMetaInformationVersion\n        '00020001': {\n          Value: [fileMetaInformationVersionArray.buffer],\n          vr: 'OB'\n        },\n        // MediaStorageSOPClassUID\n        '00020002': {\n          Value: [dataset.SOPClassUID],\n          vr: 'UI'\n        },\n        // MediaStorageSOPInstanceUID\n        '00020003': {\n          Value: [dataset.SOPInstanceUID],\n          vr: 'UI'\n        },\n        // TransferSyntaxUID\n        '00020010': {\n          Value: ['1.2.840.10008.1.2.1'],\n          vr: 'UI'\n        },\n        // ImplementationClassUID\n        '00020012': {\n          Value: [this.props.app.uid],\n          vr: 'UI'\n        }\n      }\n\n      console.info('store Comprehensive 3D SR document')\n      const writer = new dcmjs.data.DicomDict(fileMeta)\n      writer.dict = dcmjs.data.DicomMetaDictionary.denaturalizeDataset(dataset)\n      const buffer = writer.write()\n      const client = this.props.clients[StorageClasses.COMPREHENSIVE_3D_SR]\n      client.storeInstances({ datasets: [buffer] }).then(\n        (response: any) => message.info('Annotations were saved.')\n      ).catch((error) => {\n        console.error(error)\n        // eslint-disable-next-line @typescript-eslint/no-floating-promises\n        NotificationMiddleware.onError(\n          NotificationMiddlewareContext.SLIM,\n          new CustomError(\n            errorTypes.ENCODINGANDDECODING,\n            'Annotations could not be saved'\n          )\n        )\n      })\n    }\n    this.setState({\n      isReportModalVisible: false,\n      generatedReport: undefined\n    })\n  }\n\n  /**\n   * Handler that gets called when report generation has been cancelled.\n   */\n  handleReportCancellation (): void {\n    this.setState({\n      isReportModalVisible: false,\n      generatedReport: undefined\n    })\n  }\n\n  /**\n   * Handler that gets called when an annotation has been selected from the\n   * current list of annotations.\n   */\n  handleAnnotationSelection ({ roiUID }: { roiUID: string }): void {\n    console.log(`selected ROI ${roiUID}`)\n    this.setState({ selectedRoiUIDs: new Set([roiUID]) })\n    this.volumeViewer.getAllROIs().forEach((roi) => {\n      let style = {}\n      if (roi.uid === roiUID) {\n        style = this.selectedRoiStyle\n        this.setState(state => {\n          const visibleRoiUIDs = state.visibleRoiUIDs\n          visibleRoiUIDs.add(roi.uid)\n          return { visibleRoiUIDs }\n        })\n      } else {\n        if (this.state.visibleRoiUIDs.has(roi.uid)) {\n          const key = _getRoiKey(roi)\n          style = this.getRoiStyle(key)\n        }\n      }\n      this.volumeViewer.setROIStyle(roi.uid, style)\n    })\n  }\n\n  /**\n   * Handle toggling of annotation visibility, i.e., whether a given\n   * annotation should be either displayed or hidden by the viewer.\n   */\n  handleAnnotationVisibilityChange ({ roiUID, isVisible }: {\n    roiUID: string\n    isVisible: boolean\n  }): void {\n    if (isVisible) {\n      console.info(`show ROI ${roiUID}`)\n      const roi = this.volumeViewer.getROI(roiUID)\n      const key = _getRoiKey(roi)\n      const style = this.getRoiStyle(key)\n      this.volumeViewer.setROIStyle(roi.uid, style)\n      this.setState(state => {\n        const visibleRoiUIDs = state.visibleRoiUIDs\n        visibleRoiUIDs.add(roi.uid)\n        return { visibleRoiUIDs }\n      })\n    } else {\n      console.info(`hide ROI ${roiUID}`)\n      this.setState(state => {\n        const selectedRoiUIDs = state.selectedRoiUIDs\n        selectedRoiUIDs.delete(roiUID)\n        const visibleRoiUIDs = state.visibleRoiUIDs\n        visibleRoiUIDs.delete(roiUID)\n        return { visibleRoiUIDs, selectedRoiUIDs }\n      })\n      this.volumeViewer.setROIStyle(roiUID, {})\n    }\n  }\n\n  /**\n   * Handle toggling of annotation group visibility, i.e., whether a given\n   * annotation group should be either displayed or hidden by the viewer.\n   */\n  handleAnnotationGroupVisibilityChange ({ annotationGroupUID, isVisible }: {\n    annotationGroupUID: string\n    isVisible: boolean\n  }): void {\n    console.log(`change visibility of annotation group ${annotationGroupUID}`)\n    if (isVisible) {\n      console.info(`show annotation group ${annotationGroupUID}`)\n      try {\n        this.volumeViewer.showAnnotationGroup(annotationGroupUID)\n      } catch (error) {\n        // eslint-disable-next-line @typescript-eslint/no-floating-promises\n        NotificationMiddleware.onError(\n          NotificationMiddlewareContext.SLIM,\n          new CustomError(\n            errorTypes.VISUALIZATION,\n            'Failed to show annotation group.'\n          )\n        )\n        throw error\n      }\n      this.setState(state => {\n        const visibleAnnotationGroupUIDs = new Set(\n          state.visibleAnnotationGroupUIDs\n        )\n        visibleAnnotationGroupUIDs.add(annotationGroupUID)\n        return { visibleAnnotationGroupUIDs }\n      })\n    } else {\n      console.info(`hide annotation group ${annotationGroupUID}`)\n      this.volumeViewer.hideAnnotationGroup(annotationGroupUID)\n      this.setState(state => {\n        const visibleAnnotationGroupUIDs = new Set(\n          state.visibleAnnotationGroupUIDs\n        )\n        visibleAnnotationGroupUIDs.delete(annotationGroupUID)\n        return { visibleAnnotationGroupUIDs }\n      })\n    }\n  }\n\n  /**\n   * Handle change of annotation group style.\n   */\n  handleAnnotationGroupStyleChange ({ uid, styleOptions }: {\n    uid: string\n    styleOptions: {\n      opacity?: number\n      color?: number[]\n      measurement?: dcmjs.sr.coding.CodedConcept\n    }\n  }): void {\n    console.log(`change style of annotation group ${uid}`)\n    try {\n      this.volumeViewer.setAnnotationGroupStyle(\n        uid,\n        styleOptions\n      )\n    } catch (error) {\n      // eslint-disable-next-line @typescript-eslint/no-floating-promises\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.VISUALIZATION,\n          'Failed to change style of annotation group.'\n        )\n      )\n      throw error\n    }\n  }\n\n  generateRoiStyle (\n    styleOptions: {\n      opacity?: number\n      color?: number[]\n    }): dmv.viewer.ROIStyleOptions {\n    const opacity = styleOptions.opacity ?? DEFAULT_ANNOTATION_OPACITY\n    const strokeColor = styleOptions.color ?? DEFAULT_ANNOTATION_STROKE_COLOR\n    const fillColor = strokeColor.map((c) => Math.min(c + 25, 255))\n    const style = _formatRoiStyle({\n      fill: { color: [...fillColor, opacity] },\n      stroke: { color: [...strokeColor, opacity] },\n      radius: this.defaultRoiStyle.stroke?.width\n    })\n    return style\n  }\n\n  handleRoiStyleChange ({ uid, styleOptions }: {\n    uid: string\n    styleOptions: {\n      opacity: number\n      color: number[]\n    }\n  }): void {\n    console.log(`change style of ROI ${uid}`)\n    try {\n      this.defaultAnnotationStyles[uid] = styleOptions\n      const style = this.generateRoiStyle(styleOptions)\n\n      const roi = this.volumeViewer.getROI(uid)\n      const key = _getRoiKey(roi) as string\n      this.roiStyles[key] = style\n      this.volumeViewer.setROIStyle(uid, style)\n      this.state.visibleRoiUIDs.add(uid)\n    } catch (error) {\n      // eslint-disable-next-line @typescript-eslint/no-floating-promises\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.VISUALIZATION,\n          'Failed to change style of ROI.'\n        )\n      )\n      throw error\n    }\n  }\n\n  /**\n   * Handle toggling of segment visibility, i.e., whether a given\n   * segment should be either displayed or hidden by the viewer.\n   */\n  handleSegmentVisibilityChange ({ segmentUID, isVisible }: {\n    segmentUID: string\n    isVisible: boolean\n  }): void {\n    console.log(`change visibility of segment ${segmentUID}`)\n    if (isVisible) {\n      console.info(`show segment ${segmentUID}`)\n      this.volumeViewer.showSegment(segmentUID)\n      this.setState(state => {\n        const visibleSegmentUIDs = new Set(state.visibleSegmentUIDs)\n        visibleSegmentUIDs.add(segmentUID)\n        return { visibleSegmentUIDs }\n      })\n    } else {\n      console.info(`hide segment ${segmentUID}`)\n      this.volumeViewer.hideSegment(segmentUID)\n      this.setState(state => {\n        const visibleSegmentUIDs = new Set(state.visibleSegmentUIDs)\n        visibleSegmentUIDs.delete(segmentUID)\n        return { visibleSegmentUIDs }\n      })\n    }\n  }\n\n  /**\n   * Handle change of segment style.\n   */\n  handleSegmentStyleChange ({ segmentUID, styleOptions }: {\n    segmentUID: string\n    styleOptions: {\n      opacity?: number\n    }\n  }): void {\n    console.log(`change style of segment ${segmentUID}`)\n    this.volumeViewer.setSegmentStyle(segmentUID, styleOptions)\n  }\n\n  /**\n   * Handle toggling of mapping visibility, i.e., whether a given\n   * mapping should be either displayed or hidden by the viewer.\n   */\n  handleMappingVisibilityChange ({ mappingUID, isVisible }: {\n    mappingUID: string\n    isVisible: boolean\n  }): void {\n    console.log(`change visibility of mapping ${mappingUID}`)\n    if (isVisible) {\n      console.info(`show mapping ${mappingUID}`)\n      this.volumeViewer.showParameterMapping(mappingUID)\n      this.setState(state => {\n        const visibleMappingUIDs = new Set(state.visibleMappingUIDs)\n        visibleMappingUIDs.add(mappingUID)\n        return { visibleMappingUIDs }\n      })\n    } else {\n      console.info(`hide mapping ${mappingUID}`)\n      this.volumeViewer.hideParameterMapping(mappingUID)\n      this.setState(state => {\n        const visibleMappingUIDs = new Set(state.visibleMappingUIDs)\n        visibleMappingUIDs.delete(mappingUID)\n        return { visibleMappingUIDs }\n      })\n    }\n  }\n\n  /**\n   * Handle change of mapping style.\n   */\n  handleMappingStyleChange ({ mappingUID, styleOptions }: {\n    mappingUID: string\n    styleOptions: {\n      opacity?: number\n    }\n  }): void {\n    console.log(`change style of mapping ${mappingUID}`)\n    this.volumeViewer.setParameterMappingStyle(mappingUID, styleOptions)\n  }\n\n  /**\n   * Handle toggling of optical path visibility, i.e., whether a given\n   * optical path should be either displayed or hidden by the viewer.\n   */\n  handleOpticalPathVisibilityChange ({ opticalPathIdentifier, isVisible }: {\n    opticalPathIdentifier: string\n    isVisible: boolean\n  }): void {\n    console.log(`change visibility of optical path ${opticalPathIdentifier}`)\n    if (isVisible) {\n      console.info(`show optical path ${opticalPathIdentifier}`)\n      this.volumeViewer.showOpticalPath(opticalPathIdentifier)\n      this.setState(state => {\n        const visibleOpticalPathIdentifiers = new Set(\n          state.visibleOpticalPathIdentifiers\n        )\n        visibleOpticalPathIdentifiers.add(opticalPathIdentifier)\n        return { visibleOpticalPathIdentifiers }\n      })\n    } else {\n      console.info(`hide optical path ${opticalPathIdentifier}`)\n      this.volumeViewer.hideOpticalPath(opticalPathIdentifier)\n      this.setState(state => {\n        const visibleOpticalPathIdentifiers = new Set(\n          state.visibleOpticalPathIdentifiers\n        )\n        visibleOpticalPathIdentifiers.delete(opticalPathIdentifier)\n        return { visibleOpticalPathIdentifiers }\n      })\n    }\n  }\n\n  /**\n   * Handle change of optical path style.\n   */\n  handleOpticalPathStyleChange ({ opticalPathIdentifier, styleOptions }: {\n    opticalPathIdentifier: string\n    styleOptions: {\n      opacity?: number\n      color?: number[]\n      limitValues?: number[]\n    }\n  }): void {\n    console.log(`change style of optical path ${opticalPathIdentifier}`)\n    this.volumeViewer.setOpticalPathStyle(opticalPathIdentifier, styleOptions)\n  }\n\n  /**\n   * Handle toggling of optical path activity, i.e., whether a given\n   * optical path should be either added or removed from the viewport.\n   */\n  handleOpticalPathActivityChange ({ opticalPathIdentifier, isActive }: {\n    opticalPathIdentifier: string\n    isActive: boolean\n  }): void {\n    console.log(`change activity of optical path ${opticalPathIdentifier}`)\n    if (isActive) {\n      console.info(`activate optical path ${opticalPathIdentifier}`)\n      this.volumeViewer.activateOpticalPath(opticalPathIdentifier)\n      this.setState(state => {\n        const activeOpticalPathIdentifiers = new Set(\n          state.activeOpticalPathIdentifiers\n        )\n        activeOpticalPathIdentifiers.add(opticalPathIdentifier)\n        return { activeOpticalPathIdentifiers }\n      })\n    } else {\n      console.info(`deactivate optical path ${opticalPathIdentifier}`)\n      this.volumeViewer.deactivateOpticalPath(opticalPathIdentifier)\n      this.setState(state => {\n        const activeOpticalPathIdentifiers = new Set(\n          state.activeOpticalPathIdentifiers\n        )\n        activeOpticalPathIdentifiers.delete(opticalPathIdentifier)\n        return { activeOpticalPathIdentifiers }\n      })\n    }\n  }\n\n  /**\n   * Set default presentation state that is either defined by metadata included\n   * in the DICOM Slide Microscopy instance or by the viewer.\n   */\n  setDefaultPresentationState (): void {\n    const visibleOpticalPathIdentifiers: Set<string> = new Set()\n    const opticalPaths = this.volumeViewer.getAllOpticalPaths()\n    opticalPaths.sort((a, b) => {\n      if (a.identifier.localeCompare(b.identifier) === 1) {\n        return 1\n      } else if (b.identifier.localeCompare(a.identifier) === 1) {\n        return -1\n      }\n      return 0\n    })\n    opticalPaths.forEach((item: dmv.opticalPath.OpticalPath) => {\n      const identifier = item.identifier\n      const style = this.volumeViewer.getOpticalPathDefaultStyle(identifier)\n      this.volumeViewer.setOpticalPathStyle(identifier, style)\n      this.volumeViewer.hideOpticalPath(identifier)\n      this.volumeViewer.deactivateOpticalPath(identifier)\n      if (item.isMonochromatic) {\n        /*\n         * If the image metadata contains a palette color lookup table for the\n         * optical path, then it will be displayed by default.\n         */\n        if (item.paletteColorLookupTableUID != null) {\n          visibleOpticalPathIdentifiers.add(identifier)\n        }\n      } else {\n        /* Color images will always be displayed by default. */\n        visibleOpticalPathIdentifiers.add(identifier)\n      }\n    })\n\n    /*\n     * If no optical paths have been selected for visualization so far, select\n     * first n optical paths and set a default value of interest (VOI) window\n     * (using pre-computed pixel data statistics) and a default color.\n     */\n    if (visibleOpticalPathIdentifiers.size === 0) {\n      const defaultColors = [\n        [255, 255, 255]\n      ]\n      opticalPaths.forEach((item: dmv.opticalPath.OpticalPath) => {\n        const identifier = item.identifier\n        if (item.isMonochromatic) {\n          const numVisible = visibleOpticalPathIdentifiers.size\n          if (numVisible < defaultColors.length) {\n            const style = {\n              ...this.volumeViewer.getOpticalPathStyle(identifier)\n            }\n            const index = numVisible\n            style.color = defaultColors[index]\n            const stats = this.state.pixelDataStatistics[item.identifier]\n            if (stats != null) {\n              style.limitValues = [stats.min, stats.max]\n            }\n            this.volumeViewer.setOpticalPathStyle(item.identifier, style)\n            visibleOpticalPathIdentifiers.add(item.identifier)\n          }\n        }\n      })\n    }\n\n    console.info(\n      `selected n=${visibleOpticalPathIdentifiers.size} optical paths ` +\n      'for visualization'\n    )\n    visibleOpticalPathIdentifiers.forEach(identifier => {\n      this.volumeViewer.showOpticalPath(identifier)\n    })\n    this.setState(state => ({\n      activeOpticalPathIdentifiers: new Set(visibleOpticalPathIdentifiers),\n      visibleOpticalPathIdentifiers: new Set(visibleOpticalPathIdentifiers)\n    }))\n  }\n\n  /**\n   * Handler that gets called when a presentation state has been selected from\n   * the current list of available presentation states.\n   */\n  handlePresentationStateReset (): void {\n    this.setState({ selectedPresentationStateUID: undefined })\n    const urlPath = this.props.location.pathname\n    this.props.navigate(urlPath)\n    this.setDefaultPresentationState()\n  }\n\n  /**\n   * Handler that gets called when a presentation state has been selected from\n   * the current list of available presentation states.\n   */\n  handlePresentationStateSelection (\n    value?: string,\n    option?: any\n  ): void {\n    if (value != null) {\n      console.info(`select Presentation State instance \"${value}\"`)\n      let presentationState\n      this.state.presentationStates.forEach(instance => {\n        if (instance.SOPInstanceUID === value) {\n          presentationState = instance\n        }\n      })\n      if (presentationState != null) {\n        let urlPath = this.props.location.pathname\n        urlPath += `?state=${value}`\n        this.props.navigate(urlPath)\n        this.setPresentationState(presentationState)\n      } else {\n        // eslint-disable-next-line @typescript-eslint/no-floating-promises\n        NotificationMiddleware.onError(\n          NotificationMiddlewareContext.SLIM,\n          new CustomError(\n            errorTypes.VISUALIZATION,\n            'Presentation State could not be found'\n          )\n        )\n        console.log(\n          'failed to handle section of presentation state: ' +\n          `could not find instance \"${value}\"`\n        )\n      }\n    } else {\n      this.handlePresentationStateReset()\n    }\n    this.setState({ selectedPresentationStateUID: value })\n  }\n\n  /**\n   * Handler that will toggle the ROI drawing tool, i.e., either activate or\n   * de-activate it, depending on its current state.\n   */\n  handleRoiDrawing (): void {\n    if (this.state.isRoiDrawingActive) {\n      console.info('deactivate drawing of ROIs')\n      this.volumeViewer.deactivateDrawInteraction()\n      this.volumeViewer.activateSelectInteraction({})\n      this.setState({\n        isAnnotationModalVisible: false,\n        isSelectedRoiModalVisible: false,\n        isRoiTranslationActive: false,\n        isRoiDrawingActive: false,\n        isRoiModificationActive: false,\n        isGoToModalVisible: false\n      })\n    } else {\n      console.info('activate drawing of ROIs')\n      this.setState({\n        isAnnotationModalVisible: true,\n        isSelectedRoiModalVisible: false,\n        isRoiDrawingActive: true,\n        isRoiModificationActive: false,\n        isRoiTranslationActive: false,\n        isGoToModalVisible: false\n      })\n      this.volumeViewer.deactivateSelectInteraction()\n      this.volumeViewer.deactivateSnapInteraction()\n      this.volumeViewer.deactivateTranslateInteraction()\n      this.volumeViewer.deactivateModifyInteraction()\n    }\n  }\n\n  /**\n   * Handler that will toggle the ROI modification tool, i.e., either activate\n   * or de-activate it, depending on its current state.\n   */\n  handleRoiModification (): void {\n    console.info('toggle modification of ROIs')\n    if (this.volumeViewer.isModifyInteractionActive) {\n      this.volumeViewer.deactivateModifyInteraction()\n      this.volumeViewer.deactivateSnapInteraction()\n      this.volumeViewer.activateSelectInteraction({})\n      this.setState({\n        isRoiTranslationActive: false,\n        isRoiDrawingActive: false,\n        isRoiModificationActive: false\n      })\n    } else {\n      this.setState({\n        isRoiModificationActive: true,\n        isRoiDrawingActive: false,\n        isRoiTranslationActive: false\n      })\n      this.volumeViewer.deactivateDrawInteraction()\n      this.volumeViewer.deactivateTranslateInteraction()\n      this.volumeViewer.deactivateSelectInteraction()\n      this.volumeViewer.activateSnapInteraction({})\n      this.volumeViewer.activateModifyInteraction({})\n    }\n  }\n\n  /**\n   * Handler that will toggle the ROI translation tool, i.e., either activate\n   * or de-activate it, depending on its current state.\n   */\n  handleRoiTranslation (): void {\n    console.info('toggle translation of ROIs')\n    if (this.volumeViewer.isTranslateInteractionActive) {\n      this.volumeViewer.deactivateTranslateInteraction()\n      this.setState({\n        isRoiTranslationActive: false,\n        isRoiDrawingActive: false,\n        isRoiModificationActive: false\n      })\n    } else {\n      this.setState({\n        isRoiTranslationActive: true,\n        isRoiDrawingActive: false,\n        isRoiModificationActive: false\n      })\n      this.volumeViewer.deactivateModifyInteraction()\n      this.volumeViewer.deactivateSnapInteraction()\n      this.volumeViewer.deactivateDrawInteraction()\n      this.volumeViewer.deactivateSelectInteraction()\n      this.volumeViewer.activateTranslateInteraction({})\n    }\n  }\n\n  handleGoTo (): void {\n    this.volumeViewer.deactivateDrawInteraction()\n    this.volumeViewer.deactivateModifyInteraction()\n    this.volumeViewer.deactivateSnapInteraction()\n    this.volumeViewer.deactivateTranslateInteraction()\n    this.volumeViewer.deactivateSelectInteraction()\n    this.setState({\n      isGoToModalVisible: true,\n      isAnnotationModalVisible: false,\n      isSelectedRoiModalVisible: false,\n      isReportModalVisible: false,\n      isRoiTranslationActive: false,\n      isRoiModificationActive: false,\n      isRoiDrawingActive: false\n    })\n  }\n\n  /**\n   * Handler that will toggle the ROI removal tool, i.e., either activate\n   * or de-activate it, depending on its current state.\n   */\n  handleRoiRemoval (): void {\n    this.volumeViewer.deactivateDrawInteraction()\n    this.volumeViewer.deactivateSnapInteraction()\n    this.volumeViewer.deactivateTranslateInteraction()\n    this.volumeViewer.deactivateModifyInteraction()\n    if (this.state.selectedRoiUIDs.size > 0) {\n      this.state.selectedRoiUIDs.forEach(uid => {\n        if (uid === undefined) {\n          // eslint-disable-next-line @typescript-eslint/no-floating-promises\n          message.warning('No annotation was selected for removal')\n          return\n        }\n        console.info(`remove ROI \"${uid}\"`)\n        this.volumeViewer.removeROI(uid)\n        // eslint-disable-next-line @typescript-eslint/no-floating-promises\n        message.info('Annotation was removed')\n      })\n      this.setState({\n        selectedRoiUIDs: new Set(),\n        isRoiTranslationActive: false,\n        isRoiDrawingActive: false,\n        isRoiModificationActive: false\n      })\n    } else {\n      this.state.visibleRoiUIDs.forEach(uid => {\n        console.info(`remove ROI \"${uid}\"`)\n        this.volumeViewer.removeROI(uid)\n      })\n      this.setState({\n        visibleRoiUIDs: new Set(),\n        isRoiTranslationActive: false,\n        isRoiDrawingActive: false,\n        isRoiModificationActive: false\n      })\n    }\n    this.volumeViewer.activateSelectInteraction({})\n  }\n\n  /**\n   * Handler that will toggle the ROI visibility tool, i.e., either activate\n   * or de-activate it, depending on its current state.\n   */\n  handleRoiVisibilityChange (): void {\n    console.info('toggle visibility of ROIs')\n    if (this.volumeViewer.areROIsVisible) {\n      this.volumeViewer.deactivateDrawInteraction()\n      this.volumeViewer.deactivateSnapInteraction()\n      this.volumeViewer.deactivateTranslateInteraction()\n      this.volumeViewer.deactivateSelectInteraction()\n      this.volumeViewer.deactivateModifyInteraction()\n      this.volumeViewer.hideROIs()\n      this.setState({\n        areRoisHidden: true,\n        isRoiDrawingActive: false,\n        isRoiModificationActive: false,\n        isRoiTranslationActive: false\n      })\n    } else {\n      this.volumeViewer.showROIs()\n      this.volumeViewer.activateSelectInteraction({})\n      this.state.selectedRoiUIDs.forEach(uid => {\n        if (uid !== undefined) {\n          this.volumeViewer.setROIStyle(uid, this.selectedRoiStyle)\n        }\n      })\n      this.setState({ areRoisHidden: false })\n    }\n  }\n\n  render (): React.ReactNode {\n    const rois: dmv.roi.ROI[] = []\n    const segments: dmv.segment.Segment[] = []\n    const mappings: dmv.mapping.ParameterMapping[] = []\n    const annotationGroups: dmv.annotation.AnnotationGroup[] = []\n    rois.push(...this.volumeViewer.getAllROIs())\n    segments.push(...this.volumeViewer.getAllSegments())\n    mappings.push(...this.volumeViewer.getAllParameterMappings())\n    const allAnnotationGroups = this.volumeViewer.getAllAnnotationGroups()\n    const filteredAnnotationGroups = allAnnotationGroups?.filter((annotationGroup) =>\n      annotationGroup.referencedSeriesInstanceUID === this.props.seriesInstanceUID\n    )\n    annotationGroups.push(...filteredAnnotationGroups)\n\n    const annotations = rois.map(roi => adaptRoiToAnnotation(roi))\n\n    const openSubMenuItems = [\n      'specimens', 'optical-paths', 'annotations', 'presentation-states'\n    ]\n\n    let report: React.ReactNode\n    const dataset = this.state.generatedReport\n    if (dataset !== undefined) {\n      report = <Report dataset={dataset} />\n    }\n\n    let annotationMenuItems: React.ReactNode\n    if (rois.length > 0) {\n      annotationMenuItems = (\n        <AnnotationList\n          rois={rois}\n          selectedRoiUIDs={this.state.selectedRoiUIDs}\n          visibleRoiUIDs={this.state.visibleRoiUIDs}\n          onSelection={this.handleAnnotationSelection}\n          onVisibilityChange={this.handleAnnotationVisibilityChange}\n        />\n      )\n    }\n\n    const findingOptions = this.findingOptions.map(finding => {\n      return (\n        <Select.Option\n          key={finding.CodeValue}\n          value={finding.CodeValue}\n        >\n          {finding.CodeMeaning}\n        </Select.Option>\n      )\n    })\n\n    const geometryTypeOptionsMapping: { [key: string]: React.ReactNode } = {\n      point: <Select.Option key='point' value='point'>Point</Select.Option>,\n      circle: <Select.Option key='circle' value='circle'>Circle</Select.Option>,\n      box: <Select.Option key='box' value='box'>Box</Select.Option>,\n      polygon: <Select.Option key='polygon' value='polygon'>Polygon</Select.Option>,\n      line: <Select.Option key='line' value='line'>Line</Select.Option>,\n      freehandpolygon: (\n        <Select.Option key='freehandpolygon' value='freehandpolygon'>\n          Polygon (freehand)\n        </Select.Option>\n      ),\n      freehandline: (\n        <Select.Option key='freehandline' value='freehandline'>\n          Line (freehand)\n        </Select.Option>\n      )\n    }\n\n    const annotationConfigurations: React.ReactNode[] = [\n      (\n        <Select\n          style={{ minWidth: 130 }}\n          onSelect={this.handleAnnotationFindingSelection}\n          key='annotation-finding'\n          defaultActiveFirstOption\n        >\n          {findingOptions}\n        </Select>\n      )\n    ]\n\n    const selectedFinding = this.state.selectedFinding\n    if (selectedFinding !== undefined) {\n      const key = _buildKey(selectedFinding)\n      this.evaluationOptions[key].forEach(evaluation => {\n        const evaluationOptions = evaluation.values.map(code => {\n          return (\n            <Select.Option\n              key={code.CodeValue}\n              value={code.CodeValue}\n              label={evaluation.name}\n            >\n              {code.CodeMeaning}\n            </Select.Option>\n          )\n        })\n        annotationConfigurations.push(\n          <>\n            {evaluation.name.CodeMeaning}\n            <Select\n              style={{ minWidth: 130 }}\n              onSelect={this.handleAnnotationEvaluationSelection}\n              allowClear\n              onClear={this.handleAnnotationEvaluationClearance}\n              defaultActiveFirstOption={false}\n            >\n              {evaluationOptions}\n            </Select>\n          </>\n        )\n      })\n      const geometryTypeOptions = this.geometryTypeOptions[key].map(name => {\n        return geometryTypeOptionsMapping[name]\n      })\n      annotationConfigurations.push(\n        <>\n          ROI geometry type\n          <Select\n            style={{ minWidth: 130 }}\n            onSelect={this.handleAnnotationGeometryTypeSelection}\n            key='annotation-geometry-type'\n          >\n            {geometryTypeOptions}\n          </Select>\n        </>\n      )\n      annotationConfigurations.push(\n        <Checkbox\n          onChange={this.handleAnnotationMeasurementActivation}\n          key='annotation-measurement'\n        >\n          measure\n        </Checkbox>\n      )\n    }\n\n    const specimenMenu = (\n      <Menu.SubMenu key='specimens' title='Specimens'>\n        <SpecimenList\n          metadata={this.props.slide.volumeImages[0]}\n          showstain={false}\n        />\n      </Menu.SubMenu>\n    )\n\n    const equipmentMenu = (\n      <Menu.SubMenu key='equipment' title='Equipment'>\n        <Equipment metadata={this.props.slide.volumeImages[0]} />\n      </Menu.SubMenu>\n    )\n\n    const opticalPaths = this.volumeViewer.getAllOpticalPaths()\n    opticalPaths.sort((a, b) => {\n      if (a.identifier.localeCompare(b.identifier) === 1) {\n        return 1\n      } else if (b.identifier.localeCompare(a.identifier) === 1) {\n        return -1\n      }\n      return 0\n    })\n    const opticalPathStyles: {\n      [identifier: string]: {\n        opacity: number\n        color?: number[]\n        limitValues?: number[]\n        paletteColorLookupTable?: dmv.color.PaletteColorLookupTable\n      }\n    } = {}\n    const opticalPathMetadata: {\n      [identifier: string]: dmv.metadata.VLWholeSlideMicroscopyImage[]\n    } = {}\n    opticalPaths.forEach(opticalPath => {\n      const identifier = opticalPath.identifier\n      const metadata = this.volumeViewer.getOpticalPathMetadata(identifier)\n      opticalPathMetadata[identifier] = metadata\n      const style = {\n        ...this.volumeViewer.getOpticalPathStyle(identifier)\n      }\n      opticalPathStyles[identifier] = style\n    })\n    const opticalPathMenu = (\n      <Menu.SubMenu key='optical-paths' title='Optical Paths'>\n        <OpticalPathList\n          metadata={opticalPathMetadata}\n          opticalPaths={opticalPaths}\n          defaultOpticalPathStyles={opticalPathStyles}\n          visibleOpticalPathIdentifiers={this.state.visibleOpticalPathIdentifiers}\n          activeOpticalPathIdentifiers={this.state.activeOpticalPathIdentifiers}\n          onOpticalPathVisibilityChange={this.handleOpticalPathVisibilityChange}\n          onOpticalPathStyleChange={this.handleOpticalPathStyleChange}\n          onOpticalPathActivityChange={this.handleOpticalPathActivityChange}\n          selectedPresentationStateUID={this.state.selectedPresentationStateUID}\n        />\n      </Menu.SubMenu>\n    )\n\n    let presentationStateMenu\n    if (this.state.presentationStates.length > 0) {\n      const presentationStateOptions = []\n      this.state.presentationStates.forEach(instance => {\n        presentationStateOptions.push(\n          <Select.Option\n            key={instance.SOPInstanceUID}\n            value={instance.SOPInstanceUID}\n            dropdownMatchSelectWidth={false}\n            size='small'\n          >\n            {instance.ContentDescription}\n          </Select.Option>\n        )\n      })\n      presentationStateOptions.push(\n        <Select.Option\n          key='default-presentation-state'\n          value={undefined}\n          dropdownMatchSelectWidth={false}\n          size='small'\n        >\n          <></>\n        </Select.Option>\n      )\n      presentationStateMenu = (\n        <Menu.SubMenu key='presentation-states' title='Presentation States'>\n          <Space align='center' size={20} style={{ padding: '14px' }}>\n            <Select\n              style={{ minWidth: 200, maxWidth: 200 }}\n              onSelect={this.handlePresentationStateSelection}\n              key='presentation-states'\n              value={this.state.selectedPresentationStateUID}\n            >\n              {presentationStateOptions}\n            </Select>\n            <Tooltip title='Reset'>\n              <Btn\n                icon={<UndoOutlined />}\n                type='primary'\n                onClick={this.handlePresentationStateReset}\n              />\n            </Tooltip>\n          </Space>\n        </Menu.SubMenu>\n      )\n    }\n\n    let segmentationMenu\n    if (segments.length > 0) {\n      const defaultSegmentStyles: {\n        [segmentUID: string]: {\n          opacity: number\n        }\n      } = {}\n      const segmentMetadata: {\n        [segmentUID: string]: dmv.metadata.Segmentation[]\n      } = {}\n      const segments = this.volumeViewer.getAllSegments()\n      segments.forEach(segment => {\n        defaultSegmentStyles[segment.uid] = this.volumeViewer.getSegmentStyle(\n          segment.uid\n        )\n        segmentMetadata[segment.uid] = this.volumeViewer.getSegmentMetadata(\n          segment.uid\n        )\n      })\n      segmentationMenu = (\n        <Menu.SubMenu key='segmentations' title='Segmentations'>\n          <SegmentList\n            segments={segments}\n            metadata={segmentMetadata}\n            defaultSegmentStyles={defaultSegmentStyles}\n            visibleSegmentUIDs={this.state.visibleSegmentUIDs}\n            onSegmentVisibilityChange={this.handleSegmentVisibilityChange}\n            onSegmentStyleChange={this.handleSegmentStyleChange}\n          />\n        </Menu.SubMenu>\n      )\n      openSubMenuItems.push('segmentations')\n    }\n\n    let parametricMapMenu\n    if (mappings.length > 0) {\n      const defaultMappingStyles: {\n        [mappingUID: string]: {\n          opacity: number\n        }\n      } = {}\n      const mappingMetadata: {\n        [mappingUID: string]: dmv.metadata.ParametricMap[]\n      } = {}\n      mappings.forEach(mapping => {\n        defaultMappingStyles[mapping.uid] = this.volumeViewer.getParameterMappingStyle(\n          mapping.uid\n        )\n        mappingMetadata[mapping.uid] = this.volumeViewer.getParameterMappingMetadata(\n          mapping.uid\n        )\n      })\n      parametricMapMenu = (\n        <Menu.SubMenu key='parmetric-maps' title='Parametric Maps'>\n          <MappingList\n            mappings={mappings}\n            metadata={mappingMetadata}\n            defaultMappingStyles={defaultMappingStyles}\n            visibleMappingUIDs={this.state.visibleMappingUIDs}\n            onMappingVisibilityChange={this.handleMappingVisibilityChange}\n            onMappingStyleChange={this.handleMappingStyleChange}\n          />\n        </Menu.SubMenu>\n      )\n      openSubMenuItems.push('parametric-maps')\n    }\n\n    let annotationGroupMenu\n\n    if (annotations.length > 0) {\n      annotations.forEach((annotation) => {\n        const roi = this.volumeViewer.getROI(annotation.uid)\n        const key = _getRoiKey(roi) as string\n        const color = this.roiStyles[key] !== undefined\n          ? this.roiStyles[key].stroke?.color.slice(0, 3)\n          : DEFAULT_ANNOTATION_COLOR_PALETTE[\n            Object.keys(this.roiStyles).length % DEFAULT_ANNOTATION_COLOR_PALETTE.length\n          ]\n        this.defaultAnnotationStyles[annotation.uid] = {\n          color,\n          opacity: DEFAULT_ANNOTATION_OPACITY\n        } as any\n\n        this.roiStyles[key] = this.generateRoiStyle(\n          this.defaultAnnotationStyles[annotation.uid]\n        )\n      })\n    }\n\n    if (annotationGroups.length > 0) {\n      const annotationGroupMetadata: {\n        [annotationGroupUID: string]: dmv.metadata.MicroscopyBulkSimpleAnnotations\n      } = {}\n      const defaultAnnotationGroupStyles: {\n        [annotationUID: string]: {\n          opacity: number\n          color: number[]\n        }\n      } = {}\n      annotationGroups.forEach(annotationGroup => {\n        defaultAnnotationGroupStyles[annotationGroup.uid] = this.volumeViewer.getAnnotationGroupStyle(\n          annotationGroup.uid\n        )\n        annotationGroupMetadata[annotationGroup.uid] = this.volumeViewer.getAnnotationGroupMetadata(\n          annotationGroup.uid\n        )\n      })\n      annotationGroupMenu = (\n        <Menu.SubMenu key='annotation-groups' title='Annotation Groups'>\n          <AnnotationGroupList\n            annotationGroups={annotationGroups}\n            metadata={annotationGroupMetadata}\n            // when adding annotationGroups to annotationCategory list,\n            // make so that this is uses this.defaultAnnotationStyles later instead of defaultAnnotationGroupStyles\n            defaultAnnotationGroupStyles={defaultAnnotationGroupStyles}\n            visibleAnnotationGroupUIDs={this.state.visibleAnnotationGroupUIDs}\n            onAnnotationGroupVisibilityChange={this.handleAnnotationGroupVisibilityChange}\n            onAnnotationGroupStyleChange={this.handleAnnotationGroupStyleChange}\n          />\n        </Menu.SubMenu>\n      )\n      openSubMenuItems.push('annotationGroups')\n    }\n\n    let toolbar\n    let toolbarHeight = '0px'\n    const annotationTools = [\n      <Button\n        tooltip='Draw ROI [Alt+D]'\n        icon={FaDrawPolygon}\n        onClick={this.handleRoiDrawing}\n        isSelected={this.state.isRoiDrawingActive}\n        key='draw-roi-button'\n      />,\n      <Button\n        tooltip='Modify ROIs [Alt+M]'\n        icon={FaHandPointer}\n        onClick={this.handleRoiModification}\n        isSelected={this.state.isRoiModificationActive}\n        key='modify-roi-button'\n      />,\n      <Button\n        tooltip='Translate ROIs [Alt+T]'\n        icon={FaHandPaper}\n        onClick={this.handleRoiTranslation}\n        isSelected={this.state.isRoiTranslationActive}\n        key='translate-roi-button'\n      />,\n      <Button\n        tooltip='Remove selected ROI [Alt+R]'\n        onClick={this.handleRoiRemoval}\n        icon={FaTrash}\n        key='remove-roi-button'\n      />,\n      <Button\n        tooltip='Show/Hide ROIs [Alt+V]'\n        icon={this.state.areRoisHidden ? FaEye : FaEyeSlash}\n        onClick={this.handleRoiVisibilityChange}\n        isSelected={this.state.areRoisHidden}\n        key='toggle-roi-visibility-button'\n      />,\n      <Button\n        tooltip='Save ROIs [Alt+S]'\n        icon={FaSave}\n        onClick={this.handleReportGeneration}\n        key='generate-report-button'\n      />\n    ]\n    const controlTools = [\n      <Button\n        tooltip='Go to [Alt+G]'\n        icon={FaCrosshairs}\n        onClick={this.handleGoTo}\n        key='go-to-slide-position-button'\n      />\n    ]\n    if (this.props.enableAnnotationTools) {\n      toolbar = (\n        <Row justify='start'>\n          {annotationTools.map((item, i) => {\n            return <React.Fragment key={i}>{item}</React.Fragment>\n          })}\n          {controlTools.map((item, i) => {\n            return <React.Fragment key={i}>{item}</React.Fragment>\n          })}\n        </Row>\n      )\n      toolbarHeight = '50px'\n    }\n\n    let cursor = 'default'\n    if (this.state.isLoading) {\n      cursor = 'progress'\n    }\n\n    let selectedRoiInformation\n    if (this.state.selectedRoi != null) {\n      const roiAttributes: Array<{\n        name: string\n        value: string\n        unit?: string\n      }> = [\n        {\n          name: 'UID',\n          value: this.state.selectedRoi.uid\n        }\n      ]\n      const roiScoordAttributes: Array<{\n        name: string\n        value: string\n      }> = [\n        {\n          name: 'Graphic type',\n          value: this.state.selectedRoi.scoord3d.graphicType\n        }\n      ]\n      const roiEvaluationAttributes: Array<{\n        name: string\n        value: string\n      }> = []\n      this.state.selectedRoi.evaluations.forEach(item => {\n        if (item.ValueType === 'CODE') {\n          const codeItem = item as dcmjs.sr.valueTypes.CodeContentItem\n          roiEvaluationAttributes.push({\n            name: codeItem.ConceptNameCodeSequence[0].CodeMeaning,\n            value: codeItem.ConceptCodeSequence[0].CodeMeaning\n          })\n        } else {\n          const textItem = item as dcmjs.sr.valueTypes.TextContentItem\n          roiEvaluationAttributes.push({\n            name: textItem.ConceptNameCodeSequence[0].CodeMeaning,\n            value: textItem.TextValue\n          })\n        }\n      })\n      const roiMeasurmentAttributesPerOpticalPath: {\n        [identifier: string]: Array<{\n          name: string\n          value: string\n          unit?: string\n        }>\n      } = {}\n      this.state.selectedRoi.measurements.forEach(item => {\n        let identifier = 'default'\n        if (item.ContentSequence != null) {\n          const refItems = findContentItemsByName({\n            content: item.ContentSequence,\n            name: new dcmjs.sr.coding.CodedConcept({\n              value: '121112',\n              meaning: 'Source of Measurement',\n              schemeDesignator: 'DCM'\n            })\n          })\n          if (refItems.length > 0) {\n            identifier = (\n              refItems[0]\n                // @ts-expect-error\n                .ReferencedSOPSequence[0]\n                .ReferencedOpticalPathIdentifier\n            )\n          }\n        }\n        if (!(identifier in roiMeasurmentAttributesPerOpticalPath)) {\n          roiMeasurmentAttributesPerOpticalPath[identifier] = []\n        }\n        const measuredValueItem = item.MeasuredValueSequence[0]\n        roiMeasurmentAttributesPerOpticalPath[identifier].push({\n          name: item.ConceptNameCodeSequence[0].CodeMeaning,\n          value: measuredValueItem.NumericValue.toString(),\n          unit: measuredValueItem.MeasurementUnitsCodeSequence[0].CodeMeaning\n        })\n      })\n      const createRoiDescription = (\n        attributes: Array<{ name: string, value: string, unit?: string }>\n      ): React.ReactNode[] => {\n        return attributes.map(item => {\n          let value\n          if (item.unit != null) {\n            value = `${item.value} [${item.unit}]`\n          } else {\n            value = item.value\n          }\n          return (\n            <Descriptions.Item\n              key={item.name}\n              label={item.name}\n            >\n              {value}\n            </Descriptions.Item>\n          )\n        })\n      }\n      const roiDescriptions = createRoiDescription(roiAttributes)\n      const roiScoordDescriptions = createRoiDescription(\n        roiScoordAttributes\n      )\n      const roiEvaluationDescriptions = createRoiDescription(\n        roiEvaluationAttributes\n      )\n      const roiMeasurementDescriptions = []\n      for (const identifier in roiMeasurmentAttributesPerOpticalPath) {\n        const descriptions = createRoiDescription(\n          roiMeasurmentAttributesPerOpticalPath[identifier]\n        )\n        if (identifier === 'default') {\n          roiMeasurementDescriptions.push(descriptions)\n        } else {\n          roiMeasurementDescriptions.push(\n            <>\n              <Divider orientation='left' orientationMargin={0} dashed plain>\n                {identifier}\n              </Divider>\n              {descriptions}\n            </>\n          )\n        }\n      }\n      selectedRoiInformation = (\n        <>\n          <Descriptions layout='horizontal' column={1}>\n            {roiDescriptions}\n          </Descriptions>\n          <Divider orientation='left' orientationMargin={0}>\n            Spatial coordinates\n          </Divider>\n          <Descriptions layout='horizontal' column={1}>\n            {roiScoordDescriptions}\n          </Descriptions>\n          <Divider orientation='left' orientationMargin={0}>\n            Evaluations\n          </Divider>\n          <Descriptions layout='horizontal' column={1}>\n            {roiEvaluationDescriptions}\n          </Descriptions>\n          <Divider orientation='left' orientationMargin={0}>\n            Measurements\n          </Divider>\n          <Descriptions layout='horizontal' column={1}>\n            {roiMeasurementDescriptions}\n          </Descriptions>\n        </>\n      )\n    }\n\n    return (\n      <Layout style={{ height: '100%' }} hasSider>\n        <Layout.Content style={{ height: '100%' }}>\n          {toolbar}\n\n          <div\n            style={{\n              height: `calc(100% - ${toolbarHeight})`,\n              overflow: 'hidden',\n              cursor: cursor\n            }}\n            ref={this.volumeViewportRef}\n          />\n\n          <Modal\n            open={this.state.isAnnotationModalVisible}\n            title='Configure annotations'\n            onOk={this.handleAnnotationConfigurationCompletion}\n            onCancel={this.handleAnnotationConfigurationCancellation}\n            okText='Select'\n          >\n            <Space align='start' direction='vertical'>\n              {annotationConfigurations}\n            </Space>\n          </Modal>\n\n          <Modal\n            open={this.state.isSelectedRoiModalVisible}\n            title='Selected ROI'\n            onCancel={this.handleRoiSelectionCancellation}\n            maskClosable\n            footer={null}\n          >\n            <Space align='start' direction='vertical'>\n              {selectedRoiInformation}\n            </Space>\n          </Modal>\n\n          <Modal\n            open={this.state.isGoToModalVisible}\n            title='Go to slide position'\n            onOk={this.handleSlidePositionSelection}\n            onCancel={this.handleSlidePositionSelectionCancellation}\n            okText='Select'\n          >\n            <Space align='start' direction='vertical'>\n              <InputNumber\n                placeholder={\n                  '[' +\n                  `${this.state.validXCoordinateRange[0]}` +\n                  ', ' +\n                  `${this.state.validXCoordinateRange[1]}` +\n                  ']'\n                }\n                prefix='X Coordinate [mm]'\n                onChange={this.handleXCoordinateSelection}\n                onPressEnter={this.handleXCoordinateSelection}\n                controls={false}\n                addonAfter={\n                  this.state.isSelectedXCoordinateValid\n                    ? (\n                      <CheckOutlined style={{ color: 'rgba(0,0,0,.45)' }} />\n                      )\n                    : (\n                      <StopOutlined style={{ color: 'rgba(0,0,0,.45)' }} />\n                      )\n                }\n              />\n              <InputNumber\n                placeholder={\n                  '[' +\n                  `${this.state.validYCoordinateRange[0]}` +\n                  ', ' +\n                  `${this.state.validYCoordinateRange[1]}` +\n                  ']'\n                }\n                prefix='Y Coordinate [mm]'\n                onChange={this.handleYCoordinateSelection}\n                onPressEnter={this.handleYCoordinateSelection}\n                controls={false}\n                addonAfter={\n                  this.state.isSelectedYCoordinateValid\n                    ? (\n                      <CheckOutlined style={{ color: 'rgba(0,0,0,.45)' }} />\n                      )\n                    : (\n                      <StopOutlined style={{ color: 'rgba(0,0,0,.45)' }} />\n                      )\n                }\n              />\n              <InputNumber\n                placeholder='[0 - 40]'\n                prefix='Magnification'\n                onChange={this.handleMagnificationSelection}\n                onPressEnter={this.handleMagnificationSelection}\n                controls={false}\n                addonAfter={\n                  this.state.isSelectedMagnificationValid\n                    ? (\n                      <CheckOutlined style={{ color: 'rgba(0,0,0,.45)' }} />\n                      )\n                    : (\n                      <StopOutlined style={{ color: 'rgba(0,0,0,.45)' }} />\n                      )\n                }\n              />\n            </Space>\n          </Modal>\n\n          <Modal\n            open={this.state.isReportModalVisible}\n            title='Verify and save report'\n            onOk={this.handleReportVerification}\n            onCancel={this.handleReportCancellation}\n            okText='Save'\n          >\n            {report}\n          </Modal>\n        </Layout.Content>\n\n        <Layout.Sider\n          width={300}\n          reverseArrow\n          style={{\n            borderLeft: 'solid',\n            borderLeftWidth: 0.25,\n            overflow: 'hidden',\n            background: 'none'\n          }}\n        >\n          <Menu\n            mode='inline'\n            defaultOpenKeys={openSubMenuItems}\n            style={{ height: '100%' }}\n            inlineIndent={14}\n            forceSubMenuRender\n            onOpenChange={() => {\n              // Give menu item time to render before updating viewer size\n              setTimeout(() => {\n                if (this.labelViewer != null) {\n                  this.labelViewer.resize()\n                }\n              }, 100)\n            }}\n          >\n            {this.labelViewportRef.current != null && (\n              <Menu.SubMenu key='label' title='Slide label'>\n                <Menu.Item style={{ height: '100%' }} key='image'>\n                  <div\n                    style={{ height: '220px' }}\n                    ref={this.labelViewportRef}\n                  />\n                </Menu.Item>\n              </Menu.SubMenu>\n            )}\n            {specimenMenu}\n            {equipmentMenu}\n            {opticalPathMenu}\n            {presentationStateMenu}\n            <Menu.SubMenu key='annotations' title='Annotations'>\n              {annotationMenuItems}\n            </Menu.SubMenu>\n            {annotationGroupMenu}\n            {annotations.length === 0\n              ? (\n                <></>\n                )\n              : (\n                <Menu.SubMenu\n                  key='annotation-category'\n                  title='Annotation Categories'\n                >\n                  <AnnotationCategoryList\n                    annotations={annotations}\n                    onChange={this.handleAnnotationVisibilityChange}\n                    checkedAnnotationUids={this.state.visibleRoiUIDs}\n                    onStyleChange={this.handleRoiStyleChange}\n                    defaultAnnotationStyles={this.defaultAnnotationStyles}\n                  />\n                </Menu.SubMenu>\n                )}\n            {segmentationMenu}\n            {parametricMapMenu}\n          </Menu>\n        </Layout.Sider>\n        {this.state.isHoveredRoiTooltipVisible &&\n        this.state.hoveredRoiAttributes.length > 0\n          ? (\n            <HoveredRoiTooltip\n              xPosition={this.state.hoveredRoiTooltipX}\n              yPosition={this.state.hoveredRoiTooltipY}\n              attributes={this.state.hoveredRoiAttributes}\n            />\n            )\n          : (\n            <></>\n            )}\n      </Layout>\n    )\n  }\n}\n\nexport default withRouter(SlideViewer)\n","import * as dmv from 'dicom-microscopy-viewer'\nimport { CustomError, errorTypes } from '../utils/CustomError'\nimport NotificationMiddleware, {\n  NotificationMiddlewareContext\n} from '../services/NotificationMiddleware'\n\nenum ImageFlavors {\n  VOLUME = 'VOLUME',\n  LABEL = 'LABEL',\n  OVERVIEW = 'OVERVIEW',\n  THUMBNAIL = 'THUMBNAIL'\n}\n\nconst hasImageFlavor = (\n  image: dmv.metadata.VLWholeSlideMicroscopyImage,\n  imageFlavor: ImageFlavors\n): boolean => {\n  return image.ImageType[2] === imageFlavor\n}\n\nconst areSameAcquisition = (\n  image: dmv.metadata.VLWholeSlideMicroscopyImage,\n  refImage: dmv.metadata.VLWholeSlideMicroscopyImage\n): boolean => {\n  if (image.AcquisitionUID != null) {\n    return image.AcquisitionUID === refImage.AcquisitionUID\n  }\n  return false\n}\n\ninterface SlideImageCollection {\n  acquisitionUID?: string\n  frameOfReferenceUID: string\n  containerIdentifier: string\n  volumeImages: dmv.metadata.VLWholeSlideMicroscopyImage[]\n  labelImages: dmv.metadata.VLWholeSlideMicroscopyImage[]\n  overviewImages: dmv.metadata.VLWholeSlideMicroscopyImage[]\n}\n\ninterface SlideOptions {\n  images: dmv.metadata.VLWholeSlideMicroscopyImage[]\n  description?: string\n}\n\n/**\n * Slide - collection of images with the same Frame of Reference UID and\n * Container Identifier.\n */\nclass Slide {\n  readonly description: string\n  readonly acquisitionUID: string | null | undefined\n  readonly frameOfReferenceUID: string\n  readonly containerIdentifier: string\n  readonly seriesInstanceUIDs: string[]\n  readonly opticalPathIdentifiers: string[]\n  readonly pyramidUIDs: string[] = []\n  readonly areVolumeImagesMonochrome: boolean\n  readonly volumeImages: dmv.metadata.VLWholeSlideMicroscopyImage[]\n  readonly labelImages: dmv.metadata.VLWholeSlideMicroscopyImage[]\n  readonly overviewImages: dmv.metadata.VLWholeSlideMicroscopyImage[]\n\n  /**\n   * @param options\n   * @param options.images - Metadata of images associated with the slide\n   * @param options.description - Description of the slide\n   */\n  constructor (\n    options: SlideOptions\n  ) {\n    if (options.images.length === 0) {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.ENCODINGANDDECODING,\n          'Value of option \"images\" have been non-zero length.'\n        )\n      )\n    }\n\n    const seriesInstanceUIDs = new Set([] as string[])\n    const acquisitionUIDs = new Set([] as string[])\n    const opticalPathIdentifiers = new Set([] as string[])\n    const containerIdentifiers = new Set([] as string[])\n    const frameOfReferenceUIDs = {\n      VOLUME: new Set([] as string[]),\n      LABEL: new Set([] as string[]),\n      OVERVIEW: new Set([] as string[])\n    }\n    const pyramidUIDs: {\n      [key: string]: { [opticalPathIdentifier: string]: Set<string> }\n    } = {\n      VOLUME: {}\n    }\n    const volumeImages: dmv.metadata.VLWholeSlideMicroscopyImage[] = []\n    const labelImages: dmv.metadata.VLWholeSlideMicroscopyImage[] = []\n    const overviewImages: dmv.metadata.VLWholeSlideMicroscopyImage[] = []\n    options.images.forEach((image) => {\n      containerIdentifiers.add(image.ContainerIdentifier)\n      seriesInstanceUIDs.add(image.SeriesInstanceUID)\n      image.OpticalPathSequence.forEach(item => {\n        opticalPathIdentifiers.add(item.OpticalPathIdentifier)\n      })\n      if (image.AcquisitionUID != null) {\n        acquisitionUIDs.add(image.AcquisitionUID)\n      }\n      if (\n        hasImageFlavor(image, ImageFlavors.VOLUME) ||\n        hasImageFlavor(image, ImageFlavors.THUMBNAIL)\n      ) {\n        frameOfReferenceUIDs.VOLUME.add(image.FrameOfReferenceUID)\n        if (image.PyramidUID != null) {\n          for (const identifier in opticalPathIdentifiers) {\n            pyramidUIDs.VOLUME[identifier].add(image.PyramidUID)\n          }\n        }\n        volumeImages.push(image)\n      } else if (hasImageFlavor(image, ImageFlavors.LABEL)) {\n        frameOfReferenceUIDs.LABEL.add(image.FrameOfReferenceUID)\n        labelImages.push(image)\n      } else if (hasImageFlavor(image, ImageFlavors.OVERVIEW)) {\n        frameOfReferenceUIDs.OVERVIEW.add(image.FrameOfReferenceUID)\n        overviewImages.push(image)\n      }\n    })\n    if (volumeImages.length === 0) {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.ENCODINGANDDECODING,\n          'At least one VOLUME image must be provided for a slide.'\n        )\n      )\n    } else {\n      if (acquisitionUIDs.size > 1) {\n        NotificationMiddleware.onError(\n          NotificationMiddlewareContext.SLIM,\n          new CustomError(\n            errorTypes.ENCODINGANDDECODING,\n            'All VOLUME images of a slide must have the same number of ' +\n            'Samples per Pixel.'\n          )\n        )\n      }\n      const samplesPerPixel = new Set([] as number[])\n      volumeImages.forEach((image) => {\n        samplesPerPixel.add(image.SamplesPerPixel)\n      })\n      if (samplesPerPixel.size > 1) {\n        NotificationMiddleware.onError(\n          NotificationMiddlewareContext.SLIM,\n          new CustomError(\n            errorTypes.ENCODINGANDDECODING,\n            'All VOLUME images of a slide must have the same number of ' +\n            'Samples per Pixel.'\n          )\n        )\n      }\n      const isNotResampled = volumeImages.filter(image => {\n        return image.ImageType[3] !== 'RESAMPLED'\n      })\n      if (isNotResampled.length > opticalPathIdentifiers.size) {\n        console.warn(\n          'the set of VOLUME images of a slide must contain only a single ' +\n            'image that has not been resampled per optical path'\n        )\n      }\n    }\n    this.volumeImages = volumeImages\n    this.labelImages = labelImages\n    this.overviewImages = overviewImages\n\n    this.seriesInstanceUIDs = [...seriesInstanceUIDs]\n    this.opticalPathIdentifiers = [...opticalPathIdentifiers]\n\n    if (containerIdentifiers.size !== 1) {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.ENCODINGANDDECODING,\n          'All images of a slide must have the same Container Identifier.'\n        )\n      )\n    }\n    this.containerIdentifier = [...containerIdentifiers][0]\n\n    if (frameOfReferenceUIDs.VOLUME.size !== 1) {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.ENCODINGANDDECODING,\n          'All VOLUME images of a slide must have ' +\n          'the same Frame of Reference UID.'\n        )\n      )\n    }\n    this.frameOfReferenceUID = [...frameOfReferenceUIDs.VOLUME][0]\n\n    let requirePyramidUID = false\n    if (Object.keys(pyramidUIDs.VOLUME).length > 0) {\n      requirePyramidUID = true\n    }\n    this.opticalPathIdentifiers.forEach(identifier => {\n      if (pyramidUIDs.VOLUME[identifier] != null) {\n        if (pyramidUIDs.VOLUME[identifier].size > 1) {\n          NotificationMiddleware.onError(\n            NotificationMiddlewareContext.SLIM,\n            new CustomError(\n              errorTypes.ENCODINGANDDECODING,\n              `All VOLUME images for optical path \"${identifier}\"` +\n              'must be part of the same multi-resolution pyramid.'\n            )\n          )\n        } else if (pyramidUIDs.VOLUME[identifier].size === 1) {\n          this.pyramidUIDs.push([...pyramidUIDs.VOLUME[identifier]][0])\n        } else {\n          NotificationMiddleware.onError(\n            NotificationMiddlewareContext.SLIM,\n            new CustomError(\n              errorTypes.ENCODINGANDDECODING,\n              `The VOLUME images for optical path \"${identifier}\" ` +\n              'lack the Pyramid UID, while the images for other optical paths ' +\n              'contain it.'\n            )\n          )\n        }\n      } else {\n        if (requirePyramidUID) {\n          NotificationMiddleware.onError(\n            NotificationMiddlewareContext.SLIM,\n            new CustomError(\n              errorTypes.ENCODINGANDDECODING,\n              `The VOLUME images for optical path \"${identifier}\" ` +\n              'lack the Pyramid UID, while the images for other optical paths ' +\n              'contain it.'\n            )\n          )\n        }\n      }\n    })\n\n    if (acquisitionUIDs.size > 1) {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.ENCODINGANDDECODING,\n          'All VOLUME images of a slide must be part of the same  ' +\n          'acquisition and have the same Acquisition UID.'\n        )\n      )\n    } else if (acquisitionUIDs.size === 1) {\n      this.acquisitionUID = [...acquisitionUIDs][0]\n    } else {\n      this.acquisitionUID = null\n    }\n\n    this.areVolumeImagesMonochrome = (\n      this.volumeImages[0].SamplesPerPixel === 1 &&\n      this.volumeImages[0].PhotometricInterpretation === 'MONOCHROME2'\n    )\n\n    this.description = (\n      options.description !== undefined ? options.description : ''\n    )\n  }\n}\n\n/**\n * Create slides.\n *\n * @param imagesPerSeries - Image instances grouped per series\n * @param referenceSeriesInstanceUID - Unique identifier of the series that serves as a reference for the slide\n * @returns Slides\n */\nconst createSlides = (\n  images: dmv.metadata.VLWholeSlideMicroscopyImage[][]\n): Slide[] => {\n  const slideMetadata: SlideImageCollection[] = []\n  images.forEach((series) => {\n    if (series.length > 0) {\n      const volumeImages = series.filter((image) => {\n        return (\n          hasImageFlavor(image, ImageFlavors.VOLUME) ||\n          hasImageFlavor(image, ImageFlavors.THUMBNAIL)\n        )\n      })\n      if (volumeImages.length > 0) {\n        const refImage = volumeImages[0]\n        const filteredVolumeImages = volumeImages.filter((image) => {\n          return refImage.SamplesPerPixel === image.SamplesPerPixel\n        })\n        const slideMetadataIndex = slideMetadata.findIndex((slide) => {\n          return _doesImageBelongToSlide(slide, refImage)\n        })\n\n        const labelImages = series.filter((image) => {\n          return hasImageFlavor(image, ImageFlavors.LABEL)\n        })\n        let filteredLabelImages: dmv.metadata.VLWholeSlideMicroscopyImage[]\n        if (labelImages.length > 1) {\n          filteredLabelImages = labelImages.filter((image) => {\n            return areSameAcquisition(image, refImage)\n          })\n        } else {\n          filteredLabelImages = labelImages\n        }\n        const overviewImages = series.filter((image) => {\n          return hasImageFlavor(image, ImageFlavors.OVERVIEW)\n        })\n        let filteredOverviewImages: dmv.metadata.VLWholeSlideMicroscopyImage[]\n        if (overviewImages.length > 1) {\n          filteredOverviewImages = overviewImages.filter((image) => {\n            return areSameAcquisition(image, refImage)\n          })\n        } else {\n          filteredOverviewImages = overviewImages\n        }\n\n        if (slideMetadataIndex === -1) {\n          const slideMetadataItem: SlideImageCollection = {\n            acquisitionUID: refImage.AcquisitionUID,\n            frameOfReferenceUID: refImage.FrameOfReferenceUID,\n            containerIdentifier: refImage.ContainerIdentifier,\n            volumeImages: filteredVolumeImages,\n            labelImages: filteredLabelImages,\n            overviewImages: filteredOverviewImages\n          }\n          slideMetadata.push(slideMetadataItem)\n        } else {\n          const slideMetadataItem = slideMetadata[slideMetadataIndex]\n          slideMetadataItem.volumeImages.push(...filteredVolumeImages)\n          slideMetadataItem.labelImages.push(...filteredLabelImages)\n          slideMetadataItem.overviewImages.push(...filteredOverviewImages)\n        }\n      }\n    }\n  })\n\n  let slides: Slide[] = slideMetadata.map((item) => {\n    return new Slide({\n      images: [\n        ...item.volumeImages,\n        ...item.labelImages,\n        ...item.overviewImages\n      ]\n    })\n  })\n  slides = slides.sort((a, b) => {\n    const imgA = a.volumeImages[0]\n    const imgB = b.volumeImages[0]\n    if (imgA.ContainerIdentifier != null && imgB.ContainerIdentifier != null) {\n      return Number(imgA.ContainerIdentifier) - Number(imgB.ContainerIdentifier)\n    } else {\n      return 0\n    }\n  })\n\n  return slides\n}\n\n/**\n * Check if instance belongs to the slide.\n *\n * Compares values of Frame of Reference UID and Container Identifier attributes.\n *\n * @param slide - Slide metadata object\n * @param image - Metadata of VOLUME, LABEL or OVERVIEW image instance\n */\nfunction _doesImageBelongToSlide (\n  slide: SlideImageCollection,\n  image: dmv.metadata.VLWholeSlideMicroscopyImage\n): boolean {\n  if (\n    slide.frameOfReferenceUID === image.FrameOfReferenceUID &&\n    slide.containerIdentifier === image.ContainerIdentifier &&\n    slide.acquisitionUID === image.AcquisitionUID\n  ) {\n    return true\n  }\n  return false\n}\n\nexport { Slide, createSlides }\n","import * as dmv from 'dicom-microscopy-viewer'\n\nimport DicomWebManager from '../DicomWebManager'\nimport { StorageClasses } from '../data/uids'\nimport { CustomError, errorTypes } from '../utils/CustomError'\nimport NotificationMiddleware, {\n  NotificationMiddlewareContext\n} from './NotificationMiddleware'\nimport { createSlides, Slide } from '../data/slides'\n\ninterface FetchImageMetadataParams {\n  clients: { [key: string]: DicomWebManager }\n  studyInstanceUID: string\n  onSuccess: (slides: Slide[]) => void\n  onError: (error: Error) => void\n}\n\nexport const fetchImageMetadata = async ({\n  clients,\n  studyInstanceUID,\n  onSuccess,\n  onError\n}: FetchImageMetadataParams): Promise<void> => {\n  try {\n    const images: dmv.metadata.VLWholeSlideMicroscopyImage[][] = []\n    console.info(`search for series of study \"${studyInstanceUID}\"...`)\n\n    const client = clients[StorageClasses.VL_WHOLE_SLIDE_MICROSCOPY_IMAGE]\n    const matchedSeries = await client.searchForSeries({\n      queryParams: {\n        Modality: 'SM',\n        StudyInstanceUID: studyInstanceUID\n      }\n    })\n\n    await Promise.all(\n      matchedSeries.map(async (s) => {\n        const { dataset } = dmv.metadata.formatMetadata(s)\n        const loadingSeries = dataset as dmv.metadata.Series\n        console.info(\n          `retrieve metadata of series \"${loadingSeries.SeriesInstanceUID}\"`\n        )\n        const retrievedMetadata = await client.retrieveSeriesMetadata({\n          studyInstanceUID: studyInstanceUID,\n          seriesInstanceUID: loadingSeries.SeriesInstanceUID\n        })\n\n        const seriesImages: dmv.metadata.VLWholeSlideMicroscopyImage[] = []\n        retrievedMetadata.forEach((item) => {\n          if (\n            item['00080016']?.Value?.[0] ===\n            StorageClasses.VL_WHOLE_SLIDE_MICROSCOPY_IMAGE\n          ) {\n            const image = new dmv.metadata.VLWholeSlideMicroscopyImage({\n              metadata: item\n            })\n            seriesImages.push(image)\n          }\n        })\n\n        if (seriesImages.length > 0) {\n          images.push(seriesImages)\n        }\n      })\n    )\n    const newSlides = createSlides(images)\n    onSuccess(newSlides)\n  } catch (err) {\n    console.error(err)\n    const customError = new CustomError(\n      errorTypes.ENCODINGANDDECODING,\n      'Image metadata could not be retrieved or decoded.'\n    )\n    onError(customError)\n    NotificationMiddleware.onError(\n      NotificationMiddlewareContext.SLIM,\n      customError\n    )\n  }\n}\n","import { useState, useEffect } from 'react'\n\nimport DicomWebManager from '../DicomWebManager'\nimport { Slide } from '../data/slides'\nimport { fetchImageMetadata } from '../services/fetchImageMetadata'\n\ninterface UseSlidesProps {\n  clients: { [key: string]: DicomWebManager }\n  studyInstanceUID: string\n}\n\ninterface UseSlidesReturn {\n  slides: Slide[]\n  isLoading: boolean\n  error: Error | null\n}\n\nconst slidesCache = new Map<string, Slide[]>()\nconst pendingRequests = new Map<string, Promise<Slide[]>>()\n\n/**\n * Hook to fetch and manage whole slide microscopy images for a given study.\n * Values are cached so they can be reused if props are not provided.\n *\n * @param props - Hook configuration props\n * @param props.clients - Map of DICOM web clients keyed by storage class\n */\nexport const useSlides = ({ clients, studyInstanceUID }: UseSlidesProps): UseSlidesReturn => {\n  const [slides, setSlides] = useState<Slide[]>([])\n  const [isLoading, setIsLoading] = useState<boolean>(false)\n  const [error, setError] = useState<Error | null>(null)\n\n  useEffect(() => {\n    if (studyInstanceUID === undefined) {\n      setSlides([])\n      setIsLoading(false)\n      return\n    }\n\n    const cachedData = slidesCache.get(studyInstanceUID)\n    if (cachedData !== undefined) {\n      setSlides(cachedData)\n      setIsLoading(false)\n      return\n    }\n\n    setIsLoading(true)\n\n    const fetchSlides = async (): Promise<void> => {\n      // Check if there's already a pending request for this study\n      let pendingRequest = pendingRequests.get(studyInstanceUID)\n\n      if (pendingRequest === undefined) {\n        // Create a new promise for this request\n        pendingRequest = new Promise((resolve, reject): void => {\n          fetchImageMetadata({\n            clients,\n            studyInstanceUID,\n            onSuccess: (newSlides) => {\n              slidesCache.set(studyInstanceUID, newSlides)\n              resolve(newSlides)\n            },\n            onError: (err) => {\n              reject(err)\n            }\n          }).catch((err) => {\n            reject(err)\n          })\n        })\n        pendingRequests.set(studyInstanceUID, pendingRequest)\n      }\n\n      try {\n        const newSlides = await pendingRequest\n        setSlides(newSlides)\n        setError(null)\n      } catch (err) {\n        setError(err as Error)\n        setSlides([])\n      } finally {\n        pendingRequests.delete(studyInstanceUID)\n        setIsLoading(false)\n      }\n    }\n\n    void fetchSlides()\n  }, [clients, studyInstanceUID])\n\n  return { slides, isLoading, error }\n}\n","import { Routes, Route, useLocation, useParams } from 'react-router-dom'\nimport { Layout, Menu } from 'antd'\n\nimport { AnnotationSettings } from '../AppConfig'\nimport ClinicalTrial from './ClinicalTrial'\nimport DicomWebManager from '../DicomWebManager'\nimport Patient from './Patient'\nimport Study from './Study'\nimport SlideList from './SlideList'\nimport SlideViewer from './SlideViewer'\n\nimport { User } from '../auth'\nimport { Slide } from '../data/slides'\nimport { RouteComponentProps, withRouter } from '../utils/router'\nimport { useSlides } from '../hooks/useSlides'\n\nfunction ParametrizedSlideViewer ({\n  clients,\n  slides,\n  user,\n  app,\n  preload,\n  enableAnnotationTools,\n  annotations\n}: {\n  clients: { [key: string]: DicomWebManager }\n  slides: Slide[]\n  user?: User\n  app: {\n    name: string\n    version: string\n    uid: string\n    organization?: string\n  }\n  preload: boolean\n  enableAnnotationTools: boolean\n  annotations: AnnotationSettings[]\n}): JSX.Element | null {\n  const { studyInstanceUID, seriesInstanceUID } = useParams()\n  const location = useLocation()\n\n  const selectedSlide = slides.find((slide: Slide) => {\n    return slide.seriesInstanceUIDs.find((uid: string) => {\n      return uid === seriesInstanceUID\n    })\n  })\n  const searchParams = new URLSearchParams(location.search)\n  let presentationStateUID: string | null | undefined\n  if (!searchParams.has('access_token')) {\n    presentationStateUID = searchParams.get('state')\n    if (presentationStateUID === null) {\n      presentationStateUID = undefined\n    }\n  }\n  let viewer = null\n  if (selectedSlide != null) {\n    viewer = (\n      <SlideViewer\n        clients={clients}\n        studyInstanceUID={studyInstanceUID}\n        seriesInstanceUID={seriesInstanceUID}\n        selectedPresentationStateUID={presentationStateUID}\n        slide={selectedSlide}\n        preload={preload}\n        annotations={annotations}\n        enableAnnotationTools={enableAnnotationTools}\n        app={app}\n        user={user}\n      />\n    )\n  }\n  return viewer\n}\n\ninterface ViewerProps extends RouteComponentProps {\n  clients: { [key: string]: DicomWebManager }\n  studyInstanceUID: string\n  app: {\n    name: string\n    version: string\n    uid: string\n    organization?: string\n  }\n  annotations: AnnotationSettings[]\n  enableAnnotationTools: boolean\n  preload: boolean\n  user?: {\n    name: string\n    email: string\n  }\n}\n\nfunction Viewer (props: ViewerProps): JSX.Element | null {\n  const { clients, studyInstanceUID, location, navigate } = props\n  const { slides, isLoading } = useSlides({ clients, studyInstanceUID })\n\n  const handleSeriesSelection = ({ seriesInstanceUID }: { seriesInstanceUID: string }): void => {\n    console.info(`switch to series \"${seriesInstanceUID}\"`)\n    let urlPath = (\n      `/studies/${studyInstanceUID}` +\n      `/series/${seriesInstanceUID}`\n    )\n\n    if (location.pathname.includes('/projects/')) {\n      urlPath = location.pathname\n      if (!location.pathname.includes('/series/')) {\n        urlPath += `/series/${seriesInstanceUID}`\n      } else {\n        urlPath = urlPath.replace(/\\/series\\/[^/]+/, `/series/${seriesInstanceUID}`)\n      }\n    }\n\n    if (\n      location.pathname.includes('/series/') &&\n      location.search != null\n    ) {\n      urlPath += location.search\n    }\n\n    navigate(urlPath, { replace: true })\n  }\n\n  if (isLoading) {\n    return null\n  }\n\n  if (slides.length === 0) {\n    return null\n  }\n\n  const firstSlide = slides[0]\n  const volumeInstances = firstSlide.volumeImages\n  if (volumeInstances.length === 0) {\n    return null\n  }\n  const refImage = volumeInstances[0]\n\n  /* If a series is encoded in the path, route the viewer to this series.\n   * Otherwise select the first series correspondent to\n   * the first slide contained in the study.\n   */\n  let selectedSeriesInstanceUID: string\n  if (location.pathname.includes('series/')) {\n    const seriesFragment = location.pathname.split('series/')[1]\n    selectedSeriesInstanceUID = seriesFragment.includes('/') ? seriesFragment.split('/')[0] : seriesFragment\n  } else {\n    selectedSeriesInstanceUID = volumeInstances[0].SeriesInstanceUID\n  }\n\n  let clinicalTrialMenu\n  if (refImage.ClinicalTrialSponsorName != null) {\n    clinicalTrialMenu = (\n      <Menu.SubMenu key='clinical-trial' title='Clinical Trial'>\n        <ClinicalTrial metadata={refImage} />\n      </Menu.SubMenu>\n    )\n  }\n\n  return (\n    <Layout style={{ height: '100%' }} hasSider>\n      <Layout.Sider\n        width={300}\n        style={{\n          height: '100%',\n          borderRight: 'solid',\n          borderRightWidth: 0.25,\n          overflow: 'hidden',\n          background: 'none'\n        }}\n      >\n        <Menu\n          mode='inline'\n          defaultOpenKeys={['patient', 'study', 'clinical-trial', 'slides']}\n          style={{ height: '100%' }}\n          inlineIndent={14}\n        >\n          <Menu.SubMenu key='patient' title='Patient'>\n            <Patient metadata={refImage} />\n          </Menu.SubMenu>\n          <Menu.SubMenu key='study' title='Study'>\n            <Study metadata={refImage} />\n          </Menu.SubMenu>\n          {clinicalTrialMenu}\n          <Menu.SubMenu key='slides' title='Slides'>\n            <SlideList\n              clients={props.clients}\n              metadata={slides}\n              selectedSeriesInstanceUID={selectedSeriesInstanceUID}\n              onSeriesSelection={handleSeriesSelection}\n            />\n          </Menu.SubMenu>\n        </Menu>\n      </Layout.Sider>\n\n      <Routes>\n        <Route\n          path='/series/:seriesInstanceUID'\n          element={\n            <ParametrizedSlideViewer\n              clients={props.clients}\n              slides={slides}\n              preload={props.preload}\n              annotations={props.annotations}\n              enableAnnotationTools={props.enableAnnotationTools}\n              app={props.app}\n              user={props.user}\n            />\n          }\n        />\n      </Routes>\n    </Layout>\n  )\n}\n\nexport default withRouter(Viewer)\n","import dcmjs from 'dcmjs'\n\nconst { DicomMetaDictionary } = dcmjs.data\n\ninterface TagInfo {\n  tag: string\n  vr: string\n  keyword: string\n  value: string\n  children?: TagInfo[]\n  level: number\n}\n\nexport interface DicomTag {\n  name: string\n  vr: string\n  Value?: any[]\n  [key: string]: any\n}\n\nconst formatValue = (val: any): string => {\n  if (typeof val === 'object' && val !== null) {\n    return JSON.stringify(val)\n  }\n  return String(val)\n}\n\nexport const formatTagValue = (tag: DicomTag): string => {\n  if (tag.Value == null) return ''\n\n  if (Array.isArray(tag.Value)) {\n    return tag.Value.map(formatValue).join(', ')\n  }\n\n  return formatValue(tag.Value)\n}\n\n/**\n * Processes DICOM metadata and returns a flattened array of tag information\n * @param metadata - The DICOM metadata object to process\n * @param depth - The current depth level for nested sequences (default: 0)\n * @returns Array of processed tag information\n */\nexport function getRows (metadata: Record<string, any>, depth = 0): TagInfo[] {\n  if (metadata === undefined || metadata === null) return []\n  const keywords = Object.keys(metadata).filter(key => key !== '_vrMap')\n\n  return keywords.flatMap(keyword => {\n    // @ts-expect-error\n    const tagInfo = DicomMetaDictionary.nameMap[keyword] as TagInfo | undefined\n    let value = metadata[keyword]\n\n    // Handle private or unknown tags\n    if (tagInfo === undefined) {\n      const regex = /[0-9A-Fa-f]{6}/g\n      if (keyword.match(regex) == null) return []\n\n      return [{\n        tag: `(${keyword.substring(0, 4)},${keyword.substring(4, 8)})`,\n        vr: '',\n        keyword: 'Private Tag',\n        value: value?.toString() ?? '',\n        level: depth\n      }]\n    }\n\n    // Handle sequence values (SQ VR)\n    if (tagInfo.vr === 'SQ' && value !== undefined) {\n      const sequenceItems = Array.isArray(value) ? value : [value]\n\n      // Create a parent sequence node\n      const sequenceNode: TagInfo = {\n        tag: tagInfo.tag,\n        vr: tagInfo.vr,\n        keyword,\n        value: `Sequence with ${sequenceItems.length} item(s)`,\n        level: depth,\n        children: []\n      }\n\n      // Create individual nodes for each sequence item\n      sequenceNode.children = sequenceItems.map((item, index) => {\n        const itemNode: TagInfo = {\n          tag: `${tagInfo.tag}.${index + 1}`,\n          vr: 'Item',\n          keyword: `Item ${index + 1}`,\n          value: `Sequence Item ${index + 1}`,\n          level: depth + 1,\n          children: getRows(item, depth + 2)\n        }\n        return itemNode\n      })\n\n      return [sequenceNode]\n    }\n\n    // Handle array values\n    if (Array.isArray(value)) {\n      value = value.map(formatValue).join('\\\\')\n    } else if (typeof value === 'object' && value !== null) {\n      value = formatValue(value)\n    }\n\n    return [{\n      tag: tagInfo.tag,\n      vr: tagInfo.vr,\n      keyword: keyword.replace('RETIRED_', ''),\n      value: value?.toString() ?? '',\n      level: depth\n    }]\n  })\n}\n\n/**\n * Sorts DICOM tags alphabetically by tag value\n * @param metadata - The DICOM metadata object to process\n * @returns Sorted array of tag information\n */\nexport function getSortedTags (metadata: Record<string, any>): TagInfo[] {\n  const tagList = getRows(metadata)\n  return tagList.sort((a, b) => a.tag.localeCompare(b.tag))\n}\n","/**\n * Formats a DICOM datetime string (YYYYMMDD:HHmmss) into a human-readable format\n *\n * @param dateStr - DICOM datetime string in format \"YYYYMMDD:HHmmss\"\n * @returns Formatted date string (e.g., \"Mon, Jan 1 2024\")\n * @example\n * formatDicomDate(\"20240101:120000\") // Returns \"Mon, Jan 1 2024\"\n * formatDicomDate(\"invalid\") // Returns \"invalid\"\n */\nexport const formatDicomDate = (dateStr: string): string => {\n  // Parse YYYYMMDD:HHmmss format\n  const match = dateStr.match(/^(\\d{4})(\\d{2})(\\d{2}):(\\d{2})(\\d{2})(\\d{2})/)\n  if (match == null) return dateStr\n\n  const [, year, month, day, hour, minute, second] = match\n\n  // Validate month and day\n  const monthNum = parseInt(month)\n  const dayNum = parseInt(day)\n  if (monthNum < 1 || monthNum > 12 || dayNum < 1 || dayNum > 31) {\n    return dateStr\n  }\n\n  const date = new Date(\n    parseInt(year),\n    monthNum - 1, // months are 0-based\n    dayNum,\n    parseInt(hour),\n    parseInt(minute),\n    parseInt(second)\n  )\n\n  // Check if the date is invalid or if the month/day combination is invalid\n  // This catches cases like February 31st where the date rolls over to March\n  if (\n    date.getMonth() !== monthNum - 1 || // month rolled over\n    date.getDate() !== dayNum // day rolled over\n  ) {\n    return dateStr\n  }\n\n  // Format parts separately to avoid the extra comma\n  const weekday = date.toLocaleDateString('en-US', { weekday: 'short' })\n  const monthName = date.toLocaleDateString('en-US', { month: 'short' })\n  const dayFormatted = date.getDate()\n  const yearNum = date.getFullYear()\n\n  return `${weekday}, ${monthName} ${dayFormatted} ${yearNum}`\n}\n","import { v4 as generateUUID } from 'uuid'\n\n/**\n * Consumer must implement:\n * this.listeners = {}\n * this.EVENTS = { \"EVENT_KEY\": \"EVENT_VALUE\" }\n */\nconst pubSubInterface = {\n  subscribe,\n  _broadcastEvent,\n  _unsubscribe,\n  _isValidEvent\n}\n\nexport default pubSubInterface\n\n/**\n * Subscribe to updates.\n *\n * @param {string} eventName The name of the event\n * @param {Function} callback Events callback\n * @return {Object} Observable object with actions\n */\nfunction subscribe (this: PubSubService, eventName: string, callback: Function): { unsubscribe: () => any } {\n  if (this._isValidEvent(eventName)) {\n    const listenerId = generateUUID()\n    const subscription = { id: listenerId, callback }\n\n    // console.info(`Subscribing to '${eventName}'.`);\n    if (Array.isArray(this.listeners[eventName])) {\n      this.listeners[eventName].push(subscription)\n    } else {\n      this.listeners[eventName] = [subscription]\n    }\n\n    return {\n      unsubscribe: () => this._unsubscribe(eventName, listenerId)\n    }\n  } else {\n    throw new Error(`Event ${eventName} not supported.`)\n  }\n}\n\n/**\n * Unsubscribe to measurement updates.\n *\n * @param {string} eventName The name of the event\n * @param {string} listenerId The listeners id\n * @return void\n */\nfunction _unsubscribe (this: PubSubService, eventName: string, listenerId: string): void {\n  if (this.listeners[eventName] === undefined) {\n    return\n  }\n\n  const listeners = this.listeners[eventName]\n  if (Array.isArray(listeners)) {\n    this.listeners[eventName] = listeners.filter(({ id }) => id !== listenerId)\n  } else {\n    this.listeners[eventName] = []\n  }\n}\n\n/**\n * Check if a given event is valid.\n *\n * @param {string} eventName The name of the event\n * @return {boolean} Event name validation\n */\nfunction _isValidEvent (this: PubSubService, eventName: string): boolean {\n  return Object.values(this.EVENTS).includes(eventName)\n}\n\n/**\n * Broadcasts changes.\n *\n * @param {string} eventName - The event name\n * @param {func} callbackProps - Properties to pass callback\n * @return void\n */\nfunction _broadcastEvent (this: PubSubService, eventName: string, callbackProps: any): void {\n  const hasListeners = Object.keys(this.listeners).length > 0\n  const hasCallbacks = Array.isArray(this.listeners[eventName])\n\n  if (hasListeners && hasCallbacks) {\n    this.listeners[eventName].forEach((listener: { id: string, callback: Function }) => {\n      listener.callback(callbackProps)\n    })\n  }\n}\n\n/** Export a PubSubService class to be used instead of the individual items */\nexport class PubSubService {\n  EVENTS: any\n  subscribe: (\n    eventName: string,\n    callback: Function\n  ) => { unsubscribe: () => any }\n\n  _broadcastEvent: (eventName: string, callbackProps: any) => void\n  _unsubscribe: (eventName: string, listenerId: string) => void\n  _isValidEvent: (eventName: string) => boolean\n  listeners: { [key: string]: Array<{ id: string, callback: Function }> }\n  unsubscriptions: any[]\n  constructor (EVENTS: Record<string, string>) {\n    this.EVENTS = EVENTS\n    this.subscribe = subscribe\n    this._broadcastEvent = _broadcastEvent\n    this._unsubscribe = _unsubscribe\n    this._isValidEvent = _isValidEvent\n    this.listeners = {}\n    this.unsubscriptions = []\n  }\n\n  reset (): void {\n    this.unsubscriptions.forEach((unsub) => unsub())\n    this.unsubscriptions = []\n  }\n\n  /**\n   * Creates an event that records whether or not someone\n   * has consumed it.  Call eventData.consume() to consume the event.\n   * Check eventData.isConsumed to see if it is consumed or not.\n   * @param props - to include in the event\n   */\n  protected createConsumableEvent (props: Record<string, any>): Record<string, any> {\n    return {\n      ...props,\n      isConsumed: false,\n      consume: function Consume () {\n        this.isConsumed = true\n      }\n    }\n  }\n}\n","import { Instance, Series } from '../services/DICOMMetadataStore'\n\nfunction createSeriesMetadata (SeriesInstanceUID: string, defaultInstances?: Instance[]): Series {\n  const instances: Instance[] = []\n  const instancesMap = new Map<string, Instance>()\n\n  return {\n    SeriesInstanceUID,\n    Modality: '',\n    SeriesNumber: 0,\n    SeriesDescription: '',\n    SeriesDate: '',\n    SeriesTime: '',\n    ...defaultInstances?.[0],\n    instances,\n    addInstance: function (newInstance: Instance) {\n      this.addInstances([newInstance])\n    },\n    addInstances: function (newInstances: Instance[]) {\n      for (let i = 0, len = newInstances.length; i < len; i++) {\n        const instance = newInstances[i]\n\n        if (!instancesMap.has(instance.SOPInstanceUID)) {\n          instancesMap.set(instance.SOPInstanceUID, instance)\n          instances.push(instance)\n        }\n      }\n    },\n    getInstance: function (SOPInstanceUID: string) {\n      return instancesMap.get(SOPInstanceUID)\n    }\n  }\n}\n\nexport default createSeriesMetadata\n","import createSeriesMetadata from './createSeriesMetadata'\n\nimport { Study, Series, Instance } from '../services/DICOMMetadataStore'\n\nfunction createStudyMetadata (StudyInstanceUID: string): Study {\n  return {\n    StudyInstanceUID,\n    StudyDescription: '',\n    PatientID: '',\n    PatientName: '',\n    StudyDate: '',\n    AccessionNumber: '',\n    NumInstances: 0,\n    ModalitiesInStudy: [],\n    isLoaded: false,\n    series: [] as Series[],\n    /**\n     * @param {object} instance\n     */\n    addInstanceToSeries: function (instance: Instance) {\n      this.addInstancesToSeries([instance])\n    },\n    /**\n     * @param {object[]} instances\n     * @param {string} instances[].SeriesInstanceUID\n     * @param {string} instances[].StudyDescription\n     */\n    addInstancesToSeries: function (instances: Instance[]) {\n      const { SeriesInstanceUID } = instances[0]\n\n      if (this.StudyDescription !== '' && this.StudyDescription !== undefined) {\n        this.StudyDescription = instances[0].StudyDescription\n      }\n\n      let series = this.series.find(\n        (s) => s.SeriesInstanceUID === SeriesInstanceUID\n      )\n\n      if (series == null) {\n        series = createSeriesMetadata(SeriesInstanceUID, instances)\n        this.series.push(series)\n      }\n\n      series.addInstances(instances)\n    },\n\n    setSeriesMetadata: function (\n      SeriesInstanceUID: string,\n      seriesMetadata: any\n    ) {\n      let existingSeries = this.series.find(\n        (s) => s.SeriesInstanceUID === SeriesInstanceUID\n      )\n\n      if (existingSeries != null) {\n        existingSeries = Object.assign(existingSeries, seriesMetadata)\n      } else {\n        const series = createSeriesMetadata(SeriesInstanceUID)\n        this.series.push(Object.assign(series, seriesMetadata))\n      }\n    }\n  }\n}\n\nexport default createStudyMetadata\n","import dcmjs from 'dcmjs'\n\nimport pubSubServiceInterface from '../utils/pubSubServiceInterface'\nimport createStudyMetadata from '../utils/createStudyMetadata'\n\nexport const EVENTS = {\n  STUDY_ADDED: 'event::dicomMetadataStore:studyAdded',\n  INSTANCES_ADDED: 'event::dicomMetadataStore:instancesAdded',\n  SERIES_ADDED: 'event::dicomMetadataStore:seriesAdded',\n  SERIES_UPDATED: 'event::dicomMetadataStore:seriesUpdated'\n}\n\nexport interface Instance {\n  SOPInstanceUID: string\n  SOPClassUID: string\n  Rows: number\n  Columns: number\n  PatientSex: string\n  Modality: string\n  InstanceNumber: string\n  imageId?: string\n  [key: string]: any // For dynamic metadata properties\n}\n\nexport interface Series {\n  Modality: string\n  SeriesInstanceUID: string\n  SeriesNumber: number\n  SeriesDate: string\n  SeriesTime: string\n  SeriesDescription: string\n  instances: Instance[]\n  addInstance: (newInstance: Instance) => void\n  addInstances: (newInstances: Instance[]) => void\n  getInstance: (SOPInstanceUID: string) => Instance | undefined\n}\n\nexport interface Study {\n  StudyInstanceUID: string\n  StudyDescription: string\n  PatientID: string\n  PatientName: string\n  StudyDate: string\n  AccessionNumber: string\n  NumInstances: number\n  ModalitiesInStudy: any[]\n  NumberOfStudyRelatedSeries?: number\n  isLoaded: boolean\n  series: Series[]\n  addInstanceToSeries: (instance: Instance) => void\n  addInstancesToSeries: (instances: Instance[]) => void\n  setSeriesMetadata: (SeriesInstanceUID: string, metadata: any) => void\n}\n\ninterface Model {\n  studies: Study[]\n}\n\nconst _model: Model = {\n  studies: []\n}\n\nfunction _getStudyInstanceUIDs (): string[] {\n  return _model.studies.map((aStudy) => aStudy.StudyInstanceUID)\n}\n\nfunction _getStudy (StudyInstanceUID: string): Study | undefined {\n  return _model.studies.find(\n    (aStudy) => aStudy.StudyInstanceUID === StudyInstanceUID\n  )\n}\n\nfunction _getSeries (StudyInstanceUID: string, SeriesInstanceUID: string): Series | undefined {\n  const study = _getStudy(StudyInstanceUID)\n\n  if (study == null) {\n    return\n  }\n\n  return study.series.find(\n    (aSeries) => aSeries.SeriesInstanceUID === SeriesInstanceUID\n  )\n}\n\nfunction _getInstance (\n  StudyInstanceUID: string,\n  SeriesInstanceUID: string,\n  SOPInstanceUID: string\n): Instance | undefined {\n  const series = _getSeries(StudyInstanceUID, SeriesInstanceUID)\n\n  if (series == null) {\n    return\n  }\n\n  return series.getInstance(SOPInstanceUID)\n}\n\nfunction _getInstanceByImageId (imageId: string): Instance | undefined {\n  for (const study of _model.studies) {\n    for (const series of study.series) {\n      for (const instance of series.instances) {\n        if (instance.imageId === imageId) {\n          return instance\n        }\n      }\n    }\n  }\n}\n\n/**\n * Update the metadata of a specific series\n * @param {*} StudyInstanceUID\n * @param {*} SeriesInstanceUID\n * @param {*} metadata metadata inform of key value pairs\n * @returns\n */\nfunction _updateMetadataForSeries (\n  StudyInstanceUID: string,\n  SeriesInstanceUID: string,\n  metadata: Record<string, any>\n): void {\n  const study = _getStudy(StudyInstanceUID)\n\n  if (study == null) {\n    return\n  }\n\n  const series = study.series.find(\n    (aSeries) => aSeries.SeriesInstanceUID === SeriesInstanceUID\n  )\n\n  if (series == null) {\n    return\n  }\n\n  const { instances } = series\n  instances.forEach((instance) => {\n    Object.keys(metadata).forEach((key) => {\n      if (typeof metadata[key] === 'object') {\n        instance[key] = { ...instance[key], ...metadata[key] }\n      } else {\n        instance[key] = metadata[key]\n      }\n    })\n  })\n}\n\ninterface BaseImplementationType {\n  EVENTS: typeof EVENTS\n  listeners: Record<string, any>\n  addInstance: (dicomJSONDatasetOrP10ArrayBuffer: ArrayBuffer | Record<string, any>) => void\n  addInstances: (instances: Instance[], madeInClient?: boolean) => void\n  updateSeriesMetadata: (seriesMetadata: Record<string, any>) => void\n  addSeriesMetadata: (seriesSummaryMetadata: Array<Record<string, any>>, madeInClient?: boolean) => void\n  addStudy: (study: Record<string, any>) => void\n  getStudyInstanceUIDs: typeof _getStudyInstanceUIDs\n  getStudy: typeof _getStudy\n  getSeries: typeof _getSeries\n  getInstance: typeof _getInstance\n  getInstanceByImageId: typeof _getInstanceByImageId\n  updateMetadataForSeries: typeof _updateMetadataForSeries\n  _broadcastEvent: (eventName: string, data: any) => void\n}\n\nconst BaseImplementation: BaseImplementationType = {\n  EVENTS,\n  listeners: {},\n  addInstance (dicomJSONDatasetOrP10ArrayBuffer) {\n    let dicomJSONDataset\n\n    // If Arraybuffer, parse to DICOMJSON before naturalizing.\n    if (dicomJSONDatasetOrP10ArrayBuffer instanceof ArrayBuffer) {\n      const dicomData = dcmjs.data.DicomMessage.readFile(\n        dicomJSONDatasetOrP10ArrayBuffer\n      )\n\n      dicomJSONDataset = dicomData.dict\n    } else {\n      dicomJSONDataset = dicomJSONDatasetOrP10ArrayBuffer\n    }\n\n    let naturalizedDataset: Instance\n\n    if (!('SeriesInstanceUID' in dicomJSONDataset)) {\n      naturalizedDataset =\n        dcmjs.data.DicomMetaDictionary.naturalizeDataset(dicomJSONDataset) as Instance\n    } else {\n      naturalizedDataset = dicomJSONDataset as unknown as Instance\n    }\n\n    const { StudyInstanceUID } = naturalizedDataset\n\n    let study = _model.studies.find(\n      (study) => study.StudyInstanceUID === StudyInstanceUID\n    )\n\n    if (study == null) {\n      _model.studies.push(createStudyMetadata(StudyInstanceUID))\n      study = _model.studies[_model.studies.length - 1]\n    }\n\n    study.addInstanceToSeries(naturalizedDataset)\n  },\n  addInstances (instances, madeInClient = false) {\n    const { StudyInstanceUID, SeriesInstanceUID } = instances[0]\n\n    let study = _model.studies.find(\n      (study) => study.StudyInstanceUID === StudyInstanceUID\n    )\n\n    if (study == null) {\n      _model.studies.push(createStudyMetadata(StudyInstanceUID))\n      study = _model.studies[_model.studies.length - 1]\n    }\n\n    study.addInstancesToSeries(instances)\n\n    // Broadcast an event even if we used cached data.\n    // This is because the mode needs to listen to instances that are added to build up its active displaySets.\n    // It will see there are cached displaySets and end early if this Series has already been fired in this\n    // Mode session for some reason.\n    this._broadcastEvent(EVENTS.INSTANCES_ADDED, {\n      StudyInstanceUID,\n      SeriesInstanceUID,\n      madeInClient\n    })\n  },\n  updateSeriesMetadata (seriesMetadata) {\n    const { StudyInstanceUID, SeriesInstanceUID } = seriesMetadata\n    const series = _getSeries(StudyInstanceUID, SeriesInstanceUID)\n    if (series == null) {\n      return\n    }\n\n    const study = _getStudy(StudyInstanceUID)\n    if (study != null) {\n      study.setSeriesMetadata(SeriesInstanceUID, seriesMetadata)\n    }\n  },\n  addSeriesMetadata (seriesSummaryMetadata, madeInClient = false) {\n    if (\n      seriesSummaryMetadata === undefined ||\n      seriesSummaryMetadata.length === 0 ||\n      seriesSummaryMetadata[0] === undefined\n    ) {\n      return\n    }\n\n    const { StudyInstanceUID } = seriesSummaryMetadata[0]\n    let study = _getStudy(StudyInstanceUID)\n    if (study == null) {\n      study = createStudyMetadata(StudyInstanceUID)\n      // Will typically be undefined with a compliant DICOMweb server, reset later\n      study.StudyDescription = seriesSummaryMetadata[0].StudyDescription\n      seriesSummaryMetadata?.forEach((item) => {\n        if (study !== undefined && !study.ModalitiesInStudy?.includes(item.Modality)) {\n          study.ModalitiesInStudy?.push(item.Modality)\n        }\n      })\n      study.NumberOfStudyRelatedSeries = seriesSummaryMetadata.length\n      _model.studies.push(study)\n    }\n\n    seriesSummaryMetadata.forEach((series) => {\n      const { SeriesInstanceUID } = series\n      study?.setSeriesMetadata(SeriesInstanceUID, series)\n    })\n\n    this._broadcastEvent(EVENTS.SERIES_ADDED, {\n      StudyInstanceUID,\n      seriesSummaryMetadata,\n      madeInClient\n    })\n  },\n  addStudy (study) {\n    const { StudyInstanceUID } = study\n\n    const existingStudy = _model.studies.find(\n      (study) => study.StudyInstanceUID === StudyInstanceUID\n    )\n\n    if (existingStudy == null) {\n      const newStudy = createStudyMetadata(StudyInstanceUID)\n\n      newStudy.PatientID = study.PatientID\n      newStudy.PatientName = study.PatientName\n      newStudy.StudyDate = study.StudyDate\n      newStudy.ModalitiesInStudy = study.ModalitiesInStudy\n      newStudy.StudyDescription = study.StudyDescription\n      newStudy.AccessionNumber = study.AccessionNumber\n      newStudy.NumInstances = study.NumInstances // todo: Correct naming?\n\n      _model.studies.push(newStudy)\n    }\n  },\n  getStudyInstanceUIDs: _getStudyInstanceUIDs,\n  getStudy: _getStudy,\n  getSeries: _getSeries,\n  getInstance: _getInstance,\n  getInstanceByImageId: _getInstanceByImageId,\n  updateMetadataForSeries: _updateMetadataForSeries,\n  _broadcastEvent (eventName: string, data: any): void {\n  }\n}\n\ninterface DicomMetadataStoreType extends BaseImplementationType {\n  subscribe: (event: string, callback: (data: any) => void) => { unsubscribe: () => any }\n  unsubscribe: (event: string, callback: (data: any) => void) => void\n}\n\nconst DicomMetadataStore = Object.assign(\n  {},\n  BaseImplementation,\n  pubSubServiceInterface\n) as unknown as DicomMetadataStoreType\n\nexport { DicomMetadataStore }\nexport default DicomMetadataStore\n","import { useState, useEffect } from 'react'\n\n/**\n * A hook that delays updating a value for the specified time\n * @param value The value to debounce\n * @param delay The delay time in milliseconds\n * @returns The debounced value\n * @example\n * const debouncedSearchTerm = useDebounce(searchTerm, 300)\n */\nexport const useDebounce = <T,>(value: T, delay: number): T => {\n  const [debouncedValue, setDebouncedValue] = useState<T>(value)\n\n  useEffect(() => {\n    const timer = setTimeout(() => {\n      setDebouncedValue(value)\n    }, delay)\n\n    return () => {\n      clearTimeout(timer)\n    }\n  }, [value, delay])\n\n  return debouncedValue\n} ","import { useState, useMemo, useEffect } from 'react'\nimport { Select, Input, Slider, Typography, Table } from 'antd'\nimport { SearchOutlined } from '@ant-design/icons'\n\nimport DicomWebManager from '../../DicomWebManager'\nimport './DicomTagBrowser.css'\nimport { useSlides } from '../../hooks/useSlides'\nimport { getSortedTags } from './dicomTagUtils'\nimport { formatDicomDate } from '../../utils/formatDicomDate'\nimport DicomMetadataStore, { Series, Study } from '../../services/DICOMMetadataStore'\nimport { useDebounce } from '../../hooks/useDebounce'\n\nconst { Option } = Select\n\ninterface DisplaySet {\n  displaySetInstanceUID: number\n  SeriesDate?: string\n  SeriesTime?: string\n  SeriesNumber: string\n  SeriesDescription?: string\n  Modality: string\n  images: any[]\n}\n\ninterface TableDataItem {\n  key: string\n  tag: string\n  vr: string\n  keyword: string\n  value: string\n  children?: TableDataItem[]\n}\n\ninterface DicomTagBrowserProps {\n  clients: { [key: string]: DicomWebManager }\n  studyInstanceUID: string\n}\n\nconst DicomTagBrowser = ({ clients, studyInstanceUID }: DicomTagBrowserProps): JSX.Element => {\n  const { slides, isLoading } = useSlides({ clients, studyInstanceUID })\n  const [study, setStudy] = useState<Study | undefined>(undefined)\n\n  const [displaySets, setDisplaySets] = useState<DisplaySet[]>([])\n  const [selectedDisplaySetInstanceUID, setSelectedDisplaySetInstanceUID] = useState(0)\n  const [instanceNumber, setInstanceNumber] = useState(1)\n  const [filterValue, setFilterValue] = useState('')\n  const [expandedKeys, setExpandedKeys] = useState<string[]>([])\n  const [searchInput, setSearchInput] = useState('')\n\n  const debouncedSearchValue = useDebounce(searchInput, 300)\n\n  useEffect(() => {\n    setFilterValue(debouncedSearchValue)\n  }, [debouncedSearchValue])\n\n  useEffect(() => {\n    const handler = (event: any): void => {\n      const study: Study | undefined = Object.assign({}, DicomMetadataStore.getStudy(studyInstanceUID))\n      setStudy(study)\n    }\n    const seriesAddedSubscription = DicomMetadataStore.subscribe(DicomMetadataStore.EVENTS.SERIES_ADDED, handler)\n    const instancesAddedSubscription = DicomMetadataStore.subscribe(DicomMetadataStore.EVENTS.INSTANCES_ADDED, handler)\n\n    const study = Object.assign({}, DicomMetadataStore.getStudy(studyInstanceUID))\n    setStudy(study)\n\n    return () => {\n      seriesAddedSubscription.unsubscribe()\n      instancesAddedSubscription.unsubscribe()\n    }\n  }, [studyInstanceUID])\n\n  useEffect(() => {\n    let displaySets: DisplaySet[] = []\n    let derivedDisplaySets: DisplaySet[] = []\n    const processedSeries: string[] = []\n    let index = 0\n\n    if (slides.length > 0) {\n      displaySets = slides\n        .map((slide): DisplaySet | null => {\n          const { volumeImages } = slide\n          if (volumeImages?.[0] === undefined) return null\n\n          const {\n            SeriesDate,\n            SeriesTime,\n            SeriesNumber,\n            SeriesInstanceUID,\n            SeriesDescription,\n            Modality\n          } = volumeImages[0]\n\n          processedSeries.push(SeriesInstanceUID)\n\n          const ds: DisplaySet = {\n            displaySetInstanceUID: index,\n            SeriesDate,\n            SeriesTime,\n            SeriesInstanceUID,\n            // @ts-expect-error\n            SeriesNumber,\n            SeriesDescription,\n            Modality,\n            images: volumeImages\n          }\n          index++\n          return ds\n        })\n        .filter((set): set is DisplaySet => set !== null)\n    }\n\n    if (study !== undefined && study.series?.length > 0) {\n      derivedDisplaySets = study.series.filter(s => !processedSeries.includes(s.SeriesInstanceUID))\n        .map((series: Series): DisplaySet => {\n          const ds: DisplaySet = {\n            displaySetInstanceUID: index,\n            SeriesDate: series.SeriesDate,\n            SeriesTime: series.SeriesTime,\n            // @ts-expect-error\n            SeriesNumber: series.SeriesNumber,\n            SeriesDescription: series.SeriesDescription,\n            SeriesInstanceUID: series.SeriesInstanceUID,\n            Modality: series.Modality,\n            images: series?.instances?.length > 0 ? series.instances : [series]\n          }\n          index++\n          return ds\n        })\n    }\n\n    setDisplaySets([...displaySets, ...derivedDisplaySets])\n  }, [slides, study])\n\n  const displaySetList = useMemo(() => {\n    displaySets.sort((a, b) => Number(a.SeriesNumber) - Number(b.SeriesNumber))\n    return displaySets.map((displaySet, index) => {\n      const {\n        SeriesDate = '',\n        SeriesTime = '',\n        SeriesNumber = '',\n        SeriesDescription = '',\n        Modality = ''\n      } = displaySet\n\n      const dateStr = `${SeriesDate}:${SeriesTime}`.split('.')[0]\n      const displayDate = formatDicomDate(dateStr)\n\n      return {\n        value: index,\n        label: `${SeriesNumber} (${Modality}): ${SeriesDescription}`,\n        description: displayDate\n      }\n    })\n  }, [displaySets])\n\n  const showInstanceList =\n    displaySets[selectedDisplaySetInstanceUID]?.images.length > 1\n\n  console.debug('displaySets:', displaySets)\n\n  const instanceSliderMarks = useMemo(() => {\n    if (displaySets[selectedDisplaySetInstanceUID] === undefined) return {}\n    const totalInstances = displaySets[selectedDisplaySetInstanceUID].images.length\n\n    // Create marks for first, middle, and last instances\n    const marks: Record<number, string> = {\n      1: '1', // First\n      [Math.ceil(totalInstances / 2)]: String(Math.ceil(totalInstances / 2)), // Middle\n      [totalInstances]: String(totalInstances) // Last\n    }\n\n    return marks\n  }, [selectedDisplaySetInstanceUID, displaySets])\n\n  const columns = [\n    {\n      title: 'Tag',\n      dataIndex: 'tag',\n      key: 'tag',\n      width: '30%'\n    },\n    {\n      title: 'VR',\n      dataIndex: 'vr',\n      key: 'vr',\n      width: '5%'\n    },\n    {\n      title: 'Keyword',\n      dataIndex: 'keyword',\n      key: 'keyword',\n      width: '30%'\n    },\n    {\n      title: 'Value',\n      dataIndex: 'value',\n      key: 'value',\n      width: '40%'\n    }\n  ]\n\n  const tableData = useMemo(() => {\n    const transformTagsToTableData = (tags: any[], parentKey = ''): TableDataItem[] => {\n      return tags.map((tag, index) => {\n        // Create a unique key using tag value if available, otherwise use index\n        const keyBase: string = tag.tag !== '' ? tag.tag.replace(/[(),]/g, '') : index.toString()\n        const currentKey: string = parentKey !== '' ? `${parentKey}-${keyBase}` : keyBase\n\n        const item: TableDataItem = {\n          key: currentKey,\n          tag: tag.tag,\n          vr: tag.vr,\n          keyword: tag.keyword,\n          value: tag.value\n        }\n\n        if (tag.children !== undefined && tag.children.length > 0) {\n          item.children = transformTagsToTableData(tag.children, currentKey)\n        }\n\n        return item\n      })\n    }\n\n    if (displaySets[selectedDisplaySetInstanceUID] === undefined) return []\n    const metadata = displaySets[selectedDisplaySetInstanceUID]?.images[instanceNumber - 1]\n    const tags = getSortedTags(metadata)\n    return transformTagsToTableData(tags)\n  }, [instanceNumber, selectedDisplaySetInstanceUID, displaySets])\n\n  // Reset expanded keys when search value changes\n  useEffect(() => {\n    setExpandedKeys([])\n  }, [filterValue])\n\n  const filteredData = useMemo(() => {\n    if (filterValue === undefined || filterValue === '') return tableData\n\n    const searchLower = filterValue.toLowerCase()\n\n    const nodeMatches = (node: TableDataItem): boolean => {\n      return (\n        (node.tag?.toLowerCase() ?? '').includes(searchLower) ||\n        (node.vr?.toLowerCase() ?? '').includes(searchLower) ||\n        (node.keyword?.toLowerCase() ?? '').includes(searchLower) ||\n        (node.value?.toString().toLowerCase() ?? '').includes(searchLower)\n      )\n    }\n\n    const findMatchingNodes = (nodes: TableDataItem[]): TableDataItem[] => {\n      const results: TableDataItem[] = []\n\n      const searchNode = (node: TableDataItem): void => {\n        if (nodeMatches(node)) {\n          // Create a new matching node with its original structure\n          const matchingNode: TableDataItem = {\n            key: node.key,\n            tag: node.tag,\n            vr: node.vr,\n            keyword: node.keyword,\n            value: node.value\n          }\n\n          // If the node has children, preserve them for expansion\n          matchingNode.children = node?.children?.map((child): TableDataItem => ({\n            key: child.key,\n            tag: child.tag,\n            vr: child.vr,\n            keyword: child.keyword,\n            value: child.value,\n            children: child.children\n          }))\n\n          results.push(matchingNode)\n        }\n\n        // Continue searching through children\n        node?.children?.forEach(searchNode)\n      }\n\n      nodes.forEach(searchNode)\n      return results\n    }\n\n    return findMatchingNodes(tableData)\n  }, [tableData, filterValue])\n\n  if (isLoading) {\n    return <div>Loading...</div>\n  }\n\n  return (\n    <div className='dicom-tag-browser'>\n      <div\n        style={{\n          width: '100%',\n          padding: '16px 20px 20px'\n        }}\n      >\n        <div style={{ display: 'flex', gap: '24px', marginBottom: '32px' }}>\n          <div style={{ flex: 1 }}>\n            <Typography.Text strong style={{ display: 'block', marginBottom: '8px' }}>Slides</Typography.Text>\n            <Select\n              style={{ width: '100%' }}\n              value={selectedDisplaySetInstanceUID}\n              onChange={(value) => {\n                setSelectedDisplaySetInstanceUID(value)\n                setInstanceNumber(1)\n              }}\n              optionLabelProp='label'\n              optionFilterProp='label'\n            >\n              {displaySetList.map((item) => (\n                <Option key={item.value} value={item.value} label={item.label}>\n                  <div>\n                    <div>{item.label}</div>\n                    <div\n                      style={{ fontSize: '12px', color: 'rgba(0, 0, 0, 0.45)' }}\n                    >\n                      {item.description}\n                    </div>\n                  </div>\n                </Option>\n              ))}\n            </Select>\n          </div>\n\n          {showInstanceList && (\n            <div style={{ flex: 1 }}>\n              <Typography.Text strong style={{ display: 'block', marginBottom: '8px' }}>\n                Instance Number: {instanceNumber}\n              </Typography.Text>\n              <Slider\n                min={1}\n                max={displaySets[selectedDisplaySetInstanceUID]?.images.length}\n                value={instanceNumber}\n                onChange={(value) => setInstanceNumber(value)}\n                marks={instanceSliderMarks}\n                tooltip={{\n                  formatter: (value: number | undefined) => value !== undefined ? `Instance ${value}` : ''\n                }}\n              />\n            </div>\n          )}\n        </div>\n\n        <Input\n          style={{ marginBottom: '20px' }}\n          placeholder='Search DICOM tags...'\n          prefix={<SearchOutlined />}\n          onChange={(e) => setSearchInput(e.target.value)}\n          value={searchInput}\n        />\n\n        <Table\n          columns={columns}\n          dataSource={filteredData}\n          pagination={false}\n          expandable={{\n            expandedRowKeys: expandedKeys,\n            onExpandedRowsChange: (keys) => setExpandedKeys(keys as string[])\n          }}\n          size='small'\n          scroll={{ y: 500 }}\n        />\n      </div>\n    </div>\n  )\n}\n\nexport default DicomTagBrowser\n","import React from 'react'\nimport { NavLink } from 'react-router-dom'\nimport {\n  Col,\n  Descriptions,\n  Dropdown,\n  Input,\n  Layout,\n  Modal,\n  Row,\n  Space,\n  Badge,\n  Collapse\n} from 'antd'\nimport {\n  ApiOutlined,\n  CheckOutlined,\n  InfoOutlined,\n  StopOutlined,\n  FileSearchOutlined,\n  UnorderedListOutlined,\n  UserOutlined,\n  SettingOutlined\n} from '@ant-design/icons'\nimport { detect } from 'detect-browser'\n\nimport Button from './Button'\nimport { RouteComponentProps, withRouter } from '../utils/router'\nimport NotificationMiddleware, { NotificationMiddlewareEvents } from '../services/NotificationMiddleware'\nimport { CustomError } from '../utils/CustomError'\nimport { v4 as uuidv4 } from 'uuid'\nimport DicomTagBrowser from './DicomTagBrowser/DicomTagBrowser'\nimport DicomWebManager from '../DicomWebManager'\n\ninterface HeaderProps extends RouteComponentProps {\n  app: {\n    name: string\n    version: string\n    homepage: string\n    uid: string\n    organization?: string\n  }\n  user?: {\n    name: string\n    email: string\n  }\n  clients: { [key: string]: DicomWebManager }\n  showWorklistButton: boolean\n  onServerSelection: ({ url }: { url: string }) => void\n  onUserLogout?: () => void\n  showServerSelectionButton: boolean\n}\n\ninterface ExtendedCustomError extends CustomError {\n  source: string\n}\n\ninterface HeaderState {\n  selectedServerUrl?: string\n  isServerSelectionModalVisible: boolean\n  isServerSelectionDisabled: boolean\n  errorObj: ExtendedCustomError[]\n  errorCategory: string[]\n  warnings: string[]\n}\n\n/**\n * React component for the application header.\n */\nclass Header extends React.Component<HeaderProps, HeaderState> {\n  constructor (props: HeaderProps) {\n    super(props)\n    this.state = {\n      isServerSelectionModalVisible: false,\n      isServerSelectionDisabled: true,\n      errorObj: [],\n      errorCategory: [],\n      warnings: []\n    }\n\n    const onErrorHandler = ({ source, error }: {\n      source: string\n      error: CustomError\n    }): void => {\n      this.setState(state => ({\n        ...state,\n        errorObj: [...state.errorObj, { ...error, source }],\n        errorCategory: [...state.errorCategory, error.type]\n      }))\n    }\n\n    const onWarningHandler = (warning: string): void => {\n      this.setState(state => ({\n        ...state,\n        warnings: [...state.warnings, warning]\n      }))\n    }\n\n    NotificationMiddleware.subscribe(\n      NotificationMiddlewareEvents.OnError,\n      onErrorHandler\n    )\n\n    NotificationMiddleware.subscribe(\n      NotificationMiddlewareEvents.OnWarning,\n      onWarningHandler\n    )\n  }\n\n  componentDidUpdate (prevProps: Readonly<HeaderProps>, prevState: Readonly<HeaderState>): void {\n    if (((prevState.warnings.length > 0) || (prevState.errorObj.length > 0)) && this.props.location.pathname !== prevProps.location.pathname) {\n      this.setState({\n        isServerSelectionModalVisible: false,\n        isServerSelectionDisabled: true,\n        errorObj: [],\n        errorCategory: [],\n        warnings: []\n      })\n    }\n  }\n\n  handleInfoButtonClick = (): void => {\n    const browser = detect()\n    const environment: {\n      browser: {\n        name?: string\n        version?: string\n      }\n      os: {\n        name?: string\n      }\n    } = {\n      browser: {},\n      os: {}\n    }\n    if (browser != null) {\n      environment.browser = {\n        name: browser.name != null ? browser.name : undefined,\n        version: browser.version != null ? browser.version : undefined\n      }\n      environment.os = {\n        name: browser.os != null ? browser.os : undefined\n      }\n    }\n\n    Modal.info({\n      title: 'About',\n      width: 600,\n      content: (\n        <>\n          <Descriptions title='Application' column={1}>\n            <Descriptions.Item label='Name'>\n              {this.props.app.name}\n            </Descriptions.Item>\n            <Descriptions.Item label='Version'>\n              {this.props.app.version}\n            </Descriptions.Item>\n            <Descriptions.Item label='Homepage'>\n              {this.props.app.homepage}\n            </Descriptions.Item>\n          </Descriptions>\n          <Descriptions title='Browser' column={1}>\n            <Descriptions.Item label='Name'>\n              {environment.browser.name}\n            </Descriptions.Item>\n            <Descriptions.Item label='Version'>\n              {environment.browser.version}\n            </Descriptions.Item>\n          </Descriptions>\n          <Descriptions title='Operating System' column={1}>\n            <Descriptions.Item label='Name'>\n              {environment.os.name}\n            </Descriptions.Item>\n          </Descriptions>\n        </>\n      ),\n      onOk (): void {}\n    })\n  }\n\n  handleDicomTagBrowserButtonClick = (): void => {\n    const width = window.innerWidth - 200\n    Modal.info({\n      title: 'DICOM Tag Browser',\n      width,\n      content: <DicomTagBrowser\n        clients={this.props.clients}\n        studyInstanceUID={this.props.params.studyInstanceUID ?? ''}\n               />,\n      onOk (): void {}\n    })\n  }\n\n  handleDebugButtonClick = (): void => {\n    const errorMsgs: {\n      Authentication: string[]\n      Communication: string[]\n      EncodingDecoding: string[]\n      Visualization: string[]\n    } = {\n      Authentication: [],\n      Communication: [],\n      EncodingDecoding: [],\n      Visualization: []\n    }\n\n    type ObjectKey = keyof typeof errorMsgs\n    const errorNum = this.state.errorObj.length\n\n    if (errorNum > 0) {\n      for (let i = 0; i < errorNum; i++) {\n        const category = this.state.errorCategory[i] as ObjectKey\n        errorMsgs[category].push(`${this.state.errorObj[i].message as string} (Source: ${this.state.errorObj[i].source})`)\n      }\n    }\n\n    const { Panel } = Collapse\n\n    const showErrorCount = (errcount: number): JSX.Element => (\n      <Badge count={errcount} />\n    )\n\n    const showWarningCount = (warncount: number): JSX.Element => (\n      <Badge color='green' count={warncount} />\n    )\n\n    Modal.info({\n      title: 'Debug Information\\n (Check console for more information)',\n      width: 800,\n      content: (\n        <Collapse>\n          <Panel\n            header='Communication Error'\n            key='communicationerror'\n            extra={showErrorCount(errorMsgs.Communication.length)}\n          >\n            <ol>\n              {errorMsgs.Communication.map(e => (\n                <li key={uuidv4()}>{e}</li>\n              ))}\n            </ol>\n          </Panel>\n          <Panel\n            header='Data Encoding/Decoding error'\n            key='encodedecodeerror'\n            extra={showErrorCount(errorMsgs.EncodingDecoding.length)}\n          >\n            <ol>\n              {errorMsgs.EncodingDecoding.map(e => (\n                <li key={uuidv4()}>{e}</li>\n              ))}\n            </ol>\n          </Panel>\n          <Panel\n            header='Visualization error'\n            key='visualizationerror'\n            extra={showErrorCount(errorMsgs.Visualization.length)}\n          >\n            <ol>\n              {errorMsgs.Visualization.map(e => (\n                <li key={uuidv4()}>{e}</li>\n              ))}\n            </ol>\n          </Panel>\n          <Panel\n            header='Authentication error'\n            key='autherror'\n            extra={showErrorCount(errorMsgs.Authentication.length)}\n          >\n            <ol>\n              {errorMsgs.Authentication.map(e => (\n                <li key={uuidv4()}>{e}</li>\n              ))}\n            </ol>\n          </Panel>\n          <Panel\n            header='Warning'\n            key='warning'\n            extra={showWarningCount(this.state.warnings.length)}\n          >\n            <ol>\n              {this.state.warnings.map(warning => (\n                <li key={uuidv4()}>{warning}</li>\n              ))}\n            </ol>\n          </Panel>\n        </Collapse>\n      ),\n      onOk (): void {}\n    })\n  }\n\n  handleServerSelectionButtonClick = (): void => {\n    this.setState({ isServerSelectionModalVisible: true })\n  }\n\n  render (): React.ReactNode {\n    let user = null\n    if (this.props.user !== undefined) {\n      const userMenuItems = []\n      if (this.props.onUserLogout !== undefined) {\n        userMenuItems.push(\n          {\n            label: 'Logout',\n            key: 'user-logout',\n            onClick: () => {\n              if (this.props.onUserLogout !== undefined) {\n                this.props.onUserLogout()\n              }\n            }\n          }\n        )\n      }\n      const userMenu = { items: userMenuItems }\n      user = (\n        <Dropdown menu={userMenu} trigger={['click']}>\n          <Button\n            icon={UserOutlined}\n            onClick={e => e.preventDefault()}\n            label={`${this.props.user.name} (${this.props.user.email})`}\n          />\n        </Dropdown>\n      )\n    }\n\n    let worklistButton\n    if (this.props.showWorklistButton) {\n      worklistButton = (\n        <NavLink to='/'>\n          <Button icon={UnorderedListOutlined} tooltip='Go to worklist' />\n        </NavLink>\n      )\n    }\n\n    const infoButton = (\n      <Button\n        icon={InfoOutlined}\n        tooltip='Get app info'\n        onClick={this.handleInfoButtonClick}\n      />\n    )\n\n    const debugButton = (\n      <Badge count={this.state.errorObj.length}>\n        <Badge color='green' count={this.state.warnings.length}>\n          <Button\n            icon={SettingOutlined}\n            tooltip='Debug info'\n            onClick={this.handleDebugButtonClick}\n          />\n        </Badge>\n      </Badge>\n    )\n\n    const showDicomTagBrowser = this.props.location.pathname.includes('/studies/')\n\n    const dicomTagBrowserButton = showDicomTagBrowser\n      ? (\n        <Button\n          icon={FileSearchOutlined}\n          tooltip='Dicom Tag Browser'\n          onClick={this.handleDicomTagBrowserButtonClick}\n        />\n        )\n      : null\n\n    let serverSelectionButton\n    if (this.props.showServerSelectionButton) {\n      serverSelectionButton = (\n        <Button\n          icon={ApiOutlined}\n          tooltip='Select server'\n          onClick={this.handleServerSelectionButtonClick}\n        />\n      )\n    }\n\n    const handleServerSelectionInput = (\n      event: React.FormEvent<HTMLInputElement>\n    ): void => {\n      const value = event.currentTarget.value\n      let isDisabled = true\n      if (value != null) {\n        try {\n          const url = new URL(value)\n          if (url.protocol.startsWith('http') && url.pathname.length > 0) {\n            isDisabled = false\n          }\n        } catch (TypeError) {}\n      }\n      this.setState({\n        selectedServerUrl: value,\n        isServerSelectionDisabled: isDisabled\n      })\n    }\n\n    const handleServerSelectionCancellation = (): void => {\n      this.setState({\n        selectedServerUrl: undefined,\n        isServerSelectionModalVisible: false,\n        isServerSelectionDisabled: true\n      })\n    }\n\n    const handleServerSelection = (): void => {\n      const url = this.state.selectedServerUrl\n      let closeModal = false\n      if (url != null && url !== '') {\n        if (url.startsWith('http://') || url.startsWith('https://')) {\n          this.props.onServerSelection({ url })\n          closeModal = true\n        }\n      }\n      this.setState({\n        selectedServerUrl: undefined,\n        isServerSelectionModalVisible: !closeModal,\n        isServerSelectionDisabled: true\n      })\n    }\n\n    const logoUrl = process.env.PUBLIC_URL + '/logo.svg'\n\n    return (\n      <>\n        <Layout.Header style={{ width: '100%', padding: '0 14px' }}>\n          <Row>\n            <Col>\n              <Space align='center' direction='horizontal'>\n                <img\n                  src={logoUrl}\n                  alt=''\n                  style={{ height: '64px', margin: '-14px' }}\n                />\n              </Space>\n            </Col>\n            <Col flex='auto' />\n            <Col>\n              <Space direction='horizontal'>\n                {worklistButton}\n                {infoButton}\n                {debugButton}\n                {dicomTagBrowserButton}\n                {serverSelectionButton}\n                {user}\n              </Space>\n            </Col>\n          </Row>\n        </Layout.Header>\n\n        <Modal\n          open={this.state.isServerSelectionModalVisible}\n          title='Select DICOMweb server'\n          onOk={handleServerSelection}\n          onCancel={handleServerSelectionCancellation}\n        >\n          <Input\n            placeholder='Enter base URL of DICOMweb Study Service'\n            onChange={handleServerSelectionInput}\n            onPressEnter={handleServerSelection}\n            addonAfter={\n              this.state.isServerSelectionDisabled\n                ? <StopOutlined style={{ color: 'rgba(0,0,0,.45)' }} />\n                : <CheckOutlined style={{ color: 'rgba(0,0,0,.45)' }} />\n            }\n          />\n        </Modal>\n      </>\n    )\n  }\n}\n\nexport default withRouter(Header)\n","import React from 'react'\nimport { Result } from 'antd'\n\ninterface InfoPageProps {\n  type: string\n  title?: string\n  message?: string\n}\n\nconst InfoPage = ({ title, message }: InfoPageProps): JSX.Element => {\n  return (\n    <div style={{\n      height: '100vh',\n      display: 'flex',\n      alignItems: 'center',\n      justifyContent: 'center'\n    }}\n    >\n      <Result\n        title={title}\n        subTitle={message}\n      />\n    </div>\n  )\n}\n\nexport default InfoPage\n","import React from 'react'\nimport { Button, Input, Space, Table, TablePaginationConfig } from 'antd'\nimport { ColumnsType } from 'antd/es/table'\nimport { FilterConfirmProps } from 'antd/es/table/interface'\nimport { SearchOutlined } from '@ant-design/icons'\nimport DicomWebManager from '../DicomWebManager'\n\nimport * as dmv from 'dicom-microscopy-viewer'\n\nimport { StorageClasses } from '../data/uids'\nimport { withRouter, RouteComponentProps } from '../utils/router'\nimport { parseDate, parseName, parseSex, parseTime } from '../utils/values'\nimport { CustomError, errorTypes } from '../utils/CustomError'\nimport NotificationMiddleware, {\n  NotificationMiddlewareContext\n} from '../services/NotificationMiddleware'\n\ninterface WorklistProps extends RouteComponentProps {\n  clients: { [key: string]: DicomWebManager }\n}\n\ninterface WorklistState {\n  studies: dmv.metadata.Study[]\n  isLoading: boolean\n  numStudies: number\n  pageSize: number\n}\n\nclass Worklist extends React.Component<WorklistProps, WorklistState> {\n  private readonly defaultPageSize = 20\n\n  constructor (props: WorklistProps) {\n    super(props)\n    this.fetchData = this.fetchData.bind(this)\n    this.handleClick = this.handleClick.bind(this)\n    this.handleChange = this.handleChange.bind(this)\n    this.state = {\n      studies: [],\n      isLoading: false,\n      numStudies: 0,\n      pageSize: this.defaultPageSize\n    }\n  }\n\n  searchForStudies (): void {\n    const queryParams: { [key: string]: any } = { ModalitiesInStudy: 'SM' }\n    const searchOptions = { queryParams }\n    // TODO: retrieve remaining results\n    const client = this.props.clients[\n      StorageClasses.VL_WHOLE_SLIDE_MICROSCOPY_IMAGE\n    ]\n    client.searchForStudies(searchOptions).then((studies) => {\n      this.setState({\n        numStudies: studies.length,\n        studies: studies.slice(0, this.state.pageSize).map(study => {\n          const { dataset } = dmv.metadata.formatMetadata(study)\n          return dataset as dmv.metadata.Study\n        })\n      })\n    })\n      .catch((error) => {\n        console.error(error)\n        // eslint-disable-next-line @typescript-eslint/no-floating-promises\n        NotificationMiddleware.onError(\n          NotificationMiddlewareContext.DICOMWEB,\n          new CustomError(\n            errorTypes.COMMUNICATION,\n            'An error occured. Search for studies failed.'\n          )\n        )\n      })\n  }\n\n  componentDidMount (): void {\n    this.searchForStudies()\n  }\n\n  componentDidUpdate (previousProps: WorklistProps): void {\n    if (this.props.clients !== previousProps.clients) {\n      this.searchForStudies()\n    }\n  }\n\n  handleClick (event: React.SyntheticEvent, study: dmv.metadata.Study): void {\n    this.props.navigate(`/studies/${study.StudyInstanceUID}`)\n  }\n\n  fetchData ({ offset, limit, searchCriteria }: {\n    offset: number\n    limit: number\n    searchCriteria?: { [attribute: string]: string }\n  }): void {\n    const queryParams: { [key: string]: any } = {\n      ModalitiesInStudy: 'SM',\n      offset: offset,\n      limit: limit\n    }\n    if (searchCriteria !== undefined) {\n      for (const key in searchCriteria) {\n        const value = searchCriteria[key]\n        if (key === 'PersonName') {\n          queryParams[key] = `*${value}*`\n        } else {\n          queryParams[key] = value\n        }\n      }\n      queryParams.fuzzymatching = 'true'\n    }\n    const searchOptions = { queryParams }\n    const client = this.props.clients[\n      StorageClasses.VL_WHOLE_SLIDE_MICROSCOPY_IMAGE\n    ]\n    client.searchForStudies(searchOptions).then((studies) => {\n      this.setState({\n        studies: studies.map(study => {\n          const { dataset } = dmv.metadata.formatMetadata(study)\n          return dataset as dmv.metadata.Study\n        })\n      })\n    })\n      .catch((error) => {\n        console.error(error)\n        NotificationMiddleware.onError(\n          NotificationMiddlewareContext.DICOMWEB,\n          new CustomError(\n            errorTypes.COMMUNICATION,\n            'Request to search for studies failed.'\n          )\n        )\n      })\n  }\n\n  handleChange (\n    pagination: TablePaginationConfig,\n    filters: any\n  ): void {\n    this.setState({ isLoading: true })\n    let index = pagination.current\n    if (index === undefined) {\n      index = 1\n    }\n    let pageSize = pagination.pageSize\n    if (pageSize === undefined) {\n      pageSize = this.state.pageSize\n    }\n    const offset = pageSize * (index - 1)\n    const limit = pageSize\n    console.debug(`search for studies of page #${index}...`)\n    const searchCriteria: { [attribute: string]: string } = {}\n    for (const dataIndex in filters) {\n      if (filters[dataIndex] !== null) {\n        searchCriteria[dataIndex] = filters[dataIndex][0].toString()\n      }\n    }\n    this.fetchData({ offset, limit, searchCriteria })\n    this.setState({ isLoading: false, pageSize: pageSize })\n  }\n\n  handleSearch = (\n    selectedKeys: React.Key[],\n    confirm: (params?: FilterConfirmProps) => void,\n    dataIndex: string\n  ): void => {\n    confirm()\n  }\n\n  handleReset = (clearFilters: () => void): void => {\n    clearFilters()\n  }\n\n  render (): React.ReactNode {\n    const columns: ColumnsType<dmv.metadata.Study> = [\n      {\n        title: 'Accession Number',\n        dataIndex: 'AccessionNumber',\n        ...this.getColumnSearchProps('AccessionNumber')\n      },\n      {\n        title: 'Study ID',\n        dataIndex: 'StudyID',\n        ...this.getColumnSearchProps('StudyID')\n      },\n      {\n        title: 'Study Date',\n        dataIndex: 'StudyDate',\n        render: (value: string): string => parseDate(value)\n      },\n      {\n        title: 'Study Time',\n        dataIndex: 'StudyTime',\n        render: (value: string): string => parseTime(value)\n      },\n      {\n        title: 'Patient ID',\n        dataIndex: 'PatientID',\n        ...this.getColumnSearchProps('PatientID')\n      },\n      {\n        title: \"Patient's Name\",\n        dataIndex: 'PatientName',\n        render: (value: dmv.metadata.PersonName): string => parseName(value),\n        ...this.getColumnSearchProps('PatientName')\n      },\n      {\n        title: \"Patient's Sex\",\n        dataIndex: 'PatientSex',\n        render: (value: string): string => parseSex(value)\n      },\n      {\n        title: \"Patient's Birthdate\",\n        dataIndex: 'PatientBirthDate',\n        render: (value: string): string => parseDate(value)\n      },\n      {\n        title: \"Referring Physician's Name\",\n        dataIndex: 'ReferringPhysicianName',\n        render: (value: dmv.metadata.PersonName): string => parseName(value)\n      },\n      {\n        title: 'Modalities in Study',\n        dataIndex: 'ModalitiesInStudy',\n        render: (value: string[] | string): string => {\n          if (value === undefined) {\n            /*\n             * This should not happen, since the attribute is required.\n             * However, some origin servers don't include it.\n             */\n            return ''\n          } else {\n            return String(value)\n          }\n        }\n      }\n    ]\n\n    const pagination = {\n      defaultPageSize: this.defaultPageSize,\n      pageSize: this.state.pageSize,\n      hideOnSinglePage: true,\n      showSizeChanger: true,\n      showQuickJumper: true,\n      showTotal: (total: number, range: number[]) => {\n        return `${range[0]}-${range[1]} of ${total} studies`\n      },\n      total: this.state.numStudies\n    }\n\n    return (\n      <Table<dmv.metadata.Study>\n        style={{ cursor: 'pointer' }}\n        columns={columns}\n        rowKey={record => record.StudyInstanceUID}\n        dataSource={this.state.studies}\n        pagination={pagination}\n        onRow={(record: dmv.metadata.Study): object => {\n          return {\n            onClick: (event: React.SyntheticEvent): void => {\n              return this.handleClick(event, record)\n            }\n          }\n        }}\n        onChange={this.handleChange}\n        size='small'\n        loading={this.state.isLoading}\n      />\n    )\n  }\n\n  getColumnSearchProps = (dataIndex: string): object => ({\n    filterDropdown: ({ setSelectedKeys, selectedKeys, confirm, clearFilters }: {\n      setSelectedKeys: (selectedKeys: React.Key[]) => void\n      selectedKeys: React.Key[]\n      confirm: (params?: FilterConfirmProps) => void\n      clearFilters: () => void\n    }) => (\n      <div style={{ padding: 8 }}>\n        <Input\n          placeholder='Search'\n          value={selectedKeys[0]}\n          onChange={e => setSelectedKeys(\n            e.target.value !== undefined ? [e.target.value] : []\n          )}\n          onPressEnter={() => this.handleSearch(selectedKeys, confirm, dataIndex)}\n          style={{ width: 188, marginBottom: 8, display: 'block' }}\n        />\n        <Space>\n          <Button\n            type='primary'\n            onClick={() => this.handleSearch(selectedKeys, confirm, dataIndex)}\n            icon={<SearchOutlined />}\n            size='small'\n            style={{ width: 90 }}\n          >\n            Search\n          </Button>\n          <Button\n            onClick={() => this.handleReset(clearFilters)}\n            size='small'\n            style={{ width: 90 }}\n          >\n            Reset\n          </Button>\n        </Space>\n      </div>\n    ),\n    filterIcon: (filtered: boolean) => (\n      <SearchOutlined\n        style={{ color: filtered ? '#1890ff' : undefined }}\n      />\n    )\n  })\n}\n\nexport default withRouter(Worklist)\n","/**\n * Join a URI with a path to form a full URL.\n *\n * @param path - Path component\n * @param uri - Base URI to which the path component should be added\n */\nexport const joinUrl = (path: string, uri: string): string => {\n  let baseUri = uri\n  if (!baseUri.endsWith('/')) {\n    baseUri += '/'\n  }\n  const url = new URL(path, baseUri)\n  return url.toString()\n}\n\n/**\n * Check whether a URL contains an OAuth 2.0 authorization code.\n *\n * @param location - URL components (JavaScript location object)\n * @returns Whether the URL contains a code\n */\nexport const isAuthorizationCodeInUrl = (location: {\n  search: string\n  hash: string\n}): boolean => {\n  const searchParams = new URLSearchParams(location.search)\n  const hashParams = new URLSearchParams(location.hash.replace('#', '?'))\n\n  return Boolean(\n    searchParams.get('code') ??\n    searchParams.get('id_token') ??\n    searchParams.get('session_state') ??\n    hashParams.get('code') ??\n    hashParams.get('id_token') ??\n    hashParams.get('session_state')\n  )\n}\n","import { UserManager, User as UserData } from 'oidc-client'\n\nimport { OidcSettings } from '../AppConfig'\nimport { isAuthorizationCodeInUrl } from '../utils/url'\nimport { User, AuthManager, SignInCallback } from './'\nimport NotificationMiddleware,\n{ NotificationMiddlewareContext } from '../services/NotificationMiddleware'\nimport { CustomError, errorTypes } from '../utils/CustomError'\n\nconst createUser = (userData: UserData | null): User => {\n  let profile\n  if (userData !== null) {\n    profile = userData.profile\n  }\n\n  if (profile !== undefined) {\n    if (profile.name === undefined || profile.email === undefined) {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.AUTH,\n        new CustomError(\n          errorTypes.AUTHENTICATION,\n          'Failed to obtain user \"name\" and \"email\".'\n        )\n      )\n    } else {\n      return {\n        name: profile.name,\n        email: profile.email\n      }\n    }\n  } else {\n    NotificationMiddleware.onError(\n      NotificationMiddlewareContext.AUTH,\n      new CustomError(\n        errorTypes.AUTHENTICATION,\n        'Failed to obtain user profile.'\n      )\n    )\n  }\n  return {\n    name: undefined,\n    email: undefined\n  }\n}\n\nexport default class OidcManager implements AuthManager {\n  private _oidc: UserManager\n\n  constructor (baseUri: string, settings: OidcSettings) {\n    let responseType = 'code'\n    if (settings.grantType !== undefined) {\n      if (settings.grantType === 'implicit') {\n        responseType = 'id_token token'\n      }\n    }\n    this._oidc = new UserManager({\n      authority: settings.authority,\n      client_id: settings.clientId,\n      redirect_uri: baseUri,\n      scope: settings.scope,\n      response_type: responseType,\n      loadUserInfo: true,\n      automaticSilentRenew: true,\n      revokeAccessTokenOnSignout: true,\n      post_logout_redirect_uri: `${baseUri}/logout`\n    })\n    if (settings.endSessionEndpoint != null) {\n      /*\n       * Unfortunately, the end session endpoint alone cannot be provided to\n       * the construction of UserManager and the other metadata parameters\n       * would need to be provided as well. However, configuring all of them\n       * individually would not be desirable and they will be automatically\n       * determined anyways. Therefore, we first construct an object, get the\n       * metadata, update the metadata, and then reconstruct an object with the\n       * updated metadata.\n       */\n      this._oidc.metadataService.getMetadata().then(metadata => {\n        if (settings.endSessionEndpoint != null) {\n          metadata.end_session_endpoint = settings.endSessionEndpoint\n          this._oidc = new UserManager({\n            authority: settings.authority,\n            client_id: settings.clientId,\n            redirect_uri: baseUri,\n            scope: settings.scope,\n            response_type: responseType,\n            loadUserInfo: true,\n            automaticSilentRenew: true,\n            revokeAccessTokenOnSignout: true,\n            post_logout_redirect_uri: `${baseUri}/logout`,\n            metadata\n          })\n        }\n      }).catch((error) => {\n        console.error(\n          'failed to get metadata from authorization server: ',\n          error\n        )\n      })\n    }\n  }\n\n  /**\n   * Sign-in to authenticate the user and obtain authorization.\n   */\n  signIn = async ({ onSignIn }: {\n    onSignIn?: SignInCallback\n  }): Promise<void> => {\n    const handleSignIn = (userData: UserData): void => {\n      const user = createUser(userData)\n      const authorization = `${userData.token_type} ${userData.access_token}`\n      if (onSignIn != null) {\n        console.info('handling sign-in using provided callback function')\n        onSignIn({ user: user, authorization: authorization })\n      } else {\n        console.warn('no callback function was provided to handle sign-in')\n      }\n    }\n\n    if (isAuthorizationCodeInUrl(window.location)) {\n      /* Handle the callback from the authorization server: extract the code\n       * from the callback URL, obtain user information and the access token\n       * for the DICOMweb server.\n       */\n      console.info('obtaining authorization')\n      const userData = await this._oidc.signinCallback()\n      if (userData != null) {\n        console.info('obtained user data: ', userData)\n        handleSignIn(userData)\n      }\n    } else {\n      /* Redirect to the authorization server to authenticate the user\n       * and authorize the application to obtain user information and access\n       * the DICOMweb server.\n       */\n      const userData = await this._oidc.getUser()\n      if (userData === null || userData.expired) {\n        console.info('authenticating user')\n        await this._oidc.signinRedirect()\n      } else {\n        console.info('user has already been authenticated')\n        handleSignIn(userData)\n      }\n    }\n  }\n\n  /**\n   * Sign-out to revoke authorization.\n   */\n  signOut = async (): Promise<void> => {\n    console.log('signing out user and revoking authorization')\n    return await this._oidc.signoutRedirect()\n  }\n\n  /**\n   * Get authorization. Requires prior sign-in.\n   */\n  getAuthorization = async (): Promise<string|undefined> => {\n    return await this._oidc.getUser().then((userData) => {\n      if (userData !== null) {\n        return userData.access_token\n      } else {\n        NotificationMiddleware.onError(\n          NotificationMiddlewareContext.AUTH,\n          new CustomError(\n            errorTypes.AUTHENTICATION,\n            'Failed to obtain user profile.'\n          )\n        )\n      }\n    })\n  }\n\n  /**\n   * Get user information. Requires prior sign-in.\n   */\n  getUser = async (): Promise<User> => {\n    return await this._oidc.getUser().then((userData) => {\n      if (userData === null) {\n        NotificationMiddleware.onError(\n          NotificationMiddlewareContext.AUTH,\n          new CustomError(\n            errorTypes.AUTHENTICATION,\n            'Failed to obtain user information.'\n          )\n        )\n      }\n      return createUser(userData)\n    })\n  }\n}\n","import retry from 'retry'\n\nimport {\n  RetryRequestSettings,\n  DICOMwebClientRequestHookMetadata\n} from '../AppConfig'\n\ntype RequestHook = (\n  request: XMLHttpRequest,\n  metadata: DICOMwebClientRequestHookMetadata\n) => XMLHttpRequest\n\n/**\n * Returns a configured retry request hook function\n * that can be used to add retry functionality to XHR request.\n *\n * Default options:\n *   retries: 5\n *   factor: 3\n *   minTimeout: 1 * 1000\n *   maxTimeout: 60 * 1000\n *   randomize: true\n *\n * @param options\n * @param options.retires - Number of retries\n * @param options.factor - Factor\n * @param options.minTimeout - Min number of seconds to wait before next retry\n * @param options.maxTimeout - Max number of seconds to wait before next retry\n * @param options.randomize - Whether randomization should be applied\n * @param options.retryableStatusCodes HTTP status codes that can trigger a retry\n * @returns Configured retry request function\n */\nexport const getXHRRetryHook = (options: RetryRequestSettings = {\n  retries: 5,\n  factor: 3,\n  minTimeout: 1 * 1000,\n  maxTimeout: 60 * 1000,\n  randomize: true,\n  retryableStatusCodes: [429, 500]\n}): RequestHook => {\n  const retryOptions = options\n\n  if (options.retries != null) {\n    retryOptions.retries = options.retries\n  }\n\n  if (options.factor != null) {\n    retryOptions.factor = options.factor\n  }\n\n  if (options.minTimeout != null) {\n    retryOptions.minTimeout = options.minTimeout\n  }\n\n  if (options.maxTimeout != null) {\n    retryOptions.maxTimeout = options.maxTimeout\n  }\n\n  if (options.randomize != null) {\n    retryOptions.randomize = options.randomize\n  }\n\n  if (options.retryableStatusCodes != null) {\n    retryOptions.retryableStatusCodes = options.retryableStatusCodes\n  }\n\n  /**\n   * Request hook used to add retry functionality to XHR requests.\n   *\n   * @param request - XHR request instance\n   * @param metadata - Metadata about the request\n   * @param metadata.url - URL\n   * @param metadata.method - HTTP method\n   * @returns - XHR request instance (potentially modified)\n   */\n  const xhrRetryHook = (\n    request: XMLHttpRequest,\n    metadata: DICOMwebClientRequestHookMetadata\n  ): XMLHttpRequest => {\n    const { url, method } = metadata\n\n    function faultTolerantRequestSend (...args: any): void {\n      const operation = retry.operation(retryOptions)\n\n      operation.attempt(function operationAttempt (currentAttempt) {\n        const originalOnReadyStateChange = request.onreadystatechange\n\n        /** Overriding/extending XHR function */\n        request.onreadystatechange = function onReadyStateChange (...args: any): void {\n          if (originalOnReadyStateChange != null) {\n            originalOnReadyStateChange.apply(request, args)\n          }\n\n          if (retryOptions.retryableStatusCodes.includes(request.status)) {\n            const errorMessage = `Attempt to request ${url} failed.`\n            const attemptFailedError = new Error(errorMessage)\n            operation.retry(attemptFailedError)\n          }\n        }\n\n        /** Call open only on retry (after headers and other things were set in the xhr instance) */\n        if (currentAttempt > 1) {\n          console.warn(`Requesting ${url}... (attempt: ${currentAttempt})`)\n          request.open(method, url, true)\n        }\n      })\n\n      originalRequestSend.apply(request, args)\n    }\n\n    /** Overriding/extending XHR function */\n    const originalRequestSend = request.send\n    request.send = faultTolerantRequestSend\n\n    return request\n  }\n\n  return xhrRetryHook\n}\n\nexport default getXHRRetryHook\n","import * as dwc from 'dicomweb-client'\nimport * as dcmjs from 'dcmjs'\nimport * as dmv from 'dicom-microscopy-viewer'\n\nimport { ServerSettings, DicomWebManagerErrorHandler } from './AppConfig'\nimport { joinUrl } from './utils/url'\nimport getXHRRetryHook from './utils/xhrRetryHook'\nimport { CustomError, errorTypes } from './utils/CustomError'\nimport NotificationMiddleware, {\n  NotificationMiddlewareContext\n} from './services/NotificationMiddleware'\nimport DicomMetadataStore, { Instance } from './services/DICOMMetadataStore'\n\nconst { naturalizeDataset } = dcmjs.data.DicomMetaDictionary\n\ninterface Store {\n  id: string\n  read: boolean\n  write: boolean\n  client: dwc.api.DICOMwebClient\n}\n\nexport default class DicomWebManager implements dwc.api.DICOMwebClient {\n  private readonly stores: Store[] = []\n\n  private readonly handleError: DicomWebManagerErrorHandler\n\n  constructor ({ baseUri, settings, onError }: {\n    baseUri: string\n    settings: ServerSettings[]\n    onError?: DicomWebManagerErrorHandler\n  }) {\n    if (onError != null) {\n      this.handleError = onError\n    } else {\n      this.handleError = (error, serverSettings) => {\n        console.error(error, serverSettings)\n      }\n    }\n\n    settings.forEach(serverSettings => {\n      if (serverSettings === undefined) {\n        NotificationMiddleware.onError(\n          NotificationMiddlewareContext.SLIM,\n          new CustomError(\n            errorTypes.COMMUNICATION,\n            'At least one server needs to be configured.'\n          )\n        )\n      }\n\n      let serviceUrl\n      if (serverSettings.url !== undefined) {\n        serviceUrl = serverSettings.url\n      } else if (serverSettings.path !== undefined) {\n        serviceUrl = joinUrl(serverSettings.path, baseUri)\n      } else {\n        NotificationMiddleware.onError(\n          NotificationMiddlewareContext.SLIM,\n          new CustomError(\n            errorTypes.COMMUNICATION,\n            'Either path or full URL needs to be configured for server.'\n          )\n        )\n      }\n\n      const hasHttpsUrl = (url?: string): boolean => url?.startsWith('https') ?? false\n\n      const clientSettings: dwc.api.DICOMwebClientOptions = {\n        url: serviceUrl\n      }\n\n      const shouldUpgradeInsecure = serverSettings.upgradeInsecureRequests === true && [\n        serviceUrl,\n        serverSettings.qidoPathPrefix,\n        serverSettings.wadoPathPrefix,\n        serverSettings.stowPathPrefix\n      ].some(hasHttpsUrl)\n\n      if (serverSettings.qidoPathPrefix !== undefined) {\n        clientSettings.qidoURLPrefix = serverSettings.qidoPathPrefix\n      }\n      if (serverSettings.wadoPathPrefix !== undefined) {\n        clientSettings.wadoURLPrefix = serverSettings.wadoPathPrefix\n      }\n      if (serverSettings.stowPathPrefix !== undefined) {\n        clientSettings.stowURLPrefix = serverSettings.stowPathPrefix\n      }\n\n      if (shouldUpgradeInsecure) {\n        clientSettings.headers = {\n          ...clientSettings.headers,\n          'Content-Security-Policy': 'upgrade-insecure-requests'\n        }\n      }\n\n      if (serverSettings.retry !== undefined) {\n        clientSettings.requestHooks = [getXHRRetryHook(serverSettings.retry)]\n      }\n\n      clientSettings.errorInterceptor = (error: dwc.api.DICOMwebClientError) => {\n        this.handleError(error, serverSettings)\n      }\n\n      this.stores.push({\n        id: serverSettings.id,\n        write: serverSettings.write ?? false,\n        read: serverSettings.read ?? true,\n        client: new dwc.api.DICOMwebClient(clientSettings)\n      })\n    })\n\n    if (this.stores.length > 1) {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.COMMUNICATION,\n          'Only one store is supported for now.'\n        )\n      )\n    }\n  }\n\n  get baseURL (): string {\n    return this.stores[0].client.baseURL\n  }\n\n  updateHeaders = (fields: { [name: string]: string }): void => {\n    for (const f in fields) {\n      this.stores[0].client.headers[f] = fields[f]\n    }\n  }\n\n  get headers (): { [name: string]: string } {\n    return this.stores[0].client.headers\n  }\n\n  storeInstances = async (\n    options: dwc.api.StoreInstancesOptions\n  ): Promise<void> => {\n    if (this.stores[0].write) {\n      return await this.stores[0].client.storeInstances(options)\n    } else {\n      return await Promise.reject(\n        new Error('Store is not writable.')\n      )\n    }\n  }\n\n  searchForStudies = async (\n    options: dwc.api.SearchForStudiesOptions\n  ): Promise<dwc.api.Study[]> => {\n    return await this.stores[0].client.searchForStudies(options)\n  }\n\n  searchForSeries = async (\n    options: dwc.api.SearchForSeriesOptions\n  ): Promise<dwc.api.Series[]> => {\n    return await this.stores[0].client.searchForSeries(options)\n  }\n\n  searchForInstances = async (\n    options: dwc.api.SearchForInstancesOptions\n  ): Promise<dwc.api.Instance[]> => {\n    return await this.stores[0].client.searchForInstances(options)\n  }\n\n  retrieveStudyMetadata = async (\n    options: dwc.api.RetrieveStudyMetadataOptions\n  ): Promise<dwc.api.Metadata[]> => {\n    const studySummaryMetadata = await this.stores[0].client.retrieveStudyMetadata(options)\n    const naturalized = naturalizeDataset(studySummaryMetadata)\n    DicomMetadataStore.addStudy(naturalized)\n    return studySummaryMetadata\n  }\n\n  retrieveSeriesMetadata = async (\n    options: dwc.api.RetrieveSeriesMetadataOptions\n  ): Promise<dwc.api.Metadata[]> => {\n    const seriesSummaryMetadata = await this.stores[0].client.retrieveSeriesMetadata(options)\n    console.debug('seriesSummaryMetadata:', seriesSummaryMetadata)\n    const naturalized = seriesSummaryMetadata.map(naturalizeDataset)\n    console.debug('naturalized:', naturalized)\n    DicomMetadataStore.addSeriesMetadata(naturalized, true)\n    return seriesSummaryMetadata\n  }\n\n  retrieveInstanceMetadata = async (\n    options: dwc.api.RetrieveInstanceMetadataOptions\n  ): Promise<dwc.api.Metadata[]> => {\n    return await this.stores[0].client.retrieveInstanceMetadata(options)\n  }\n\n  retrieveInstance = async (\n    options: dwc.api.RetrieveInstanceOptions\n  ): Promise<dwc.api.Dataset> => {\n    const instance = await this.stores[0].client.retrieveInstance(options)\n    const data = dcmjs.data.DicomMessage.readFile(instance)\n    const { dataset } = dmv.metadata.formatMetadata(data.dict)\n    DicomMetadataStore.addInstances([dataset as Instance])\n    return instance\n  }\n\n  retrieveInstanceFrames = async (\n    options: dwc.api.RetrieveInstanceFramesOptions\n  ): Promise<dwc.api.Pixeldata[]> => {\n    return await this.stores[0].client.retrieveInstanceFrames(options)\n  }\n\n  retrieveInstanceRendered = async (\n    options: dwc.api.RetrieveInstanceRenderedOptions\n  ): Promise<dwc.api.Pixeldata> => {\n    return await this.stores[0].client.retrieveInstanceRendered(options)\n  }\n\n  retrieveInstanceFramesRendered = async (\n    options: dwc.api.RetrieveInstanceFramesRenderedOptions\n  ): Promise<dwc.api.Pixeldata> => {\n    return await this.stores[0].client.retrieveInstanceFramesRendered(options)\n  }\n\n  retrieveBulkData = async (\n    options: dwc.api.RetrieveBulkDataOptions\n  ): Promise<dwc.api.Bulkdata[]> => {\n    return await this.stores[0].client.retrieveBulkData(options)\n  }\n}\n","import React from 'react'\nimport {\n  BrowserRouter,\n  Navigate,\n  Route,\n  Routes,\n  useParams\n} from 'react-router-dom'\nimport { Layout, message } from 'antd'\nimport { FaSpinner } from 'react-icons/fa'\nimport * as dwc from 'dicomweb-client'\n\nimport AppConfig, { ServerSettings, ErrorMessageSettings } from './AppConfig'\nimport CaseViewer from './components/CaseViewer'\nimport Header from './components/Header'\nimport InfoPage from './components/InfoPage'\nimport Worklist from './components/Worklist'\n\nimport { User, AuthManager } from './auth'\nimport OidcManager from './auth/OidcManager'\nimport { StorageClasses } from './data/uids'\nimport DicomWebManager from './DicomWebManager'\nimport { joinUrl } from './utils/url'\nimport { CustomError, errorTypes } from './utils/CustomError'\nimport NotificationMiddleware, {\n  NotificationMiddlewareContext\n} from './services/NotificationMiddleware'\n\nfunction ParametrizedCaseViewer ({ clients, user, app, config }: {\n  clients: { [key: string]: DicomWebManager }\n  user?: User\n  app: {\n    name: string\n    version: string\n    uid: string\n    organization?: string\n  }\n  config: AppConfig\n}): JSX.Element {\n  const { studyInstanceUID } = useParams()\n\n  const enableAnnotationTools = !(config.disableAnnotationTools ?? false)\n  const preload = config.preload ?? false\n  return (\n    <CaseViewer\n      clients={clients}\n      user={user}\n      annotations={config.annotations}\n      preload={preload}\n      app={app}\n      enableAnnotationTools={enableAnnotationTools}\n      studyInstanceUID={studyInstanceUID}\n    />\n  )\n}\n\nfunction _createClientMapping ({ baseUri, gcpBaseUrl, settings, onError }: {\n  baseUri: string\n  gcpBaseUrl: string\n  settings: ServerSettings[]\n  onError: (\n    error: dwc.api.DICOMwebClientError,\n    serverSettings: ServerSettings\n  ) => void\n}): { [sopClassUID: string]: DicomWebManager } {\n  const storageClassMapping: { [key: string]: number } = { default: 0 }\n  const clientMapping: { [sopClassUID: string]: DicomWebManager } = {}\n\n  settings.forEach(serverSettings => {\n    if (serverSettings.storageClasses != null) {\n      serverSettings.storageClasses.forEach(sopClassUID => {\n        if (Object.values<string>(StorageClasses).includes(sopClassUID)) {\n          if (sopClassUID in storageClassMapping) {\n            storageClassMapping[sopClassUID] += 1\n          } else {\n            storageClassMapping[sopClassUID] = 1\n          }\n        } else {\n          console.warn(\n            `unknown storage class \"${sopClassUID}\" specified ` +\n            `for configured server \"${serverSettings.id}\"`\n          )\n        }\n      })\n    } else {\n      if (window.location.pathname.includes('/projects/')) {\n        const pathname = window.location.pathname.split('/study/')[0]\n        const pathUrl = `${gcpBaseUrl}${pathname}/dicomWeb`\n        serverSettings.url = pathUrl\n      }\n\n      storageClassMapping.default += 1\n      clientMapping.default = new DicomWebManager({\n        baseUri,\n        settings: [serverSettings],\n        onError\n      })\n    }\n  })\n\n  if (storageClassMapping.default > 1) {\n    NotificationMiddleware.onError(\n      NotificationMiddlewareContext.SLIM,\n      new CustomError(\n        errorTypes.COMMUNICATION,\n        'Only one default server can be configured without specification ' +\n        'of storage classes.'\n      )\n    )\n  }\n\n  for (const key in storageClassMapping) {\n    if (key === 'default') {\n      continue\n    }\n    if (storageClassMapping[key] > 1) {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.COMMUNICATION,\n          'Only one configured server can specify a given storage class. ' +\n          `Storage class \"${key}\" is specified by more than one ` +\n          'of the configured servers.'\n        )\n      )\n    }\n  }\n\n  if (Object.keys(storageClassMapping).length > 1) {\n    settings.forEach(server => {\n      const client = new DicomWebManager({\n        baseUri,\n        settings: [server],\n        onError\n      })\n      if (server.storageClasses != null) {\n        server.storageClasses.forEach(sopClassUID => {\n          clientMapping[sopClassUID] = client\n        })\n      }\n    })\n  }\n\n  Object.values(StorageClasses).forEach(sopClassUID => {\n    if (!(sopClassUID in clientMapping)) {\n      clientMapping[sopClassUID] = clientMapping.default\n    }\n  })\n  return clientMapping\n}\n\ninterface AppProps {\n  name: string\n  homepage: string\n  version: string\n  config: AppConfig\n}\n\ninterface AppState {\n  clients: { [sopClassUID: string]: DicomWebManager }\n  user?: User\n  isLoading: boolean\n  redirectTo?: string\n  wasAuthSuccessful: boolean\n  error?: ErrorMessageSettings\n}\n\nclass App extends React.Component<AppProps, AppState> {\n  private readonly auth?: AuthManager\n\n  private readonly handleDICOMwebError = (\n    error: dwc.api.DICOMwebClientError,\n    serverSettings: ServerSettings\n  ): void => {\n    if (error.status === 401) {\n      this.signIn()\n    } else if (error.status === 403) {\n      // eslint-disable-next-line @typescript-eslint/no-floating-promises\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.DICOMWEB,\n        new CustomError(\n          errorTypes.COMMUNICATION,\n          'User is not authorized to access DICOMweb resources.')\n      )\n    }\n\n    const logServerError = (): void => {\n      // eslint-disable-next-line @typescript-eslint/no-floating-promises\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.DICOMWEB,\n        new CustomError(\n          errorTypes.COMMUNICATION,\n          'An unexpected server error occured.'\n        )\n      )\n    }\n\n    if (serverSettings.errorMessages !== undefined) {\n      serverSettings.errorMessages.forEach((setting: ErrorMessageSettings) => {\n        if (error.status === setting.status) {\n          this.setState({\n            error: {\n              status: error.status,\n              message: setting.message\n            }\n          })\n        } else if (error.status === 500) {\n          logServerError()\n        }\n      })\n    } else if (error.status === 500) {\n      logServerError()\n    }\n  }\n\n  constructor (props: AppProps) {\n    super(props)\n\n    console.info('instatiate app')\n    console.info(`app is located at \"${props.config.path}\"`)\n    const { protocol, host } = window.location\n    const baseUri = `${protocol}//${host}`\n    const appUri = joinUrl(props.config.path, baseUri)\n\n    const oidcSettings = props.config.oidc\n    if (oidcSettings !== undefined) {\n      console.info(\n        'app uses the following OIDC configuration: ',\n        props.config.oidc\n      )\n      this.auth = new OidcManager(appUri, oidcSettings)\n    }\n\n    if (props.config.servers.length === 0) {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.COMMUNICATION,\n          'One server needs to be configured.')\n      )\n    }\n    console.info(\n      'app uses the following DICOMweb server configuration: ',\n      props.config.servers\n    )\n\n    this.handleServerSelection = this.handleServerSelection.bind(this)\n\n    message.config({ duration: 5 })\n    this.addGcpSecondaryAnnotationServer(props.config)\n\n    this.state = {\n      clients: _createClientMapping({\n        baseUri,\n        gcpBaseUrl: props.config.gcpBaseUrl ?? 'https://healthcare.googleapis.com/v1',\n        settings: props.config.servers,\n        onError: this.handleDICOMwebError\n      }),\n      isLoading: true,\n      wasAuthSuccessful: false\n    }\n  }\n\n  addGcpSecondaryAnnotationServer (config: AppProps['config']): void {\n    const serverId = 'gcp_secondary_annotation_server'\n    const urlParams = new URLSearchParams(window.location.search)\n    const url = urlParams.get('gcp')\n    const gcpSecondaryAnnotationServer = config.servers.find(\n      (server) => server.id === serverId\n    )\n    if (gcpSecondaryAnnotationServer === undefined && typeof url === 'string') {\n      config.servers.push({\n        id: serverId,\n        write: true,\n        url,\n        storageClasses: [\n          StorageClasses.COMPREHENSIVE_SR,\n          StorageClasses.COMPREHENSIVE_3D_SR,\n          StorageClasses.SEGMENTATION,\n          StorageClasses.MICROSCOPY_BULK_SIMPLE_ANNOTATION,\n          StorageClasses.PARAMETRIC_MAP,\n          StorageClasses.ADVANCED_BLENDING_PRESENTATION_STATE,\n          StorageClasses.COLOR_SOFTCOPY_PRESENTATION_STATE,\n          StorageClasses.GRAYSCALE_SOFTCOPY_PRESENTATION_STATE,\n          StorageClasses.PSEUDOCOLOR_SOFTCOPY_PRESENTATION_STATE\n        ]\n      })\n    }\n  }\n\n  handleServerSelection ({ url }: { url: string }): void {\n    console.info('select DICOMweb server: ', url)\n    const tmpClient = new DicomWebManager({\n      baseUri: '',\n      settings: [{\n        id: 'tmp',\n        url,\n        read: true,\n        write: false\n      }],\n      onError: this.handleDICOMwebError\n    })\n    tmpClient.updateHeaders(this.state.clients.default.headers)\n    /**\n     * Use the newly created client for all storage classes. We may want to\n     * make this more sophisticated in the future to allow users to override\n     * the entire server configuration.\n     */\n    this.setState(state => {\n      const clients: { [key: string]: DicomWebManager } = {}\n      for (const key in state.clients) {\n        clients[key] = tmpClient\n      }\n      return { clients }\n    })\n  }\n\n  /**\n   * Handle successful authentication event.\n   *\n   * Authorizes the DICOMweb client to access the DICOMweb server and directs\n   * the user back to the App.\n   *\n   * @param user - Information about the user\n   * @param authorization - Value of the \"Authorization\" HTTP header field\n   */\n  handleSignIn = ({ user, authorization }: {\n    user: User\n    authorization: string\n  }): void => {\n    for (const key in this.state.clients) {\n      const client = this.state.clients[key]\n      client.updateHeaders({ Authorization: authorization })\n    }\n    const storedPath = window.localStorage.getItem('slim_path')\n    const storedSearch = window.localStorage.getItem('slim_search')\n    if (storedPath != null) {\n      const currentPath = window.location.pathname\n      if (storedPath !== currentPath) {\n        let path = storedPath\n        if (storedSearch != null) {\n          path += storedSearch\n        }\n        window.location.href = path\n      }\n    }\n    window.localStorage.removeItem('slim_path')\n    window.localStorage.removeItem('slim_search')\n    this.setState({ user: user })\n  }\n\n  signIn (): void {\n    if (this.auth !== undefined) {\n      console.info('try to sign in user')\n      this.auth.signIn({ onSignIn: this.handleSignIn }).then(() => {\n        console.info('sign-in was successful')\n        this.setState({\n          isLoading: false,\n          wasAuthSuccessful: true\n        })\n      }).catch((error) => {\n        console.error(error)\n        // eslint-disable-next-line @typescript-eslint/no-floating-promises\n        NotificationMiddleware.onError(\n          NotificationMiddlewareContext.AUTH,\n          new CustomError(\n            errorTypes.AUTHENTICATION,\n            'Could not sign-in user.')\n        )\n        this.setState({\n          isLoading: false,\n          redirectTo: undefined,\n          wasAuthSuccessful: false\n        })\n      })\n    } else {\n      this.setState({\n        isLoading: false,\n        redirectTo: undefined,\n        wasAuthSuccessful: true\n      })\n    }\n  }\n\n  componentDidMount (): void {\n    const path = window.localStorage.getItem('slim_path')\n    if (path == null) {\n      window.localStorage.setItem('slim_path', window.location.pathname)\n      window.localStorage.setItem('slim_search', window.location.search)\n    }\n    this.signIn()\n  }\n\n  render (): React.ReactNode {\n    const appInfo = {\n      name: this.props.name,\n      version: this.props.version,\n      homepage: this.props.homepage,\n      uid: '1.2.826.0.1.3680043.9.7433.1.5',\n      organization: this.props.config.organization\n    }\n\n    const enableWorklist = !(\n      this.props.config.disableWorklist ?? false\n    )\n    const enableServerSelection = (\n      this.props.config.enableServerSelection ?? false\n    )\n\n    let worklist\n    if (enableWorklist) {\n      worklist = <Worklist clients={this.state.clients} />\n    } else {\n      worklist = <div>Worklist has been disabled.</div>\n    }\n\n    let isLogoutPossible = false\n    let onLogout: () => void\n    if (\n      // eslint-disable-next-line @typescript-eslint/prefer-optional-chain\n      this.props.config.oidc != null &&\n      this.props.config.oidc.endSessionEndpoint != null\n    ) {\n      onLogout = (): void => {\n        if (this.auth != null) {\n          // eslint-disable-next-line @typescript-eslint/no-floating-promises\n          this.auth.signOut()\n        }\n      }\n      isLogoutPossible = true\n    } else {\n      onLogout = () => {}\n      isLogoutPossible = false\n    }\n\n    const layoutStyle = { height: '100vh' }\n    const layoutContentStyle = { height: '100%' }\n\n    if (this.state.redirectTo !== undefined) {\n      return (\n        <BrowserRouter basename={this.props.config.path}>\n          <Navigate to={this.state.redirectTo} replace />\n        </BrowserRouter>\n      )\n    } else if (this.state.isLoading) {\n      return (\n        <BrowserRouter basename={this.props.config.path}>\n          <Layout style={layoutStyle}>\n            <Header\n              app={appInfo}\n              user={this.state.user}\n              showWorklistButton={false}\n              onServerSelection={this.handleServerSelection}\n              showServerSelectionButton={false}\n              clients={this.state.clients}\n            />\n            <Layout.Content style={layoutContentStyle}>\n              <FaSpinner />\n            </Layout.Content>\n          </Layout>\n        </BrowserRouter>\n      )\n    } else if (!this.state.wasAuthSuccessful) {\n      return (\n        <InfoPage type='error' message='Sign-in failed.' />\n      )\n    } else if (this.state.error != null) {\n      return (\n        <InfoPage type='error' message={this.state.error.message} />\n      )\n    } else {\n      return (\n        <BrowserRouter basename={this.props.config.path}>\n          <Routes>\n            <Route\n              path='/'\n              element={\n                <Layout style={layoutStyle}>\n                  <Header\n                    app={appInfo}\n                    user={this.state.user}\n                    showWorklistButton={false}\n                    onServerSelection={this.handleServerSelection}\n                    onUserLogout={isLogoutPossible ? onLogout : undefined}\n                    showServerSelectionButton={enableServerSelection}\n                  />\n                  <Layout.Content style={layoutContentStyle}>\n                    {worklist}\n                  </Layout.Content>\n                </Layout>\n              }\n            />\n            <Route\n              path='/studies/:studyInstanceUID/*'\n              element={\n                <Layout style={layoutStyle}>\n                  <Header\n                    app={appInfo}\n                    user={this.state.user}\n                    showWorklistButton={enableWorklist}\n                    onServerSelection={this.handleServerSelection}\n                    onUserLogout={isLogoutPossible ? onLogout : undefined}\n                    showServerSelectionButton={enableServerSelection}\n                  />\n                  <Layout.Content style={layoutContentStyle}>\n                    <ParametrizedCaseViewer\n                      clients={this.state.clients}\n                      user={this.state.user}\n                      config={this.props.config}\n                      app={appInfo}\n                    />\n                  </Layout.Content>\n                </Layout>\n              }\n            />\n            <Route\n              path='/projects/:project/locations/:location/datasets/:dataset/dicomStores/:dicomStore/study/:studyInstanceUID/*'\n              element={\n                <Layout style={layoutStyle}>\n                  <Header\n                    app={appInfo}\n                    user={this.state.user}\n                    showWorklistButton={enableWorklist}\n                    onServerSelection={this.handleServerSelection}\n                    onUserLogout={isLogoutPossible ? onLogout : undefined}\n                    showServerSelectionButton={enableServerSelection}\n                  />\n                  <Layout.Content style={layoutContentStyle}>\n                    <ParametrizedCaseViewer\n                      clients={this.state.clients}\n                      user={this.state.user}\n                      config={this.props.config}\n                      app={appInfo}\n                    />\n                  </Layout.Content>\n                </Layout>\n              }\n            />\n            <Route\n              path='/logout'\n              element={\n                <Layout style={layoutStyle}>\n                  <Header\n                    app={appInfo}\n                    user={this.state.user}\n                    showWorklistButton={false}\n                    onServerSelection={this.handleServerSelection}\n                    onUserLogout={isLogoutPossible ? onLogout : undefined}\n                    showServerSelectionButton={enableServerSelection}\n                  />\n                  Logged out\n                </Layout>\n              }\n            />\n          </Routes>\n        </BrowserRouter>\n      )\n    }\n  }\n}\n\nexport default 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React from 'react'\nimport { v4 as generateUUID } from 'uuid'\nimport { Card, Descriptions } from 'antd'\n\nexport interface Attribute {\n  name: string\n  value: any\n}\n\nexport interface AttributeGroup {\n  name: string\n  attributes: Attribute[]\n}\n\ninterface DescriptionProps {\n  header?: string\n  icon?: any\n  attributes: Attribute[]\n  selectable?: boolean\n  hasLongValues?: boolean\n  methods?: React.ReactNode[]\n  children?: React.ReactNode\n}\n\n/**\n * React component for a description consisting of a header containing a\n * header and a body containing a list of name-value pairs.\n */\nclass Description extends React.Component<DescriptionProps, {}> {\n  render (): React.ReactNode {\n    let layout: 'horizontal' | 'vertical' = 'horizontal'\n    let labelLineHeight = '14px'\n    const contentLineHeight = '14px'\n    if (this.props.hasLongValues !== undefined && this.props.hasLongValues) {\n      layout = 'vertical'\n      labelLineHeight = '20px'\n    }\n    const items = this.props.attributes.map((item: Attribute, index: number) => {\n      const uid = generateUUID()\n      return (\n        <Descriptions.Item\n          key={uid}\n          label={item.name}\n          labelStyle={{\n            lineHeight: labelLineHeight\n          }}\n          contentStyle={{\n            fontWeight: 600,\n            whiteSpace: 'pre-line',\n            lineHeight: contentLineHeight\n          }}\n          span={1}\n        >\n          {item.value}\n        </Descriptions.Item>\n      )\n    })\n    let icon = null\n    if (this.props.icon !== undefined) {\n      icon = <this.props.icon />\n    }\n    return (\n      <Card\n        title={this.props.header}\n        extra={icon}\n        size='small'\n        hoverable={this.props.selectable}\n        bordered={this.props.header !== undefined}\n        actions={this.props.methods}\n      >\n        <Descriptions\n          column={1}\n          size='small'\n          layout={layout}\n          bordered={false}\n        >\n          {items}\n        </Descriptions>\n        {this.props.children}\n      </Card>\n    )\n  }\n}\n\nexport default Description\n","import React from 'react'\nimport * as dmv from 'dicom-microscopy-viewer'\n\nimport Description from './Description'\n\ninterface ClinicalTrialProps {\n  metadata: dmv.metadata.SOPClass\n}\n\n/**\n * React component representing a DICOM ClinicalTrial Information Entity that displays\n * common study-level attributes of contained DICOM Slide Microscopy images.\n */\nclass ClinicalTrial extends React.Component<ClinicalTrialProps> {\n  render (): React.ReactNode {\n    const attributes = []\n    if (this.props.metadata.ClinicalTrialSponsorName != null) {\n      // Attributes of Clinical Trial Subject module\n      attributes.push(\n        ...[\n          {\n            name: 'Sponsor Name',\n            value: this.props.metadata.ClinicalTrialSponsorName\n          },\n          {\n            name: 'Protocol ID',\n            value: this.props.metadata.ClinicalTrialProtocolID\n          },\n          {\n            name: 'Protocol Name',\n            value: this.props.metadata.ClinicalTrialProtocolName\n          },\n          {\n            name: 'Site Name',\n            value: this.props.metadata.ClinicalTrialSiteName\n          }\n        ]\n      )\n    }\n    if (this.props.metadata.ClinicalTrialTimePointID != null) {\n      // Attributes of Clinical Trial Study module\n      attributes.push(\n        {\n          name: 'Time Point ID',\n          value: this.props.metadata.ClinicalTrialTimePointID\n        }\n      )\n    }\n    // Attributes of Clinical Trial Subject module\n    return <Description attributes={attributes} />\n  }\n}\n\nexport default ClinicalTrial\n","import * as dmv from 'dicom-microscopy-viewer'\n\nfunction parseName (value: dmv.metadata.PersonName|null|undefined): string {\n  if (typeof value === 'object' && value !== null && value !== undefined) {\n    if (value.Alphabetic !== undefined) {\n      return value.Alphabetic.split('^').join(' ')\n    }\n    return ''\n  }\n  return ''\n}\n\nfunction parseDate (value: string|null|undefined): string {\n  if (value !== null && value !== undefined) {\n    const year = value.substring(0, 4)\n    const month = value.substring(4, 6)\n    const day = value.substring(6, 8)\n    return `${year}-${month}-${day}`\n  }\n  return ''\n}\n\nfunction parseTime (value: string|null|undefined): string {\n  if (value !== null && value !== undefined) {\n    const hours = value.substring(0, 2)\n    const minutes = value.substring(2, 4)\n    const seconds = value.substring(4, 6)\n    return `${hours}:${minutes}:${seconds}`\n  }\n  return ''\n}\n\nfunction parseDateTime (value: string|null|undefined): string {\n  if (value !== null && value !== undefined) {\n    const year = value.substring(0, 4)\n    const month = value.substring(4, 6)\n    const day = value.substring(6, 8)\n    const hours = value.substring(8, 10)\n    const minutes = value.substring(10, 12)\n    const seconds = value.substring(12, 14)\n    return `${year}-${month}-${day} ${hours}:${minutes}:${seconds}`\n  }\n  return ''\n}\n\nfunction parseSex (value: string|null|undefined): string {\n  const lut: { [key: string]: string } = {\n    F: 'Female',\n    M: 'Male',\n    O: 'Other'\n  }\n  if (value !== null && value !== undefined) {\n    return lut[value]\n  }\n  return ''\n}\n\nexport { parseDate, parseDateTime, parseName, parseSex, parseTime }\n","import React from 'react'\nimport * as dmv from 'dicom-microscopy-viewer'\n\nimport Description from './Description'\nimport { parseName, parseSex, parseDate } from '../utils/values'\n\ninterface PatientProps {\n  metadata: dmv.metadata.Study|dmv.metadata.SOPClass\n}\n\n/**\n * React component representing a DICOM Patient Information Entity that\n * displays common study-level, patient-related attributes of contained\n * DICOM Slide Microscopy images.\n */\nclass Patient extends React.Component<PatientProps, {}> {\n  render (): React.ReactNode {\n    const attributes = [\n      {\n        name: 'ID',\n        value: this.props.metadata.PatientID\n      },\n      {\n        name: 'Name',\n        value: parseName(this.props.metadata.PatientName)\n      },\n      {\n        name: 'Gender',\n        value: parseSex(this.props.metadata.PatientSex)\n      },\n      {\n        name: 'Birthdate',\n        value: parseDate(this.props.metadata.PatientBirthDate)\n      }\n    ]\n    return (\n      <Description attributes={attributes} />\n    )\n  }\n}\n\nexport default Patient\n","import React from 'react'\nimport * as dmv from 'dicom-microscopy-viewer'\n\nimport Description from './Description'\nimport { parseDate, parseTime } from '../utils/values'\n\ninterface StudyProps {\n  metadata: dmv.metadata.Study|dmv.metadata.SOPClass\n}\n\n/**\n * React component representing a DICOM Study Information Entity that displays\n * common study-level attributes of contained DICOM Slide Microscopy images.\n */\nclass Study extends React.Component<StudyProps> {\n  render (): React.ReactNode {\n    const attributes = [\n      {\n        name: 'Accession #',\n        value: this.props.metadata.AccessionNumber\n      },\n      {\n        name: 'ID',\n        value: this.props.metadata.StudyID\n      },\n      {\n        name: 'Date',\n        value: parseDate(this.props.metadata.StudyDate)\n      },\n      {\n        name: 'Time',\n        value: parseTime(this.props.metadata.StudyTime)\n      }\n    ]\n    return <Description attributes={attributes} />\n  }\n}\n\nexport default Study\n","export enum StorageClasses {\n  VL_WHOLE_SLIDE_MICROSCOPY_IMAGE = '1.2.840.10008.5.1.4.1.1.77.1.6',\n  COMPREHENSIVE_SR = '1.2.840.10008.5.1.4.1.1.88.33',\n  COMPREHENSIVE_3D_SR = '1.2.840.10008.5.1.4.1.1.88.34',\n  SEGMENTATION = '1.2.840.10008.5.1.4.1.1.66.4',\n  MICROSCOPY_BULK_SIMPLE_ANNOTATION = '1.2.840.10008.5.1.4.1.1.91.1',\n  PARAMETRIC_MAP = '1.2.840.10008.5.1.4.1.1.30',\n  ADVANCED_BLENDING_PRESENTATION_STATE = '1.2.840.10008.5.1.4.1.1.11.8',\n  COLOR_SOFTCOPY_PRESENTATION_STATE = '1.2.840.10008.5.1.4.1.1.11.2',\n  GRAYSCALE_SOFTCOPY_PRESENTATION_STATE = '1.2.840.10008.5.1.4.1.1.11.1',\n  PSEUDOCOLOR_SOFTCOPY_PRESENTATION_STATE = '1.2.840.10008.5.1.4.1.1.11.3'\n}\n","// Use symbols to prevent exposing private attributes\nconst _subscriptions = Symbol('subscriptions')\nconst _lastSubscriptionId = Symbol('lastSubscriptionId')\n\n/**\n * Class to enable implementation of publish/subscribe pattern\n * @class\n * @classdesc Enables publishing/subscribing\n */\nexport default class PubSub {\n  constructor () {\n    this[_subscriptions] = {}\n    this[_lastSubscriptionId] = 0\n  }\n\n  /**\n   * Adds a subscription callback to the provided event name\n   * @param {string} eventName Event name that will trigger the callback\n   * @param {Function} callback Function to be executed when event is published\n   * @returns {void}\n   */\n  subscribe (eventName, callback) {\n    if (eventName === undefined) {\n      throw new Error('Trying to subscribe to an inexistent event')\n    }\n\n    if (typeof callback !== 'function') {\n      throw new Error('The provided callback must be a function')\n    }\n\n    if (!this[_subscriptions].hasOwnProperty(eventName)) {\n      this[_subscriptions][eventName] = {}\n    }\n\n    const subscriptionId = `sub${this[_lastSubscriptionId]++}`\n    this[_subscriptions][eventName][subscriptionId] = callback\n  }\n\n  /**\n   * Removes a subscription callback for the provided event name\n   * @param {string} eventName Event name for the registerd callback\n   * @param {Function} [callback] Function to have its subscription removed\n   * @returns {void}\n   */\n  unsubscribe (eventName, callback) {\n    const callbacks = this[_subscriptions][eventName] || {}\n    for (const subscriptionId in callbacks) {\n      if (!callback) {\n        delete callbacks[subscriptionId]\n      } else if (callbacks[subscriptionId] === callback) {\n        delete callbacks[subscriptionId]\n      }\n    }\n  }\n\n  /**\n   * Trigger all registered subscription callbacks for a specific event name\n   * @param {String} eventName Event name to trigger subscriptions from\n   * @param {any} [payload] Payload that will be passed to the callback fuction\n   * @returns {void}\n   */\n  publish (eventName, ...payload) {\n    if (eventName === undefined) {\n      throw new Error('Trying to publish an inexistent event')\n    }\n\n    const callbacks = this[_subscriptions][eventName] || {}\n    for (const subscriptionId in callbacks) {\n      callbacks[subscriptionId](...payload)\n    }\n  }\n\n  /**\n   * Cleares all subscriptions for current instance\n   * @returns {void}\n   */\n  unsubscribeFromAll () {\n    for (const eventName in this[_subscriptions]) {\n      const callbacks = this[_subscriptions][eventName]\n      for (const subscriptionId in callbacks) {\n        delete callbacks[subscriptionId]\n      }\n    }\n  }\n}\n","const errorTypes = {\n  AUTHENTICATION: 'Authentication',\n  COMMUNICATION: 'Communication',\n  ENCODINGANDDECODING: 'EncodingDecoding',\n  VISUALIZATION: 'Visualization'\n}\n\nclass CustomError extends Error {\n  constructor (type, message) {\n    super()\n    this.message = message\n    this.stack = new Error().stack\n    this.type = type\n  }\n}\n\nexport { errorTypes, CustomError }\n","import PubSub from '../utils/PubSub'\nimport { notification } from 'antd'\nimport { CustomError, errorTypes } from '../utils/CustomError'\n\nexport const NotificationMiddlewareEvents = {\n  OnError: 'onError',\n  OnWarning: 'onWarning'\n}\n\nexport const NotificationMiddlewareContext = {\n  DICOMWEB: 'dicomweb-client',\n  DMV: 'dicom-microscopy-viewer',\n  DCMJS: 'dcmjs',\n  SLIM: 'slim',\n  AUTH: 'authentication'\n}\n\nconst NotificationType = {\n  TOAST: 'toast',\n  CONSOLE: 'console'\n}\n\n/* Sources of Error:\n  1. 'dicomweb-client': Error while requesting/fetching data, tagged as 'Communication'\n  2. 'slim' and 'dicom-microscopy-viewer' library: Error related to dicom data encoding/decoding,\n  could directly/indirectly impact image-related visualization, tagged as 'Visualization' or\n  'Encoding/Decoding' accordingly\n  3. 'dcmjs' library: Data parsing error, tagged as 'DICOMError'\n  4. 'authentication': Error during user authentication, tagged as 'Authentication'\n  */\nconst NotificationSourceDefinition = {\n  sources: [\n    {\n      category: errorTypes.AUTHENTICATION,\n      notificationType: NotificationType.TOAST\n    },\n    {\n      category: errorTypes.COMMUNICATION,\n      notificationType: NotificationType.TOAST\n    },\n    {\n      category: errorTypes.VISUALIZATION,\n      notificationType: NotificationType.TOAST\n    },\n    {\n      category: errorTypes.ENCODINGANDDECODING,\n      notificationType: NotificationType.CONSOLE\n    },\n    {\n      category: 'Warning',\n      notificationType: NotificationType.TOAST\n    }\n  ]\n}\n\nclass NotificationMiddleware extends PubSub {\n  constructor () {\n    super()\n\n    const outerContext = (args) => {\n      this.publish(NotificationMiddlewareEvents.OnWarning, Array.from(args).join(' '))\n    }\n\n    (function () {\n      const warn = console.warn\n      console.warn = function () {\n        if (!JSON.stringify(arguments).includes('request')) {\n          outerContext(arguments)\n        }\n        warn.apply(this, Array.prototype.slice.call(arguments))\n      }\n    }())\n  }\n\n  /**\n   * Error handling middleware function\n   *\n   * @param source - source of error - dicomweb-client, dmv, dcmjs or slim itself\n   * @param error - error object\n   */\n  onError (source, error) {\n    const errorCategory = error.type\n    const sourceConfig = NotificationSourceDefinition.sources.find(\n      s => s.category === errorCategory\n    )\n\n    const { notificationType } = sourceConfig\n\n    this.publish(NotificationMiddlewareEvents.OnError, {\n      source,\n      error\n    })\n\n    let notificationMsg\n    if (error instanceof CustomError) {\n      notificationMsg = error.message\n    } else {\n      notificationMsg = String(error)\n    }\n\n    switch (notificationType) {\n      case NotificationType.TOAST:\n        console.error(`A ${errorCategory} error occurred: `, error)\n        return notification.error({\n          message: `${errorCategory} error`,\n          description: notificationMsg,\n          duration: 3\n        })\n\n      case NotificationType.CONSOLE:\n        console.error(`A ${errorCategory} error occurred: `, error)\n        break\n\n      default:\n    }\n  }\n}\n\nexport default new NotificationMiddleware()\n","import React from 'react'\nimport { FaSpinner } from 'react-icons/fa'\nimport * as dmv from 'dicom-microscopy-viewer'\nimport { Menu } from 'antd'\n\nimport DicomWebManager from '../DicomWebManager'\nimport Description from './Description'\nimport { Slide } from '../data/slides'\nimport { StorageClasses } from '../data/uids'\nimport NotificationMiddleware, {\n  NotificationMiddlewareContext\n} from '../services/NotificationMiddleware'\nimport { CustomError } from '../utils/CustomError'\n\ninterface SlideItemProps {\n  clients: { [key: string]: DicomWebManager }\n  slide: Slide\n}\n\ninterface SlideItemState {\n  isLoading: boolean\n}\n\n/**\n * React component representing a DICOM Series Information Entity that displays\n * common series-level attributes of contained DICOM Slide Microscopy images\n * as well as the OVERVIEW image (if available).\n * When selected a Slide Viewer instance is created for the display of the\n * contained images.\n */\nclass SlideItem extends React.Component<SlideItemProps, SlideItemState> {\n  state = { isLoading: false }\n\n  private readonly overviewViewportRef = React.createRef<HTMLDivElement>()\n\n  private overviewViewer?: dmv.viewer.OverviewImageViewer\n\n  constructor (props: SlideItemProps) {\n    super(props)\n    this.overviewViewer = undefined\n  }\n\n  componentDidMount (): void {\n    this.setState({ isLoading: true })\n    if (this.props.slide.overviewImages.length > 0) {\n      const metadata = this.props.slide.overviewImages[0]\n      if (this.overviewViewportRef.current !== null) {\n        this.overviewViewportRef.current.innerHTML = ''\n        console.info(\n          'instantiate viewer for OVERVIEW image of slide ' +\n          `\"${metadata.ContainerIdentifier}\"`\n        )\n        this.overviewViewer = new dmv.viewer.OverviewImageViewer({\n          client: this.props.clients[\n            StorageClasses.VL_WHOLE_SLIDE_MICROSCOPY_IMAGE\n          ],\n          metadata: metadata,\n          resizeFactor: 1,\n          errorInterceptor: (error: CustomError) => {\n            NotificationMiddleware.onError(\n              NotificationMiddlewareContext.DMV,\n              error\n            )\n          }\n        })\n        this.overviewViewer.render({\n          container: this.overviewViewportRef.current\n        })\n      }\n    }\n\n    this.setState({ isLoading: false })\n  }\n\n  render (): React.ReactNode {\n    if (this.overviewViewer !== undefined) {\n      this.overviewViewer.resize()\n    }\n    const attributes = []\n    const description = this.props.slide.description\n    if (description != null && description !== '') {\n      attributes.push({\n        name: 'Description',\n        value: description\n      })\n    }\n    if (this.state.isLoading) {\n      return (<FaSpinner />)\n    }\n\n    /* Properties need to be propagated down to Menu.Item:\n     * https://github.com/react-component/menu/issues/142\n     */\n    return (\n      <Menu.Item\n        style={{ height: '100%' }}\n        key={this.props.slide.seriesInstanceUIDs[0]}\n        {...this.props}\n      >\n        <Description\n          header={this.props.slide.containerIdentifier}\n          attributes={attributes}\n          selectable\n        >\n          {(this.overviewViewportRef.current != null) && <div style={{ height: '100px' }} ref={this.overviewViewportRef} />}\n        </Description>\n      </Menu.Item>\n    )\n  }\n}\n\nexport default SlideItem\n","import React from 'react'\nimport { Menu } from 'antd'\n\nimport DicomWebManager from '../DicomWebManager'\nimport SlideItem from './SlideItem'\nimport { Slide } from '../data/slides'\n\ninterface SlideListProps {\n  metadata: Slide[]\n  clients: { [key: string]: DicomWebManager }\n  selectedSeriesInstanceUID: string\n  onSeriesSelection: (\n    { seriesInstanceUID }: { seriesInstanceUID: string }\n  ) => void\n}\n\ninterface SlideListState {\n  selectedSeriesInstanceUID: string\n}\n\n/**\n * React component representing a list of DICOM Series Information Entities.\n */\nclass SlideList extends React.Component<SlideListProps, SlideListState> {\n  state = {\n    selectedSeriesInstanceUID: this.props.selectedSeriesInstanceUID\n  }\n\n  componentDidMount (): void {\n    this.props.onSeriesSelection({\n      seriesInstanceUID: this.state.selectedSeriesInstanceUID\n    })\n  }\n\n  render (): React.ReactNode {\n    const slideList = this.props.metadata\n    const slideItemList = []\n    for (let i = 0; i < slideList.length; ++i) {\n      const slide = slideList[i]\n      const slideItem = (\n        <SlideItem\n          key={slide.seriesInstanceUIDs[0]}\n          slide={slide}\n          clients={this.props.clients}\n        />\n      )\n\n      slideItemList.push(slideItem)\n    }\n\n    const handleMenuItemSelection = ({ key, keyPath, domEvent, selectedKeys }: {\n      key: React.ReactText\n      keyPath: React.ReactText[]\n      domEvent: React.MouseEvent<HTMLElement> | React.KeyboardEvent<HTMLElement>\n      selectedKeys?: React.ReactText[]\n    }): void => {\n      console.info(`select slide \"${key}\"`)\n      this.setState({ selectedSeriesInstanceUID: key.toString() })\n      this.props.onSeriesSelection({ seriesInstanceUID: key.toString() })\n    }\n\n    let selectedKeys\n    if (this.state.selectedSeriesInstanceUID !== undefined &&\n      this.state.selectedSeriesInstanceUID !== null) {\n      selectedKeys = [this.state.selectedSeriesInstanceUID]\n    }\n\n    return (\n      <Menu\n        style={{ width: '100%' }}\n        selectedKeys={selectedKeys}\n        onSelect={handleMenuItemSelection}\n        mode='inline'\n        inlineIndent={0}\n      >\n        {slideItemList}\n      </Menu>\n    )\n  }\n}\n\nexport default SlideList\n","import React from 'react'\nimport * as dmv from 'dicom-microscopy-viewer'\nimport * as dcmjs from 'dcmjs'\nimport { Menu, Space, Switch } from 'antd'\nimport { FaEye, FaEyeSlash } from 'react-icons/fa'\n\nimport Description from './Description'\n\ninterface AnnotationItemProps {\n  roi: dmv.roi.ROI\n  index: number\n  isVisible: boolean\n  onVisibilityChange: ({ roiUID, isVisible }: {\n    roiUID: string\n    isVisible: boolean\n  }) => void\n}\n\n/**\n * React component representing a Region of Interest (ROI) annotation.\n */\nclass AnnotationItem extends React.Component<AnnotationItemProps, {}> {\n  constructor (props: AnnotationItemProps) {\n    super(props)\n    this.handleVisibilityChange = this.handleVisibilityChange.bind(this)\n  }\n\n  handleVisibilityChange (\n    checked: boolean,\n    event: React.MouseEvent<HTMLButtonElement>\n  ): void {\n    this.props.onVisibilityChange({\n      roiUID: this.props.roi.uid,\n      isVisible: checked\n    })\n  }\n\n  render (): React.ReactNode {\n    const identifier = `ROI ${this.props.index + 1}`\n    const attributes: Array<{ name: string, value: string }> = []\n    /**\n     * This hack is required for Menu.Item to work properly:\n     * https://github.com/react-component/menu/issues/142\n     */\n    const { isVisible, onVisibilityChange, ...otherProps } = this.props\n    this.props.roi.evaluations.forEach((\n      item: (\n        dcmjs.sr.valueTypes.TextContentItem |\n        dcmjs.sr.valueTypes.CodeContentItem\n      )\n    ) => {\n      const nameValue = item.ConceptNameCodeSequence[0].CodeValue\n      const nameMeaning = item.ConceptNameCodeSequence[0].CodeMeaning\n      const name = `${nameMeaning}`\n      if (item.ValueType === dcmjs.sr.valueTypes.ValueTypes.CODE) {\n        const codeContentItem = item as dcmjs.sr.valueTypes.CodeContentItem\n        const valueMeaning = codeContentItem.ConceptCodeSequence[0].CodeMeaning\n        // For consistency with Segment and Annotation Group\n        if (nameValue === '276214006') {\n          attributes.push({\n            name: 'Property category',\n            value: `${valueMeaning}`\n          })\n        } else if (nameValue === '121071') {\n          attributes.push({\n            name: 'Property type',\n            value: `${valueMeaning}`\n          })\n        } else if (nameValue === '111001') {\n          attributes.push({\n            name: 'Algorithm Name',\n            value: `${valueMeaning}`\n          })\n        } else {\n          attributes.push({\n            name: name,\n            value: `${valueMeaning}`\n          })\n        }\n      } else if (item.ValueType === dcmjs.sr.valueTypes.ValueTypes.TEXT) {\n        const textContentItem = item as dcmjs.sr.valueTypes.TextContentItem\n        attributes.push({\n          name: name,\n          value: textContentItem.TextValue\n        })\n      }\n    })\n    this.props.roi.measurements.forEach(item => {\n      const nameMeaning = item.ConceptNameCodeSequence[0].CodeMeaning\n      const name = `${nameMeaning}`\n      const seq = item.MeasuredValueSequence[0]\n      const value = seq.NumericValue.toPrecision(6)\n      const unit = seq.MeasurementUnitsCodeSequence[0].CodeValue\n      attributes.push({\n        name: name,\n        value: `${value} ${unit}`\n      })\n    })\n    return (\n      <Space align='start'>\n        <div style={{ paddingLeft: '14px' }}>\n          <Switch\n            size='small'\n            onChange={this.handleVisibilityChange}\n            checked={this.props.isVisible}\n            checkedChildren={<FaEye />}\n            unCheckedChildren={<FaEyeSlash />}\n          />\n        </div>\n        <Menu.Item\n          style={{ height: '100%', paddingLeft: '3px' }}\n          key={this.props.roi.uid}\n          {...otherProps}\n        >\n          <Description\n            header={identifier}\n            attributes={attributes}\n            selectable\n            hasLongValues\n          />\n        </Menu.Item>\n      </Space>\n    )\n  }\n}\n\nexport default AnnotationItem\n","import React from 'react'\nimport * as dmv from 'dicom-microscopy-viewer'\nimport { Menu, Switch } from 'antd'\nimport { FaEye, FaEyeSlash } from 'react-icons/fa'\n\nimport AnnotationItem from './AnnotationItem'\n\ninterface AnnotationListProps {\n  rois: dmv.roi.ROI[]\n  selectedRoiUIDs: Set<string>\n  visibleRoiUIDs: Set<string>\n  onVisibilityChange: ({ roiUID, isVisible }: {\n    roiUID: string\n    isVisible: boolean\n  }) => void\n  onSelection: ({ roiUID }: { roiUID: string }) => void\n}\n\n/**\n * React component representing a list of Region of Interest (ROI)\n * annotations.\n */\nclass AnnotationList extends React.Component<AnnotationListProps, {}> {\n  constructor (props: AnnotationListProps) {\n    super(props)\n    this.handleMenuItemSelection = this.handleMenuItemSelection.bind(this)\n    this.handleVisibilityChange = this.handleVisibilityChange.bind(this)\n  }\n\n  handleVisibilityChange (\n    checked: boolean,\n    event: React.MouseEvent<HTMLButtonElement>\n  ): void {\n    if (checked) {\n      this.props.rois.forEach(roi => {\n        this.props.onVisibilityChange({ roiUID: roi.uid, isVisible: checked })\n      })\n    } else {\n      this.props.visibleRoiUIDs.forEach(roiUID => {\n        this.props.onVisibilityChange({ roiUID, isVisible: checked })\n      })\n    }\n  }\n\n  handleMenuItemSelection (object: any): void {\n    this.props.onSelection({ roiUID: object.key })\n  }\n\n  render (): React.ReactNode {\n    const items = this.props.rois.map((roi, index) => (\n      <AnnotationItem\n        key={roi.uid}\n        roi={roi}\n        index={index}\n        isVisible={this.props.visibleRoiUIDs.has(roi.uid)}\n        onVisibilityChange={this.props.onVisibilityChange}\n      />\n    ))\n\n    return (\n      <>\n        <div style={{ paddingLeft: '14px', paddingTop: '7px', paddingBottom: '7px' }}>\n          <Switch\n            size='small'\n            onChange={this.handleVisibilityChange}\n            checked={this.props.visibleRoiUIDs.size > 0}\n            checkedChildren={<FaEye />}\n            unCheckedChildren={<FaEyeSlash />}\n          />\n        </div>\n        <Menu\n          selectedKeys={[...this.props.selectedRoiUIDs.values()]}\n          onSelect={this.handleMenuItemSelection}\n          onClick={this.handleMenuItemSelection}\n        >\n          {items}\n        </Menu>\n      </>\n    )\n  }\n}\n\nexport default AnnotationList\n","import React from 'react'\nimport {\n  Badge,\n  Button,\n  Col,\n  Divider,\n  InputNumber,\n  Menu,\n  Popover,\n  Row,\n  Select,\n  Slider,\n  Space,\n  Switch\n} from 'antd'\nimport { SettingOutlined } from '@ant-design/icons'\nimport { FaEye, FaEyeSlash } from 'react-icons/fa'\nimport * as dmv from 'dicom-microscopy-viewer'\nimport * as dcmjs from 'dcmjs'\n\nimport Description from './Description'\n\ninterface AnnotationGroupItemProps {\n  annotationGroup: dmv.annotation.AnnotationGroup\n  isVisible: boolean\n  metadata: dmv.metadata.MicroscopyBulkSimpleAnnotations\n  defaultStyle: {\n    opacity: number\n    color: number[]\n  }\n  onVisibilityChange: ({ annotationGroupUID, isVisible }: {\n    annotationGroupUID: string\n    isVisible: boolean\n  }) => void\n  onStyleChange: ({ uid, styleOptions }: {\n    uid: string\n    styleOptions: {\n      opacity?: number\n      color?: number[]\n      limitValues?: number[]\n      measurement?: dcmjs.sr.coding.CodedConcept\n    }\n  }) => void\n}\n\ninterface AnnotationGroupItemState {\n  isVisible: boolean\n  currentStyle: {\n    opacity: number\n    color?: number[]\n    limitValues?: number[]\n    measurement?: dcmjs.sr.coding.CodedConcept\n  }\n}\n\n/**\n * React component representing an Annotation Group.\n */\nclass AnnotationGroupItem extends React.Component<AnnotationGroupItemProps, AnnotationGroupItemState> {\n  constructor (props: AnnotationGroupItemProps) {\n    super(props)\n    this.handleVisibilityChange = this.handleVisibilityChange.bind(this)\n    this.handleMeasurementSelection = this.handleMeasurementSelection.bind(this)\n    this.handleOpacityChange = this.handleOpacityChange.bind(this)\n    this.handleColorRChange = this.handleColorRChange.bind(this)\n    this.handleColorGChange = this.handleColorGChange.bind(this)\n    this.handleColorBChange = this.handleColorBChange.bind(this)\n    this.getCurrentColor = this.getCurrentColor.bind(this)\n    this.state = {\n      isVisible: this.props.isVisible,\n      currentStyle: {\n        opacity: this.props.defaultStyle.opacity,\n        color: this.props.defaultStyle.color\n      }\n    }\n  }\n\n  handleVisibilityChange (\n    checked: boolean,\n    event: React.MouseEvent<HTMLButtonElement>\n  ): void {\n    this.props.onVisibilityChange({\n      annotationGroupUID: this.props.annotationGroup.uid,\n      isVisible: checked\n    })\n    this.setState({ isVisible: checked })\n  }\n\n  handleOpacityChange (value: number | null): void {\n    if (value != null) {\n      this.props.onStyleChange({\n        uid: this.props.annotationGroup.uid,\n        styleOptions: {\n          opacity: value\n        }\n      })\n      this.setState({\n        currentStyle: {\n          opacity: value,\n          color: this.state.currentStyle.color,\n          limitValues: this.state.currentStyle.limitValues\n        }\n      })\n    }\n  }\n\n  handleColorRChange (\n    value: number | number[] | null\n  ): void {\n    if (value != null && this.state.currentStyle.color !== undefined) {\n      const color = [\n        Array.isArray(value) ? value[0] : value,\n        this.state.currentStyle.color[1],\n        this.state.currentStyle.color[2]\n      ]\n      this.setState(state => ({\n        currentStyle: {\n          color: color,\n          opacity: state.currentStyle.opacity,\n          limitValues: state.currentStyle.limitValues\n        }\n      }))\n      this.props.onStyleChange({\n        uid: this.props.annotationGroup.uid,\n        styleOptions: { color: color }\n      })\n    }\n  }\n\n  handleColorGChange (\n    value: number | number[] | null\n  ): void {\n    if (value != null && this.state.currentStyle.color !== undefined) {\n      const color = [\n        this.state.currentStyle.color[0],\n        Array.isArray(value) ? value[0] : value,\n        this.state.currentStyle.color[2]\n      ]\n      this.setState(state => ({\n        currentStyle: {\n          color: color,\n          opacity: state.currentStyle.opacity,\n          limitValues: state.currentStyle.limitValues\n        }\n      }))\n      this.props.onStyleChange({\n        uid: this.props.annotationGroup.uid,\n        styleOptions: { color: color }\n      })\n    }\n  }\n\n  handleColorBChange (\n    value: number | number[] | null\n  ): void {\n    if (value != null && this.state.currentStyle.color !== undefined) {\n      const color = [\n        this.state.currentStyle.color[0],\n        this.state.currentStyle.color[1],\n        Array.isArray(value) ? value[0] : value\n      ]\n      this.setState(state => ({\n        currentStyle: {\n          color: color,\n          opacity: state.currentStyle.opacity,\n          limitValues: state.currentStyle.limitValues\n        }\n      }))\n      this.props.onStyleChange({\n        uid: this.props.annotationGroup.uid,\n        styleOptions: { color: color }\n      })\n    }\n  }\n\n  getCurrentColor (): string {\n    const rgb2hex = (values: number[]): string => {\n      const r = values[0]\n      const g = values[1]\n      const b = values[2]\n      return '#' + (0x1000000 + (r << 16) + (g << 8) + b).toString(16).slice(1)\n    }\n\n    if (this.state.currentStyle.color != null) {\n      return rgb2hex(this.state.currentStyle.color)\n    } else {\n      return 'white'\n    }\n  }\n\n  handleLowerLimitChange (\n    value: number | null\n  ): void {\n    if (value != null && this.state.currentStyle.limitValues !== undefined) {\n      this.setState(state => {\n        if (state.currentStyle.limitValues !== undefined) {\n          return {\n            currentStyle: {\n              color: state.currentStyle.color,\n              opacity: state.currentStyle.opacity,\n              limitValues: [value, state.currentStyle.limitValues[1]]\n            }\n          }\n        } else {\n          return {\n            currentStyle: {\n              color: state.currentStyle.color,\n              opacity: state.currentStyle.opacity,\n              limitValues: state.currentStyle.limitValues\n            }\n          }\n        }\n      })\n      this.props.onStyleChange({\n        uid: this.props.annotationGroup.uid,\n        styleOptions: {\n          limitValues: [\n            value,\n            this.state.currentStyle.limitValues[1]\n          ]\n        }\n      })\n    }\n  }\n\n  handleUpperLimitChange (\n    value: number | null\n  ): void {\n    if (value != null && this.state.currentStyle.limitValues !== undefined) {\n      this.setState(state => {\n        if (state.currentStyle.limitValues !== undefined) {\n          return {\n            currentStyle: {\n              color: state.currentStyle.color,\n              opacity: state.currentStyle.opacity,\n              limitValues: [state.currentStyle.limitValues[0], value]\n            }\n          }\n        } else {\n          return {\n            currentStyle: {\n              color: state.currentStyle.color,\n              opacity: state.currentStyle.opacity,\n              limitValues: state.currentStyle.limitValues\n            }\n          }\n        }\n      })\n      this.props.onStyleChange({\n        uid: this.props.annotationGroup.uid,\n        styleOptions: {\n          limitValues: [\n            this.state.currentStyle.limitValues[0],\n            value\n          ]\n        }\n      })\n    }\n  }\n\n  handleLimitChange (\n    values: number[]\n  ): void {\n    this.setState(state => ({\n      currentStyle: {\n        color: state.currentStyle.color,\n        opacity: state.currentStyle.opacity,\n        limitValues: values\n      }\n    }))\n    this.props.onStyleChange({\n      uid: this.props.annotationGroup.uid,\n      styleOptions: { limitValues: values }\n    })\n  }\n\n  handleMeasurementSelection (value?: string, option?: any): void {\n    if (value != null && option.children != null) {\n      const codeComponents = value.split('-')\n      const measurement = new dcmjs.sr.coding.CodedConcept({\n        value: codeComponents[1],\n        schemeDesignator: codeComponents[0],\n        meaning: option.children\n      })\n      this.props.onStyleChange({\n        uid: this.props.annotationGroup.uid,\n        styleOptions: { measurement }\n      })\n      this.setState(state => ({\n        currentStyle: {\n          opacity: state.currentStyle.opacity,\n          measurement\n        }\n      }))\n    } else {\n      this.props.onStyleChange({\n        uid: this.props.annotationGroup.uid,\n        styleOptions: {\n          color: this.props.defaultStyle.color\n        }\n      })\n      this.setState(state => ({\n        currentStyle: {\n          opacity: state.currentStyle.opacity,\n          color: this.props.defaultStyle.color,\n          limitValues: undefined\n        }\n      }))\n    }\n  }\n\n  render (): React.ReactNode {\n    const index = this.props.metadata.AnnotationGroupSequence.findIndex(\n      item => (item.AnnotationGroupUID === this.props.annotationGroup.uid)\n    )\n    const item = this.props.metadata.AnnotationGroupSequence[index]\n    const attributes: Array<{ name: string, value: string }> = [\n      {\n        name: 'Property type',\n        value: this.props.annotationGroup.propertyType.CodeMeaning\n      },\n      {\n        name: 'Property category',\n        value: this.props.annotationGroup.propertyCategory.CodeMeaning\n      },\n      // {\n      //   name: 'Algorithm Name',\n      //   value: this.props.annotationGroup.algorithmName\n      // },\n      {\n        name: 'Graphic type',\n        value: item.GraphicType\n      },\n      {\n        name: 'Annotation coordinate type',\n        value: this.props.metadata.AnnotationCoordinateType\n      }\n    ]\n\n    const measurementsSequence = item.MeasurementsSequence ?? []\n    const measurementOptions = measurementsSequence.map((measurementItem, i) => {\n      const name = measurementItem.ConceptNameCodeSequence[0]\n      return (\n        <Select.Option\n          key={i}\n          value={`${name.CodingSchemeDesignator}-${name.CodeValue}`}\n          dropdownMatchSelectWidth={false}\n          size='small'\n          disabled={!this.props.isVisible}\n        >\n          {name.CodeMeaning}\n        </Select.Option>\n      )\n    })\n    measurementOptions.push(\n      <Select.Option\n        key='-'\n        value={undefined}\n        dropdownMatchSelectWidth={false}\n        size='small'\n        disabled={!this.props.isVisible}\n      >\n        <></>\n      </Select.Option>\n    )\n\n    let colorSettings\n    if (this.state.currentStyle.color != null) {\n      colorSettings = (\n        <>\n          <Divider plain>\n            Color\n          </Divider>\n          <Row justify='center' align='middle' gutter={[8, 8]}>\n            <Col span={5}>\n              Red\n            </Col>\n            <Col span={14}>\n              <Slider\n                range={false}\n                min={0}\n                max={255}\n                step={1}\n                value={this.state.currentStyle.color[0]}\n                onChange={this.handleColorRChange}\n              />\n            </Col>\n            <Col span={5}>\n              <InputNumber\n                min={0}\n                max={255}\n                size='small'\n                style={{ width: '65px' }}\n                value={this.state.currentStyle.color[0]}\n                onChange={this.handleColorRChange}\n              />\n            </Col>\n          </Row>\n\n          <Row justify='center' align='middle' gutter={[8, 8]}>\n            <Col span={5}>\n              Green\n            </Col>\n            <Col span={14}>\n              <Slider\n                range={false}\n                min={0}\n                max={255}\n                step={1}\n                value={this.state.currentStyle.color[1]}\n                onChange={this.handleColorGChange}\n              />\n            </Col>\n            <Col span={5}>\n              <InputNumber\n                min={0}\n                max={255}\n                size='small'\n                style={{ width: '65px' }}\n                value={this.state.currentStyle.color[1]}\n                onChange={this.handleColorGChange}\n              />\n            </Col>\n          </Row>\n\n          <Row justify='center' align='middle' gutter={[8, 8]}>\n            <Col span={5}>\n              Blue\n            </Col>\n            <Col span={14}>\n              <Slider\n                range={false}\n                min={0}\n                max={255}\n                step={1}\n                value={this.state.currentStyle.color[2]}\n                onChange={this.handleColorBChange}\n              />\n            </Col>\n            <Col span={5}>\n              <InputNumber\n                min={0}\n                max={255}\n                size='small'\n                style={{ width: '65px' }}\n                value={this.state.currentStyle.color[2]}\n                onChange={this.handleColorBChange}\n              />\n            </Col>\n          </Row>\n          <Divider plain />\n        </>\n      )\n    }\n\n    let windowSettings\n    let explorationSettings\n    if (measurementsSequence.length > 0) {\n      if (this.state.currentStyle.limitValues != null) {\n        // TODO: need to get default min/max values from viewer first\n        const minValue = 0\n        const maxValue = 1000\n        windowSettings = (\n          <>\n            <Divider plain>\n              Values of interest\n            </Divider>\n            <Row justify='center' align='middle' gutter={[8, 8]}>\n              <Col span={6}>\n                <InputNumber\n                  min={0}\n                  max={this.state.currentStyle.limitValues[1]}\n                  size='small'\n                  style={{ width: '75px' }}\n                  value={this.state.currentStyle.limitValues[0]}\n                  onChange={this.handleLowerLimitChange}\n                />\n              </Col>\n              <Col span={12}>\n                <Slider\n                  range\n                  min={minValue}\n                  max={maxValue}\n                  step={1}\n                  value={[\n                    this.state.currentStyle.limitValues[0],\n                    this.state.currentStyle.limitValues[1]\n                  ]}\n                  onChange={this.handleLimitChange}\n                />\n              </Col>\n              <Col span={6}>\n                <InputNumber\n                  min={this.state.currentStyle.limitValues[0]}\n                  max={maxValue}\n                  size='small'\n                  style={{ width: '75px' }}\n                  value={this.state.currentStyle.limitValues[1]}\n                  onChange={this.handleUpperLimitChange}\n                />\n              </Col>\n            </Row>\n          </>\n        )\n      }\n      explorationSettings = (\n        <>\n          <Divider plain>\n            Exploration\n          </Divider>\n          <Row justify='start' align='middle' gutter={[8, 8]}>\n            <Col span={8}>\n              Measurement\n            </Col>\n            <Col span={16}>\n              <Select\n                style={{ minWidth: '65px', width: '90%' }}\n                onSelect={this.handleMeasurementSelection}\n                key='annotation-group-measurements'\n                defaultValue={undefined}\n              >\n                {measurementOptions}\n              </Select>\n            </Col>\n          </Row>\n        </>\n      )\n    }\n\n    const settings = (\n      <div>\n        {colorSettings}\n        {windowSettings}\n        <Row justify='start' align='middle' gutter={[8, 8]}>\n          <Col span={6}>\n            Opacity\n          </Col>\n          <Col span={12}>\n            <Slider\n              range={false}\n              min={0}\n              max={1}\n              step={0.01}\n              value={this.state.currentStyle.opacity}\n              onChange={this.handleOpacityChange}\n            />\n          </Col>\n          <Col span={6}>\n            <InputNumber\n              min={0}\n              max={1}\n              size='small'\n              step={0.1}\n              style={{ width: '65px' }}\n              value={this.state.currentStyle.opacity}\n              onChange={this.handleOpacityChange}\n            />\n          </Col>\n        </Row>\n        {explorationSettings}\n      </div>\n    )\n\n    const color = this.getCurrentColor()\n    const isBadgeVisible = (\n      this.state.isVisible && this.state.currentStyle.measurement == null\n    )\n    const {\n      annotationGroup,\n      defaultStyle,\n      isVisible,\n      metadata,\n      onVisibilityChange,\n      onStyleChange,\n      ...otherProps\n    } = this.props\n    return (\n      <Menu.Item\n        style={{ height: '100%', paddingLeft: '3px' }}\n        key={this.props.annotationGroup.uid}\n        {...otherProps}\n      >\n        <Space align='start'>\n          <div style={{ paddingLeft: '14px' }}>\n            <Space direction='vertical' align='end'>\n              <Switch\n                size='small'\n                onChange={this.handleVisibilityChange}\n                checked={this.props.isVisible}\n                checkedChildren={<FaEye />}\n                unCheckedChildren={<FaEyeSlash />}\n              />\n              <Popover\n                placement='left'\n                content={settings}\n                overlayStyle={{ width: '350px' }}\n                title='Display Settings'\n              >\n                <Button\n                  type='primary'\n                  shape='circle'\n                  icon={<SettingOutlined />}\n                />\n              </Popover>\n            </Space>\n          </div>\n          <Badge\n            offset={[-20, 20]}\n            count={' '}\n            style={{\n              borderStyle: 'solid',\n              borderWidth: '1px',\n              borderColor: 'gray',\n              visibility: isBadgeVisible ? 'visible' : 'hidden',\n              backgroundImage: `linear-gradient(to bottom, ${color}, ${color}`\n            }}\n          >\n            <Description\n              header={this.props.annotationGroup.label}\n              attributes={attributes}\n              selectable\n              hasLongValues\n            />\n          </Badge>\n        </Space>\n      </Menu.Item>\n    )\n  }\n}\n\nexport default AnnotationGroupItem\n","import React from 'react'\nimport { Menu } from 'antd'\nimport * as dmv from 'dicom-microscopy-viewer'\nimport * as dcmjs from 'dcmjs'\n\nimport AnnotationGroupItem from './AnnotationGroupItem'\n\ninterface AnnotationGroupListProps {\n  annotationGroups: dmv.annotation.AnnotationGroup[]\n  visibleAnnotationGroupUIDs: Set<string>\n  metadata: {\n    [annotationGroupUID: string]: dmv.metadata.MicroscopyBulkSimpleAnnotations\n  }\n  defaultAnnotationGroupStyles: {\n    [annotationGroupUID: string]: {\n      opacity: number\n      color: number[]\n    }\n  }\n  onAnnotationGroupVisibilityChange: ({ annotationGroupUID, isVisible }: {\n    annotationGroupUID: string\n    isVisible: boolean\n  }) => void\n  onAnnotationGroupStyleChange: ({ uid, styleOptions }: {\n    uid: string\n    styleOptions: {\n      opacity?: number\n      color?: number[]\n      measurement?: dcmjs.sr.coding.CodedConcept\n    }\n  }) => void\n}\n\n/**\n * React component representing a list of Annotation Groups.\n */\nclass AnnotationGroupList extends React.Component<AnnotationGroupListProps, {}> {\n  render (): React.ReactNode {\n    const items = this.props.annotationGroups.map((annotationGroup, index) => {\n      const uid = annotationGroup.uid\n      return (\n        <AnnotationGroupItem\n          key={annotationGroup.uid}\n          annotationGroup={annotationGroup}\n          metadata={this.props.metadata[uid]}\n          isVisible={this.props.visibleAnnotationGroupUIDs.has(uid)}\n          defaultStyle={this.props.defaultAnnotationGroupStyles[uid]}\n          onVisibilityChange={this.props.onAnnotationGroupVisibilityChange}\n          onStyleChange={this.props.onAnnotationGroupStyleChange}\n        />\n      )\n    })\n\n    return (\n      <Menu selectable={false}>\n        {items}\n      </Menu>\n    )\n  }\n}\n\nexport default AnnotationGroupList\n","import React from 'react'\nimport { Button as Btn, Divider, Tooltip } from 'antd'\n\ninterface ButtonProps {\n  icon: any\n  tooltip?: string\n  label?: string\n  onClick?: (options: any) => void\n  isSelected?: boolean\n}\n\n/**\n * React component for a button.\n */\nclass Button extends React.Component<ButtonProps, {}> {\n  constructor (props: ButtonProps) {\n    super(props)\n    this.handleClick = this.handleClick.bind(this)\n  }\n\n  handleClick (event: React.SyntheticEvent): void {\n    if (this.props.onClick !== undefined) {\n      this.props.onClick(event)\n    }\n  }\n\n  render (): React.ReactNode {\n    const Icon = this.props.icon\n    if (Icon === undefined) {\n      return null\n    }\n\n    let text\n    if (this.props.label != null) {\n      text = (\n        <>\n          <Divider type='vertical' />\n          {this.props.label}\n        </>\n      )\n    }\n\n    let button\n    if (this.props.isSelected ?? false) {\n      button = (\n        <Btn\n          onClick={this.handleClick}\n          icon={<Icon />}\n          type='primary'\n          style={{ lineHeight: '1.0' }}\n        >\n          {text}\n        </Btn>\n      )\n    } else {\n      button = (\n        <Btn\n          onClick={this.handleClick}\n          icon={<Icon />}\n          type='default'\n          style={{ lineHeight: '1.0' }}\n        >\n          {text}\n        </Btn>\n      )\n    }\n\n    if (this.props.tooltip !== undefined) {\n      return (\n        <Tooltip title={this.props.tooltip}>\n          {button}\n        </Tooltip>\n      )\n    } else {\n      return button\n    }\n  }\n}\n\nexport default Button\n","import React from 'react'\nimport * as dmv from 'dicom-microscopy-viewer'\n\nimport Description from './Description'\n\ninterface EquipmentProps {\n  metadata?: dmv.metadata.VLWholeSlideMicroscopyImage\n}\n\n/**\n * React component representing a list of DICOM Equipment Entities.\n */\nclass Equipment extends React.Component<EquipmentProps, {}> {\n  render (): React.ReactNode {\n    if (this.props.metadata === undefined) {\n      return null\n    }\n    const attributes = [\n      {\n        name: 'Manufacturer',\n        value: this.props.metadata.Manufacturer\n      },\n      {\n        name: 'Model Name',\n        value: this.props.metadata.ManufacturerModelName\n      },\n      {\n        name: 'Device Serial Number',\n        value: this.props.metadata.DeviceSerialNumber\n      },\n      {\n        name: 'Software Versions',\n        value: this.props.metadata.SoftwareVersions\n      }\n    ]\n    if (this.props.metadata.InstitutionName != null) {\n      attributes.push({\n        name: 'Institution Name',\n        value: this.props.metadata.InstitutionName\n      })\n    }\n    return <Description attributes={attributes} hasLongValues />\n  }\n}\n\nexport default Equipment\n","import * as dcmjs from 'dcmjs'\n\n/**\n * Check whether a DICOM SR content item has a given name.\n *\n * @param item - Content item\n * @param name - Coded name that should be compared\n * @returns Whether the content item has the given name\n */\nconst hasName = (\n  item: dcmjs.sr.valueTypes.ContentItem,\n  name: dcmjs.sr.coding.CodedConcept\n): boolean => {\n  const concept = item.ConceptNameCodeSequence[0]\n  return (\n    concept.CodeValue === name.CodeValue &&\n    concept.CodingSchemeDesignator === name.CodingSchemeDesignator\n  )\n}\n\n/**\n * Check whether a DICOM SR content item has a given value type.\n *\n * @param item - Content item\n * @param valueType - Value Type\n * @returns Whether the content item has the given value type\n */\nconst hasValueType = (\n  item: dcmjs.sr.valueTypes.ContentItem,\n  valueType: dcmjs.sr.valueTypes.ValueTypes\n): boolean => {\n  console.log(item.ValueType, valueType)\n  return item.ValueType === valueType\n}\n\n/**\n * Find content items in a DICOM SR document given their name.\n *\n * Only finds content items at the root level, but not any nested content items.\n *\n * @param content - Document content, i.e., sequence of content items\n * @param name - Coded name that should be compared\n * @returns Matched content items\n */\nexport const findContentItemsByName = (\n  { content, name }: {\n    content: dcmjs.sr.valueTypes.ContentItem[]\n    name: dcmjs.sr.coding.CodedConcept\n  }\n): dcmjs.sr.valueTypes.ContentItem[] => {\n  const items: dcmjs.sr.valueTypes.ContentItem[] = []\n  content.forEach(i => {\n    if (hasName(i, name)) {\n      items.push(i)\n    }\n  })\n  return items\n}\n\n/**\n * Find content items in a DICOM SR document given their value type.\n *\n * Only finds content items at the root level, but not any nested content items.\n *\n * @param content - Document content, i.e., sequence of content items\n * @param valueType - Value Type\n * @returns Matched content items\n */\nexport const findContentItemsByValueType = (\n  { content, valueType }: {\n    content: dcmjs.sr.valueTypes.ContentItem[]\n    valueType: dcmjs.sr.valueTypes.ValueTypes\n  }\n): dcmjs.sr.valueTypes.ContentItem[] => {\n  const items: dcmjs.sr.valueTypes.ContentItem[] = []\n  content.forEach(i => {\n    if (hasValueType(i, valueType)) {\n      items.push(i)\n    }\n  })\n  return items\n}\n","import React from 'react'\nimport * as dmv from 'dicom-microscopy-viewer'\nimport * as dcmjs from 'dcmjs'\nimport { Divider } from 'antd'\nimport { v4 as generateUUID } from 'uuid'\n\nimport Description from './Description'\nimport Patient from './Patient'\nimport Study from './Study'\nimport { findContentItemsByName } from '../utils/sr'\nimport { CustomError, errorTypes } from '../utils/CustomError'\nimport NotificationMiddleware, {\n  NotificationMiddlewareContext\n} from '../services/NotificationMiddleware'\n\nexport const hasValueType = (\n  item: dcmjs.sr.valueTypes.ContentItem,\n  valueType: string\n): boolean => {\n  return item.ValueType === valueType\n}\n\nconst findMeasurementItems = (\n  { content }: { content: dcmjs.sr.valueTypes.ContentItem[] }\n): dcmjs.sr.valueTypes.NumContentItem[] => {\n  const items: dcmjs.sr.valueTypes.NumContentItem[] = []\n  content.forEach(i => {\n    if (hasValueType(i, dcmjs.sr.valueTypes.ValueTypes.NUM)) {\n      const measurement = i as dcmjs.sr.valueTypes.NumContentItem\n      items.push(measurement)\n    }\n  })\n  return items\n}\n\nconst findEvaluationItems = (\n  { content }: { content: dcmjs.sr.valueTypes.ContentItem[] }\n): dcmjs.sr.valueTypes.CodeContentItem[] => {\n  const items: dcmjs.sr.valueTypes.CodeContentItem[] = []\n  content.forEach(i => {\n    if (hasValueType(i, dcmjs.sr.valueTypes.ValueTypes.CODE)) {\n      const evaluation = i as dcmjs.sr.valueTypes.CodeContentItem\n      items.push(evaluation)\n    }\n  })\n  return items\n}\n\nconst getROIs = (report: dmv.metadata.Comprehensive3DSR): dmv.roi.ROI[] => {\n  // TID 1500 Measurement Report\n  const matches = findContentItemsByName({\n    content: report.ContentSequence,\n    name: new dcmjs.sr.coding.CodedConcept({\n      value: '126010',\n      schemeDesignator: 'DCM',\n      meaning: 'Imaging Measurements'\n    })\n  })\n  if (matches.length !== 1) {\n    NotificationMiddleware.onError(\n      NotificationMiddlewareContext.SLIM,\n      new CustomError(\n        errorTypes.ENCODINGANDDECODING,\n        'Content item \"Imaging Measurements\" not found.' +\n        'Content of Comprehensive 3D SR document is not structured based on ' +\n        'TID 1500 \"Measurement Report\".'\n      )\n    )\n  }\n  const measurementsItem = matches[0] as dcmjs.sr.valueTypes.ContainerContentItem\n  // TID 1410 Planar ROI Measurements and Qualitative Evaluations\n  const measurementGroupItems = findContentItemsByName({\n    content: measurementsItem.ContentSequence,\n    name: new dcmjs.sr.coding.CodedConcept({\n      value: '125007',\n      schemeDesignator: 'DCM',\n      meaning: 'Measurement Group'\n    })\n  })\n\n  const rois: dmv.roi.ROI[] = []\n  measurementGroupItems.forEach((item) => {\n    const evaluations = []\n    let observerType: string\n    const group = item as dcmjs.sr.valueTypes.ContainerContentItem\n    let items = findContentItemsByName({\n      content: group.ContentSequence,\n      name: new dcmjs.sr.coding.CodedConcept({\n        value: '112040',\n        schemeDesignator: 'DCM',\n        meaning: 'Tracking Unique Identifier'\n      })\n    })\n    if (items.length === 0) {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.ENCODINGANDDECODING,\n          'Content item \"Tracking Unique Identifier\" not found. ' +\n          'Content of Comprehensive 3D SR document is not structured ' +\n          'based on TID 1500 \"Measurement Report\" -> ' +\n          'TID 1410 \"Planar ROI Measurements and Qualitative Evaluations\".'\n        )\n      )\n    }\n    const trackingUIDItem = items[0] as dcmjs.sr.valueTypes.UIDRefContentItem\n\n    items = findContentItemsByName({\n      content: group.ContentSequence,\n      name: new dcmjs.sr.coding.CodedConcept({\n        value: '121071',\n        schemeDesignator: 'DCM',\n        meaning: 'Finding'\n      })\n    })\n    if (items.length === 0) {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.ENCODINGANDDECODING,\n          'Content item \"Finding\" not found. ' +\n          'Content of Comprehensive 3D SR document is not structured ' +\n          'based on TID 1500 \"Measurement Report\" -> ' +\n          'TID 1410 \"Planar ROI Measurements and Qualitative Evaluations\".'\n        )\n      )\n    }\n\n    items = findContentItemsByName({\n      content: group.ContentSequence,\n      name: new dcmjs.sr.coding.CodedConcept({\n        value: '111001',\n        schemeDesignator: 'DCM',\n        meaning: 'Algorithm Name'\n      })\n    })\n    if (items.length !== 0) {\n      const algorithmNameItem = items[0] as dcmjs.sr.valueTypes.CodeContentItem\n      evaluations.push(algorithmNameItem)\n      observerType = 'Device'\n    } else {\n      observerType = 'Person'\n    }\n\n    items = findContentItemsByName({\n      content: group.ContentSequence,\n      name: new dcmjs.sr.coding.CodedConcept({\n        value: '111003',\n        schemeDesignator: 'DCM',\n        meaning: 'Algorithm Version'\n      })\n    })\n    if (items.length !== 0) {\n      const algorithmVersionItem = items[0] as dcmjs.sr.valueTypes.CodeContentItem\n      evaluations.push(algorithmVersionItem)\n    }\n\n    items = findContentItemsByName({\n      content: group.ContentSequence,\n      name: new dcmjs.sr.coding.CodedConcept({\n        value: '111030',\n        schemeDesignator: 'DCM',\n        meaning: 'Image Region'\n      })\n    })\n    if (items.length === 0) {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.ENCODINGANDDECODING,\n          'Content item \"Image Region\" not found. ' +\n          'Content of Comprehensive 3D SR document is not structured ' +\n          'based on TID 1500 \"Measurement Report\" -> ' +\n          'TID 1410 \"Planar ROI Measurements and Qualitative Evaluations\".'\n        )\n      )\n    }\n    const regionItem = items[0] as dcmjs.sr.valueTypes.Scoord3DContentItem\n    let scoord3d: any\n    if (regionItem.GraphicType === 'POINT') {\n      scoord3d = new dmv.scoord3d.Point({\n        frameOfReferenceUID: regionItem.ReferencedFrameOfReferenceUID,\n        coordinates: regionItem.GraphicData\n      })\n    } else {\n      const coordinates: number[][] = []\n      for (let i = 0; i < regionItem.GraphicData.length; i += 3) {\n        coordinates.push(regionItem.GraphicData.slice(i, i + 3))\n      }\n      if (regionItem.GraphicType === 'POLYGON') {\n        scoord3d = new dmv.scoord3d.Polygon({\n          frameOfReferenceUID: regionItem.ReferencedFrameOfReferenceUID,\n          coordinates: coordinates\n        })\n      } else if (regionItem.GraphicType === 'MULTIPOINT') {\n        scoord3d = new dmv.scoord3d.MultiPoint({\n          frameOfReferenceUID: regionItem.ReferencedFrameOfReferenceUID,\n          coordinates: coordinates\n        })\n      } else if (regionItem.GraphicType === 'POLYLINE') {\n        scoord3d = new dmv.scoord3d.Polyline({\n          frameOfReferenceUID: regionItem.ReferencedFrameOfReferenceUID,\n          coordinates: coordinates\n        })\n      } else if (regionItem.GraphicType === 'ELLIPSE') {\n        scoord3d = new dmv.scoord3d.Ellipse({\n          frameOfReferenceUID: regionItem.ReferencedFrameOfReferenceUID,\n          coordinates: coordinates\n        })\n      } else if (regionItem.GraphicType === 'ELLIPSOID') {\n        scoord3d = new dmv.scoord3d.Ellipsoid({\n          frameOfReferenceUID: regionItem.ReferencedFrameOfReferenceUID,\n          coordinates: coordinates\n        })\n      } else {\n        NotificationMiddleware.onError(\n          NotificationMiddlewareContext.SLIM,\n          new CustomError(\n            errorTypes.ENCODINGANDDECODING,\n            'Content item \"Image Region\" has unknown graphic type ' +\n            `\"${regionItem.GraphicType}\". ` +\n            'Content of Comprehensive 3D SR document is not structured ' +\n            'based on TID 1500 \"Measurement Report\" -> ' +\n            'TID 1410 \"Planar ROI Measurements and Qualitative Evaluations\".'\n          )\n        )\n      }\n    }\n\n    evaluations.push(\n      ...findEvaluationItems({ content: group.ContentSequence })\n    )\n    const measurements = findMeasurementItems({\n      content: group.ContentSequence\n    })\n\n    const roi = new dmv.roi.ROI({\n      scoord3d: scoord3d,\n      uid: generateUUID(),\n      properties: {\n        trackingUID: trackingUIDItem.UID,\n        observerType: observerType,\n        evaluations: evaluations,\n        measurements: measurements\n      }\n    })\n    rois.push(roi)\n  })\n  return rois\n}\n\nclass MeasurementReport {\n  public PersonObserverName?: string\n\n  public PersonObserverLoginName?: string\n\n  public DeviceObserverUID?: string\n\n  public DeviceObserverName?: string\n\n  public SpecimenUID: string\n\n  public SpecimenIdentifier: string\n\n  public ContainerIdentifier: string\n\n  public ROIs: dmv.roi.ROI[] = []\n\n  constructor (report: dmv.metadata.Comprehensive3DSR) {\n    let items = findContentItemsByName({\n      content: report.ContentSequence,\n      name: new dcmjs.sr.coding.CodedConcept({\n        value: '121039',\n        schemeDesignator: 'DCM',\n        meaning: 'Specimen UID'\n      })\n    })\n    if (items.length === 0) {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.ENCODINGANDDECODING,\n          'Content item \"Specimen UID\" not found. ' +\n          'Content of Comprehensive 3D SR document is not structured based on ' +\n          'TID 1500 \"Measurement Report\" -> TID 1001 \"Observation Context\" -> ' +\n          'TID 1006 \"Subject Context\" -> TID 1009 \"Subject Context, Specimen\".'\n        )\n      )\n    }\n    const specimenUIDItem = (\n      items[0] as unknown as dcmjs.sr.valueTypes.UIDRefContentItem\n    )\n    this.SpecimenUID = specimenUIDItem.UID\n\n    items = findContentItemsByName({\n      content: report.ContentSequence,\n      name: new dcmjs.sr.coding.CodedConcept({\n        value: '121041',\n        schemeDesignator: 'DCM',\n        meaning: 'Specimen Identifier'\n      })\n    })\n    if (items.length === 0) {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.ENCODINGANDDECODING,\n          'Content item \"Specimen Identifier\" not found. ' +\n          'Content of Comprehensive 3D SR document is not structured based on ' +\n          'TID 1500 \"Measurement Report\" -> TID 1001 \"Observation Context\" -> ' +\n          'TID 1006 \"Subject Context\" -> TID 1009 \"Subject Context, Specimen\".'\n        )\n      )\n    }\n    const specimenIdItem = (\n      items[0] as unknown as dcmjs.sr.valueTypes.TextContentItem\n    )\n    this.SpecimenIdentifier = specimenIdItem.TextValue\n\n    items = findContentItemsByName({\n      content: report.ContentSequence,\n      name: new dcmjs.sr.coding.CodedConcept({\n        value: '111700',\n        schemeDesignator: 'DCM',\n        meaning: 'Specimen Container Identifier'\n      })\n    })\n    if (items.length === 0) {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.ENCODINGANDDECODING,\n          'Content item \"Specimen Container Identifier\" not found. ' +\n          'Content of Comprehensive 3D SR document is not structured based on ' +\n          'TID 1500 \"Measurement Report\" -> TID 1001 \"Observation Context\" -> ' +\n          'TID 1006 \"Subject Context\" -> TID 1009 \"Subject Context, Specimen\".'\n        )\n      )\n    }\n    const containerIdItem = (\n      items[0] as unknown as dcmjs.sr.valueTypes.TextContentItem\n    )\n    this.ContainerIdentifier = containerIdItem.TextValue\n\n    items = findContentItemsByName({\n      content: report.ContentSequence,\n      name: new dcmjs.sr.coding.CodedConcept({\n        value: '121008',\n        schemeDesignator: 'DCM',\n        meaning: 'Person Observer Name'\n      })\n    })\n    if (items.length !== 0) {\n      const personNameItem = (\n        items[0] as unknown as dcmjs.sr.valueTypes.PNameContentItem\n      )\n      this.PersonObserverName = personNameItem.PersonName\n    }\n\n    items = findContentItemsByName({\n      content: report.ContentSequence,\n      name: new dcmjs.sr.coding.CodedConcept({\n        value: '128774',\n        schemeDesignator: 'DCM',\n        meaning: \"Person Observer's Login Name\"\n      })\n    })\n    if (items.length !== 0) {\n      const personLoginNameItem = (\n        items[0] as unknown as dcmjs.sr.valueTypes.TextContentItem\n      )\n      this.PersonObserverLoginName = personLoginNameItem.TextValue\n    }\n\n    items = findContentItemsByName({\n      content: report.ContentSequence,\n      name: new dcmjs.sr.coding.CodedConcept({\n        value: '121012',\n        schemeDesignator: 'DCM',\n        meaning: 'Device Observer UID'\n      })\n    })\n    if (items.length > 0) {\n      const deviceUIDItem = (\n        items[0] as unknown as dcmjs.sr.valueTypes.UIDRefContentItem\n      )\n      this.DeviceObserverUID = deviceUIDItem.UID\n    }\n\n    items = findContentItemsByName({\n      content: report.ContentSequence,\n      name: new dcmjs.sr.coding.CodedConcept({\n        value: '121013',\n        schemeDesignator: 'DCM',\n        meaning: 'Device Observer Name'\n      })\n    })\n    if (items.length !== 0) {\n      const deviceNameItem = (\n        items[0] as unknown as dcmjs.sr.valueTypes.TextContentItem\n      )\n      this.DeviceObserverName = deviceNameItem.TextValue\n    }\n\n    this.ROIs = getROIs(report)\n  }\n}\n\ninterface ReportProps {\n  dataset: dmv.metadata.Comprehensive3DSR\n}\n\n/**\n * React component representing a DICOM SR document that displays the\n * document content (a selected subset of content items).\n */\nclass Report extends React.Component<ReportProps, {}> {\n  render (): React.ReactNode {\n    const report = new MeasurementReport(this.props.dataset)\n    const containerAttrs = [\n      {\n        name: 'ID',\n        value: report.ContainerIdentifier\n      }\n    ]\n    const specimenAttrs = [\n      {\n        name: 'ID',\n        value: report.SpecimenIdentifier\n      }\n    ]\n    const observerAttrs = [\n      {\n        name: 'Name',\n        value: report.PersonObserverName\n      }\n    ]\n    const annotations = report.ROIs.map(\n      (roi, index): React.ReactNode => {\n        const id = `Region ${index + 1}`\n        const attrs: Array<{ name: string, value: string }> = []\n        roi.evaluations.forEach((\n          item: (\n            dcmjs.sr.valueTypes.CodeContentItem |\n            dcmjs.sr.valueTypes.TextContentItem\n          )\n        ) => {\n          if (item.ValueType === dcmjs.sr.valueTypes.ValueTypes.CODE) {\n            item = item as dcmjs.sr.valueTypes.CodeContentItem\n            attrs.push({\n              name: item.ConceptNameCodeSequence[0].CodeMeaning,\n              value: item.ConceptCodeSequence[0].CodeMeaning\n            })\n          } else if (item.ValueType === dcmjs.sr.valueTypes.ValueTypes.TEXT) {\n            item = item as dcmjs.sr.valueTypes.TextContentItem\n            attrs.push({\n              name: item.ConceptNameCodeSequence[0].CodeMeaning,\n              value: item.TextValue\n            })\n          }\n        })\n        return <Description key={roi.uid} header={id} attributes={attrs} />\n      }\n    )\n\n    return (\n      <div>\n        <Divider orientation='left'>Patient</Divider>\n        <Patient metadata={this.props.dataset} />\n        <Divider orientation='left'>Case</Divider>\n        <Study metadata={this.props.dataset} />\n        <Divider orientation='left'>Slide</Divider>\n        <Description attributes={containerAttrs} />\n        <Divider orientation='left'>Specimen</Divider>\n        <Description attributes={specimenAttrs} />\n        <Divider orientation='left'>Observer</Divider>\n        <Description attributes={observerAttrs} />\n        <Divider orientation='left'>Annotations</Divider>\n        {annotations}\n      </div>\n    )\n  }\n}\n\nexport default Report\nexport { MeasurementReport }\n","import React from 'react'\nimport { List } from 'antd'\n\nimport Description, { Attribute, AttributeGroup } from './Description'\n\ninterface ItemProps {\n  uid: string\n  identifier: string\n  attributes: Attribute[]\n  groups?: AttributeGroup[]\n  children?: React.ReactElement[]\n  type?: string\n  hasLongValues?: boolean\n}\n\n/**\n * React component for a list item that consists of a header element\n * containing an identifier and a body element containing a description list\n * of attributes rendered as name-value pairs.\n */\nclass Item extends React.Component<ItemProps, {}> {\n  render (): React.ReactNode {\n    let groups = null\n    if (this.props.groups !== undefined) {\n      groups = this.props.groups.map((item, index: number) => (\n        <Description\n          key={index}\n          header={item.name}\n          attributes={item.attributes}\n        />\n      ))\n    }\n    let title\n    if (this.props.type !== undefined) {\n      title = `${this.props.type}: ${this.props.identifier}`\n    } else {\n      title = this.props.identifier\n    }\n    return (\n      <List.Item key={this.props.uid}>\n        <Description\n          header={title}\n          attributes={this.props.attributes}\n          hasLongValues={this.props.hasLongValues}\n        >\n          {groups}\n        </Description>\n        {this.props.children}\n      </List.Item>\n    )\n  }\n}\n\nexport default Item\n","import * as dcmjs from 'dcmjs'\n\nexport const SpecimenPreparationTypes: {\n  [key: string]: dcmjs.sr.coding.CodedConcept\n} = {\n  COLLECTION: new dcmjs.sr.coding.CodedConcept({\n    value: '17636008',\n    schemeDesignator: 'SCT',\n    meaning: 'Specimen collection'\n  }),\n  SAMPLING: new dcmjs.sr.coding.CodedConcept({\n    value: '433465004',\n    schemeDesignator: 'SCT',\n    meaning: 'Sampling of tissue specimen'\n  }),\n  STAINING: new dcmjs.sr.coding.CodedConcept({\n    value: '127790008',\n    schemeDesignator: 'SCT',\n    meaning: 'Specimen staining'\n  }),\n  PROCESSING: new dcmjs.sr.coding.CodedConcept({\n    value: '9265001',\n    schemeDesignator: 'SCT',\n    meaning: 'Specimen processing'\n  })\n}\n\nexport const SpecimenPreparationAdditives: {\n  [key: string]: dcmjs.sr.coding.CodedConcept\n} = {\n  FIXATIVE: new dcmjs.sr.coding.CodedConcept({\n    value: '430864009',\n    schemeDesignator: 'SCT',\n    meaning: 'Tissue fixative'\n  }),\n  EMBEDDING_MEDIUM: new dcmjs.sr.coding.CodedConcept({\n    value: '430863003',\n    schemeDesignator: 'SCT',\n    meaning: 'Embedding medium'\n  })\n}\n\nexport const SpecimenPreparationStepItems: {\n  [key: string]: dcmjs.sr.coding.CodedConcept\n} = {\n  SPECIMEN_IDENTIFIER: new dcmjs.sr.coding.CodedConcept({\n    value: '121041',\n    schemeDesignator: 'DCM',\n    meaning: 'Specimen identifier'\n  }),\n  PARENT_SPECIMEN_IDENTIFIER: new dcmjs.sr.coding.CodedConcept({\n    value: '111705',\n    schemeDesignator: 'DCM',\n    meaning: 'Parent specimen identifier'\n  }),\n  PROCESSING_TYPE: new dcmjs.sr.coding.CodedConcept({\n    value: '111701',\n    schemeDesignator: 'DCM',\n    meaning: 'Processing type'\n  }),\n  DATETIME_OF_PROCESSING: new dcmjs.sr.coding.CodedConcept({\n    value: '111702',\n    schemeDesignator: 'DCM',\n    meaning: 'Datetime of processing'\n  }),\n  PROCESSING_STEP_DESCRIPTION: new dcmjs.sr.coding.CodedConcept({\n    value: '111703',\n    schemeDesignator: 'DCM',\n    meaning: 'Processing step description'\n  }),\n  COLLECTION_METHOD: new dcmjs.sr.coding.CodedConcept({\n    value: '17636008',\n    schemeDesignator: 'SCT',\n    meaning: 'Specimen collection'\n  }),\n  SAMPLING_METHOD: new dcmjs.sr.coding.CodedConcept({\n    value: '111704',\n    schemeDesignator: 'DCM',\n    meaning: 'Sampling method'\n  }),\n  STAIN: new dcmjs.sr.coding.CodedConcept({\n    value: '424361007',\n    schemeDesignator: 'SCT',\n    meaning: 'Using substance'\n  }),\n  ...SpecimenPreparationAdditives\n}\n","import React from 'react'\nimport * as dmv from 'dicom-microscopy-viewer'\nimport * as dcmjs from 'dcmjs'\n\nimport Item from './Item'\nimport { Attribute } from './Description'\nimport { SpecimenPreparationStepItems } from '../data/specimens'\n\ninterface SpecimenItemProps {\n  index: number\n  metadata?: dmv.metadata.VLWholeSlideMicroscopyImage\n  showstain: boolean\n}\n\n/**\n * React component representing a DICOM Specimen Information Entity and\n * displays specimen-related attributes of a DICOM Slide Microscopy image.\n */\nclass SpecimenItem extends React.Component<SpecimenItemProps, {}> {\n  render (): React.ReactNode {\n    if (this.props.metadata === undefined) {\n      return null\n    }\n    const specimenDescription = this.props.metadata.SpecimenDescriptionSequence[\n      this.props.index\n    ]\n    const attributes: Attribute[] = []\n    if (specimenDescription.SpecimenShortDescription !== undefined) {\n      attributes.push({\n        name: 'Description',\n        value: specimenDescription.SpecimenShortDescription\n      })\n    }\n    if (specimenDescription.PrimaryAnatomicStructureSequence !== undefined) {\n      if (specimenDescription.PrimaryAnatomicStructureSequence.length > 0) {\n        const structures = specimenDescription.PrimaryAnatomicStructureSequence\n        attributes.push({\n          name: 'Anatomical structure',\n          value: structures.map(item => item.CodeMeaning).join(', ')\n        })\n      }\n    }\n\n    // TID 8001 \"Specimen Preparation\"\n    const preparationSteps: dmv.metadata.SpecimenPreparation[] = (\n      specimenDescription.SpecimenPreparationSequence ?? []\n    )\n    preparationSteps.forEach(\n      (step: dmv.metadata.SpecimenPreparation, index: number): void => {\n        step.SpecimenPreparationStepContentItemSequence.forEach((\n          item: (\n            dcmjs.sr.valueTypes.CodeContentItem |\n            dcmjs.sr.valueTypes.TextContentItem |\n            dcmjs.sr.valueTypes.UIDRefContentItem |\n            dcmjs.sr.valueTypes.PNameContentItem |\n            dcmjs.sr.valueTypes.DateTimeContentItem\n          ),\n          index: number\n        ) => {\n          const name = new dcmjs.sr.coding.CodedConcept({\n            value: item.ConceptNameCodeSequence[0].CodeValue,\n            schemeDesignator:\n              item.ConceptNameCodeSequence[0].CodingSchemeDesignator,\n            meaning: item.ConceptNameCodeSequence[0].CodeMeaning\n          })\n          if (item.ValueType === dcmjs.sr.valueTypes.ValueTypes.CODE) {\n            item = item as dcmjs.sr.valueTypes.CodeContentItem\n            const value = new dcmjs.sr.coding.CodedConcept({\n              value: item.ConceptCodeSequence[0].CodeValue,\n              schemeDesignator:\n                item.ConceptCodeSequence[0].CodingSchemeDesignator,\n              meaning: item.ConceptCodeSequence[0].CodeMeaning\n            })\n            if (!name.equals(SpecimenPreparationStepItems.PROCESSING_TYPE)) {\n              if (\n                name.equals(SpecimenPreparationStepItems.COLLECTION_METHOD)\n              ) {\n                attributes.push({\n                  name: 'Collection method',\n                  value: value.CodeMeaning\n                })\n              } else if (\n                name.equals(SpecimenPreparationStepItems.FIXATIVE)\n              ) {\n                attributes.push({\n                  name: 'Tissue fixative',\n                  value: value.CodeMeaning\n                })\n              } else if (\n                name.equals(SpecimenPreparationStepItems.EMBEDDING_MEDIUM)\n              ) {\n                attributes.push({\n                  name: 'Tissue embedding medium',\n                  value: value.CodeMeaning\n                })\n              } else if (\n                name.equals(SpecimenPreparationStepItems.STAIN) &&\n                this.props.showstain\n              ) {\n                attributes.push({\n                  name: 'Tissue stain',\n                  value: value.CodeMeaning\n                })\n              }\n            }\n          } else if (item.ValueType === dcmjs.sr.valueTypes.ValueTypes.TEXT) {\n            item = item as dcmjs.sr.valueTypes.TextContentItem\n            if (\n              name.equals(SpecimenPreparationStepItems.STAIN) &&\n              this.props.showstain\n            ) {\n              attributes.push({\n                name: 'Tissue stain',\n                value: item.TextValue\n              })\n            } else if (\n              name.equals(SpecimenPreparationStepItems.PARENT_SPECIMEN_IDENTIFIER)\n            ) {\n              attributes.push({\n                name: 'Parent specimen',\n                value: item.TextValue\n              })\n            }\n          }\n        })\n      }\n    )\n    const uid = specimenDescription.SpecimenUID\n    const identifier = specimenDescription.SpecimenIdentifier\n    return (\n      <Item\n        uid={uid}\n        key={uid}\n        identifier={identifier}\n        attributes={attributes}\n        hasLongValues\n      />\n    )\n  }\n}\n\nexport default SpecimenItem\n","import React from 'react'\nimport * as dmv from 'dicom-microscopy-viewer'\nimport { List } from 'antd'\n\nimport SpecimenItem from './SpecimenItem'\n\ninterface SpecimenListProps {\n  metadata?: dmv.metadata.VLWholeSlideMicroscopyImage\n  showstain: boolean\n}\n\n/**\n * React component representing a list of DICOM Specimen Information Entities.\n */\nclass SpecimenList extends React.Component<SpecimenListProps, {}> {\n  render (): React.ReactNode {\n    if (this.props.metadata === undefined) {\n      return null\n    }\n    /*\n     * Specimen Description Sequence is a type 1 attribute. However, it is\n     * nevertheless missing in some data sets. This is a violation of the\n     * standard, but it may be better to facilitate display of the data.\n     */\n    const descriptions = this.props.metadata.SpecimenDescriptionSequence ?? []\n    const items = descriptions.map(\n      (item: dmv.metadata.SpecimenDescription, index: number) => {\n        return (\n          <SpecimenItem\n            index={index}\n            key={item.SpecimenUID}\n            metadata={this.props.metadata}\n            showstain={this.props.showstain}\n          />\n        )\n      }\n    )\n    return (\n      <List style={{ overflowY: 'auto' }}>\n        {items}\n      </List>\n    )\n  }\n}\n\nexport default SpecimenList\n","import React from 'react'\nimport {\n  Badge,\n  Button,\n  Col,\n  Divider,\n  InputNumber,\n  Menu,\n  Popover,\n  Row,\n  Slider,\n  Space,\n  Switch,\n  Tooltip\n} from 'antd'\nimport {\n  DeleteOutlined,\n  EyeOutlined,\n  EyeInvisibleOutlined,\n  SettingOutlined\n} from '@ant-design/icons'\nimport Description from './Description'\nimport * as dmv from 'dicom-microscopy-viewer'\nimport * as dcmjs from 'dcmjs'\n\nimport { SpecimenPreparationStepItems } from '../data/specimens'\nimport NotificationMiddleware, {\n  NotificationMiddlewareContext\n} from '../services/NotificationMiddleware'\nimport { CustomError, errorTypes } from '../utils/CustomError'\n\ninterface OpticalPathItemProps {\n  opticalPath: dmv.opticalPath.OpticalPath\n  metadata: dmv.metadata.VLWholeSlideMicroscopyImage[]\n  isVisible: boolean\n  isRemovable: boolean\n  defaultStyle: {\n    opacity: number\n    color?: number[]\n    paletteColorLookupTable?: dmv.color.PaletteColorLookupTable\n    limitValues?: number[]\n  }\n  onVisibilityChange: ({ opticalPathIdentifier, isVisible }: {\n    opticalPathIdentifier: string\n    isVisible: boolean\n  }) => void\n  onStyleChange: ({ opticalPathIdentifier, styleOptions }: {\n    opticalPathIdentifier: string\n    styleOptions: {\n      opacity?: number\n      color?: number[]\n      paletteColorLookupTable?: dmv.color.PaletteColorLookupTable\n      limitValues?: number[]\n    }\n  }) => void\n  onRemoval: (opticalPathIdentifier: string) => void\n}\n\ninterface OpticalPathItemState {\n  isVisible: boolean\n  currentStyle: {\n    opacity: number\n    color?: number[]\n    paletteColorLookupTable?: dmv.color.PaletteColorLookupTable\n    limitValues?: number[]\n  }\n}\n\n/**\n * React component representing an optical path of a\n * multi-channel acquistion with control of visualization parameters.\n */\nclass OpticalPathItem extends React.Component<OpticalPathItemProps, OpticalPathItemState> {\n  constructor (props: OpticalPathItemProps) {\n    super(props)\n    this.handleVisibilityChange = this.handleVisibilityChange.bind(this)\n    this.handleOpacityChange = this.handleOpacityChange.bind(this)\n    this.handleLimitChange = this.handleLimitChange.bind(this)\n    this.handleLowerLimitChange = this.handleLowerLimitChange.bind(this)\n    this.handleUpperLimitChange = this.handleUpperLimitChange.bind(this)\n    this.handleColorRChange = this.handleColorRChange.bind(this)\n    this.handleColorGChange = this.handleColorGChange.bind(this)\n    this.handleColorBChange = this.handleColorBChange.bind(this)\n    this.handleRemoval = this.handleRemoval.bind(this)\n    this.getCurrentColors = this.getCurrentColors.bind(this)\n    this.state = {\n      isVisible: this.props.isVisible,\n      currentStyle: {\n        opacity: this.props.defaultStyle.opacity,\n        color: this.props.defaultStyle.color,\n        paletteColorLookupTable: this.props.defaultStyle.paletteColorLookupTable,\n        limitValues: this.props.defaultStyle.limitValues\n      }\n    }\n  }\n\n  componentDidUpdate (\n    previousProps: OpticalPathItemProps,\n    previousState: OpticalPathItemState\n  ): void {\n    if (this.props.defaultStyle !== previousProps.defaultStyle) {\n      this.setState({\n        currentStyle: this.props.defaultStyle\n      })\n    }\n  }\n\n  handleVisibilityChange (\n    checked: boolean,\n    event: React.MouseEvent<HTMLButtonElement>\n  ): void {\n    const identifier = this.props.opticalPath.identifier\n    this.setState({\n      isVisible: checked\n    })\n    this.props.onVisibilityChange({\n      opticalPathIdentifier: identifier,\n      isVisible: checked\n    })\n  }\n\n  handleOpacityChange (\n    value: number | null\n  ): void {\n    if (value != null) {\n      const identifier = this.props.opticalPath.identifier\n      this.props.onStyleChange({\n        opticalPathIdentifier: identifier,\n        styleOptions: { opacity: value }\n      })\n      this.setState(state => ({\n        currentStyle: {\n          color: state.currentStyle.color,\n          paletteColorLookupTable: state.currentStyle.paletteColorLookupTable,\n          opacity: value,\n          limitValues: state.currentStyle.limitValues\n        }\n      }))\n    }\n  }\n\n  handleColorRChange (\n    value: number | number[] | null\n  ): void {\n    const identifier = this.props.opticalPath.identifier\n    if (value != null && this.state.currentStyle.color !== undefined) {\n      const color = [\n        Array.isArray(value) ? value[0] : value,\n        this.state.currentStyle.color[1],\n        this.state.currentStyle.color[2]\n      ]\n      this.setState(state => ({\n        currentStyle: {\n          color: color,\n          paletteColorLookupTable: state.currentStyle.paletteColorLookupTable,\n          opacity: state.currentStyle.opacity,\n          limitValues: state.currentStyle.limitValues\n        }\n      }))\n      this.props.onStyleChange({\n        opticalPathIdentifier: identifier,\n        styleOptions: { color: color }\n      })\n    }\n  }\n\n  handleColorGChange (\n    value: number | number[] | null\n  ): void {\n    const identifier = this.props.opticalPath.identifier\n    if (value != null && this.state.currentStyle.color !== undefined) {\n      const color = [\n        this.state.currentStyle.color[0],\n        Array.isArray(value) ? value[0] : value,\n        this.state.currentStyle.color[2]\n      ]\n      this.setState(state => ({\n        currentStyle: {\n          color: color,\n          paletteColorLookupTable: state.currentStyle.paletteColorLookupTable,\n          opacity: state.currentStyle.opacity,\n          limitValues: state.currentStyle.limitValues\n        }\n      }))\n      this.props.onStyleChange({\n        opticalPathIdentifier: identifier,\n        styleOptions: { color: color }\n      })\n    }\n  }\n\n  handleColorBChange (\n    value: number | number[] | null\n  ): void {\n    const identifier = this.props.opticalPath.identifier\n    if (value != null && this.state.currentStyle.color !== undefined) {\n      const color = [\n        this.state.currentStyle.color[0],\n        this.state.currentStyle.color[1],\n        Array.isArray(value) ? value[0] : value\n      ]\n      this.setState(state => ({\n        currentStyle: {\n          color: color,\n          paletteColorLookupTable: state.currentStyle.paletteColorLookupTable,\n          opacity: state.currentStyle.opacity,\n          limitValues: state.currentStyle.limitValues\n        }\n      }))\n      this.props.onStyleChange({\n        opticalPathIdentifier: identifier,\n        styleOptions: { color: color }\n      })\n    }\n  }\n\n  getCurrentColors (): string[] {\n    const rgb2hex = (values: number[]): string => {\n      const r = values[0]\n      const g = values[1]\n      const b = values[2]\n      return '#' + (0x1000000 + (r << 16) + (g << 8) + b).toString(16).slice(1)\n    }\n\n    if (this.props.defaultStyle.paletteColorLookupTable != null) {\n      const colormap = this.props.defaultStyle.paletteColorLookupTable.data\n      return colormap.map(values => rgb2hex(values))\n    } else if (this.state.currentStyle.color != null) {\n      return [\n        '#000000',\n        rgb2hex(this.state.currentStyle.color)\n      ]\n    } else {\n      return ['white', 'white']\n    }\n  }\n\n  handleLowerLimitChange (\n    value: number | null\n  ): void {\n    const identifier = this.props.opticalPath.identifier\n    if (value != null && this.state.currentStyle.limitValues !== undefined) {\n      this.setState(state => {\n        if (state.currentStyle.limitValues !== undefined) {\n          return {\n            currentStyle: {\n              color: state.currentStyle.color,\n              paletteColorLookupTable: state.currentStyle.paletteColorLookupTable,\n              opacity: state.currentStyle.opacity,\n              limitValues: [value, state.currentStyle.limitValues[1]]\n            }\n          }\n        } else {\n          return {\n            currentStyle: {\n              color: state.currentStyle.color,\n              paletteColorLookupTable: state.currentStyle.paletteColorLookupTable,\n              opacity: state.currentStyle.opacity,\n              limitValues: state.currentStyle.limitValues\n            }\n          }\n        }\n      })\n      this.props.onStyleChange({\n        opticalPathIdentifier: identifier,\n        styleOptions: {\n          limitValues: [\n            value,\n            this.state.currentStyle.limitValues[1]\n          ]\n        }\n      })\n    }\n  }\n\n  handleUpperLimitChange (\n    value: number | null\n  ): void {\n    const identifier = this.props.opticalPath.identifier\n    if (value != null && this.state.currentStyle.limitValues !== undefined) {\n      this.setState(state => {\n        if (state.currentStyle.limitValues !== undefined) {\n          return {\n            currentStyle: {\n              color: state.currentStyle.color,\n              paletteColorLookupTable: state.currentStyle.paletteColorLookupTable,\n              opacity: state.currentStyle.opacity,\n              limitValues: [state.currentStyle.limitValues[0], value]\n            }\n          }\n        } else {\n          return {\n            currentStyle: {\n              color: state.currentStyle.color,\n              paletteColorLookupTable: state.currentStyle.paletteColorLookupTable,\n              opacity: state.currentStyle.opacity,\n              limitValues: state.currentStyle.limitValues\n            }\n          }\n        }\n      })\n      this.props.onStyleChange({\n        opticalPathIdentifier: identifier,\n        styleOptions: {\n          limitValues: [\n            this.state.currentStyle.limitValues[0],\n            value\n          ]\n        }\n      })\n    }\n  }\n\n  handleLimitChange (\n    values: number[]\n  ): void {\n    const identifier = this.props.opticalPath.identifier\n    this.setState(state => ({\n      currentStyle: {\n        color: state.currentStyle.color,\n        paletteColorLookupTable: state.currentStyle.paletteColorLookupTable,\n        opacity: state.currentStyle.opacity,\n        limitValues: values\n      }\n    }))\n    this.props.onStyleChange({\n      opticalPathIdentifier: identifier,\n      styleOptions: { limitValues: values }\n    })\n  }\n\n  handleRemoval (): void {\n    const identifier = this.props.opticalPath.identifier\n    this.props.onRemoval(identifier)\n  }\n\n  render (): React.ReactNode {\n    const identifier = this.props.opticalPath.identifier\n    const description = this.props.opticalPath.description\n    const attributes: Array<{ name: string, value: string }> = []\n    if (this.props.opticalPath.illuminationWaveLength !== undefined) {\n      attributes.push(\n        {\n          name: 'Illumination wavelength',\n          value: `${this.props.opticalPath.illuminationWaveLength} nm`\n        }\n      )\n    }\n    if (this.props.opticalPath.illuminationColor !== undefined) {\n      attributes.push(\n        {\n          name: 'Illumination color',\n          value: this.props.opticalPath.illuminationColor.CodeMeaning\n        }\n      )\n    }\n\n    // TID 8001 \"Specimen Preparation\"\n    const specimenDescriptions: dmv.metadata.SpecimenDescription[] = (\n      this.props.metadata[0].SpecimenDescriptionSequence ?? []\n    )\n    try {\n      specimenDescriptions.forEach(description => {\n        const specimenPreparationSteps: dmv.metadata.SpecimenPreparation[] =\n          description.SpecimenPreparationSequence ?? []\n        specimenPreparationSteps.forEach(\n          (step: dmv.metadata.SpecimenPreparation, index: number): void => {\n            step.SpecimenPreparationStepContentItemSequence.forEach((\n              item: (\n                dcmjs.sr.valueTypes.CodeContentItem |\n                dcmjs.sr.valueTypes.TextContentItem |\n                dcmjs.sr.valueTypes.UIDRefContentItem |\n                dcmjs.sr.valueTypes.PNameContentItem |\n                dcmjs.sr.valueTypes.DateTimeContentItem\n              ),\n              index: number\n            ) => {\n              const name = new dcmjs.sr.coding.CodedConcept({\n                value: item.ConceptNameCodeSequence[0].CodeValue,\n                schemeDesignator:\n                    item.ConceptNameCodeSequence[0].CodingSchemeDesignator,\n                meaning: item.ConceptNameCodeSequence[0].CodeMeaning\n              })\n              if (item.ValueType === dcmjs.sr.valueTypes.ValueTypes.CODE) {\n                item = item as dcmjs.sr.valueTypes.CodeContentItem\n                const value = new dcmjs.sr.coding.CodedConcept({\n                  value: item.ConceptCodeSequence[0].CodeValue,\n                  schemeDesignator:\n                      item.ConceptCodeSequence[0].CodingSchemeDesignator,\n                  meaning: item.ConceptCodeSequence[0].CodeMeaning\n                })\n                if (!name.equals(SpecimenPreparationStepItems.PROCESSING_TYPE)) {\n                  if (name.equals(SpecimenPreparationStepItems.STAIN)) {\n                    attributes.push({\n                      name: 'Tissue stain',\n                      value: value.CodeMeaning\n                    })\n                  }\n                }\n              } else if (item.ValueType === dcmjs.sr.valueTypes.ValueTypes.TEXT) {\n                item = item as dcmjs.sr.valueTypes.TextContentItem\n                if (!name.equals(SpecimenPreparationStepItems.PROCESSING_TYPE)) {\n                  if (name.equals(SpecimenPreparationStepItems.STAIN)) {\n                    attributes.push({\n                      name: 'Tissue stain',\n                      value: item.TextValue\n                    })\n                  }\n                }\n              }\n            })\n          }\n        )\n      })\n    } catch (error: any) {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.DCMJS,\n        new CustomError(\n          errorTypes.ENCODINGANDDECODING,\n          error.message\n        )\n      )\n    }\n\n    const maxValue = Math.pow(2, this.props.metadata[0].BitsAllocated) - 1\n\n    const title = (\n      description != null ? `${identifier}: ${description}` : identifier\n    )\n    let settings\n    let item\n    if (this.props.opticalPath.isMonochromatic) {\n      // monochrome images that can be pseudo-colored\n      let colorSettings\n      if (this.state.currentStyle.color != null) {\n        colorSettings = (\n          <>\n            <Divider plain>\n              Color\n            </Divider>\n            <Row justify='center' align='middle' gutter={[8, 8]}>\n              <Col span={5}>\n                Red\n              </Col>\n              <Col span={14}>\n                <Slider\n                  range={false}\n                  min={0}\n                  max={255}\n                  step={1}\n                  value={this.state.currentStyle.color[0]}\n                  onChange={this.handleColorRChange}\n                />\n              </Col>\n              <Col span={5}>\n                <InputNumber\n                  min={0}\n                  max={255}\n                  size='small'\n                  style={{ width: '65px' }}\n                  value={this.state.currentStyle.color[0]}\n                  onChange={this.handleColorRChange}\n                />\n              </Col>\n            </Row>\n\n            <Row justify='center' align='middle' gutter={[8, 8]}>\n              <Col span={5}>\n                Green\n              </Col>\n              <Col span={14}>\n                <Slider\n                  range={false}\n                  min={0}\n                  max={255}\n                  step={1}\n                  value={this.state.currentStyle.color[1]}\n                  onChange={this.handleColorGChange}\n                />\n              </Col>\n              <Col span={5}>\n                <InputNumber\n                  min={0}\n                  max={255}\n                  size='small'\n                  style={{ width: '65px' }}\n                  value={this.state.currentStyle.color[1]}\n                  onChange={this.handleColorGChange}\n                />\n              </Col>\n            </Row>\n\n            <Row justify='center' align='middle' gutter={[8, 8]}>\n              <Col span={5}>\n                Blue\n              </Col>\n              <Col span={14}>\n                <Slider\n                  range={false}\n                  min={0}\n                  max={255}\n                  step={1}\n                  value={this.state.currentStyle.color[2]}\n                  onChange={this.handleColorBChange}\n                />\n              </Col>\n              <Col span={5}>\n                <InputNumber\n                  min={0}\n                  max={255}\n                  size='small'\n                  style={{ width: '65px' }}\n                  value={this.state.currentStyle.color[2]}\n                  onChange={this.handleColorBChange}\n                />\n              </Col>\n            </Row>\n          </>\n        )\n      } else {\n        colorSettings = (\n          <>\n            <Divider plain>\n              Color\n            </Divider>\n            Custom pseudo-coloring is disabled because pixels are colorized via\n            a provided palette color lookup table.\n          </>\n        )\n      }\n\n      let windowSettings\n      if (this.state.currentStyle.limitValues != null) {\n        windowSettings = (\n          <>\n            <Divider plain>\n              Values of interest\n            </Divider>\n            <Row justify='center' align='middle' gutter={[8, 8]}>\n              <Col span={6}>\n                <InputNumber\n                  min={0}\n                  max={this.state.currentStyle.limitValues[1]}\n                  size='small'\n                  style={{ width: '75px' }}\n                  value={this.state.currentStyle.limitValues[0]}\n                  onChange={this.handleLowerLimitChange}\n                />\n              </Col>\n              <Col span={12}>\n                <Slider\n                  range\n                  min={0}\n                  max={maxValue}\n                  step={1}\n                  value={[\n                    this.state.currentStyle.limitValues[0],\n                    this.state.currentStyle.limitValues[1]\n                  ]}\n                  onChange={this.handleLimitChange}\n                />\n              </Col>\n              <Col span={6}>\n                <InputNumber\n                  min={this.state.currentStyle.limitValues[0]}\n                  max={maxValue}\n                  size='small'\n                  style={{ width: '75px' }}\n                  value={this.state.currentStyle.limitValues[1]}\n                  onChange={this.handleUpperLimitChange}\n                />\n              </Col>\n            </Row>\n          </>\n        )\n      }\n      settings = (\n        <div>\n          {windowSettings}\n          {colorSettings}\n          <Divider plain />\n          <Row justify='center' align='middle' gutter={[8, 8]}>\n            <Col span={6}>\n              Opacity\n            </Col>\n            <Col span={12}>\n              <Slider\n                range={false}\n                min={0}\n                max={1}\n                step={0.01}\n                value={this.state.currentStyle.opacity}\n                onChange={this.handleOpacityChange}\n              />\n            </Col>\n            <Col span={6}>\n              <InputNumber\n                min={0}\n                max={1}\n                size='small'\n                step={0.1}\n                style={{ width: '65px' }}\n                value={this.state.currentStyle.opacity}\n                onChange={this.handleOpacityChange}\n              />\n            </Col>\n          </Row>\n        </div>\n      )\n      const colors = this.getCurrentColors()\n      item = (\n        <Badge\n          offset={[-20, 20]}\n          count={' '}\n          style={{\n            borderStyle: 'solid',\n            borderWidth: '1px',\n            borderColor: 'gray',\n            visibility: this.state.isVisible ? 'visible' : 'hidden',\n            backgroundImage: `linear-gradient(to right, ${colors.toString()})`\n          }}\n        >\n          <Description\n            header={title}\n            attributes={attributes}\n            selectable\n            hasLongValues\n          />\n        </Badge>\n      )\n    } else {\n      // color images\n      settings = (\n        <div>\n          <Row justify='center' align='middle' gutter={[8, 8]}>\n            <Col span={6}>\n              Opacity\n            </Col>\n            <Col span={12}>\n              <Slider\n                range={false}\n                min={0}\n                max={1}\n                step={0.01}\n                value={this.state.currentStyle.opacity}\n                onChange={this.handleOpacityChange}\n              />\n            </Col>\n            <Col span={6}>\n              <InputNumber\n                min={0}\n                max={1}\n                size='small'\n                step={0.1}\n                style={{ width: '60px' }}\n                value={this.state.currentStyle.opacity}\n                onChange={this.handleOpacityChange}\n              />\n            </Col>\n          </Row>\n        </div>\n      )\n      item = (\n        <Description\n          header={title}\n          attributes={attributes}\n          selectable\n          hasLongValues\n        />\n      )\n    }\n\n    const buttons = []\n    if (this.props.isRemovable) {\n      buttons.push(\n        <Tooltip title='Remove Optical Path'>\n          <Button\n            type='default'\n            shape='circle'\n            icon={<DeleteOutlined />}\n            onClick={this.handleRemoval}\n          />\n        </Tooltip>\n      )\n    }\n\n    const {\n      defaultStyle,\n      isRemovable,\n      isVisible,\n      metadata,\n      onVisibilityChange,\n      onStyleChange,\n      onRemoval,\n      opticalPath,\n      ...otherProps\n    } = this.props\n    return (\n      <Menu.Item\n        style={{ height: '100%', paddingLeft: '3px' }}\n        key={this.props.opticalPath.identifier}\n        {...otherProps}\n      >\n        <Space align='start'>\n          <div style={{ paddingLeft: '14px' }}>\n            <Space direction='vertical' align='end'>\n              <Switch\n                size='small'\n                checked={this.state.isVisible}\n                onChange={this.handleVisibilityChange}\n                checkedChildren={<EyeOutlined />}\n                unCheckedChildren={<EyeInvisibleOutlined />}\n              />\n              <Popover\n                placement='left'\n                content={settings}\n                overlayStyle={{ width: '350px' }}\n                title='Display Settings'\n              >\n                <Button\n                  type='primary'\n                  shape='circle'\n                  icon={<SettingOutlined />}\n                />\n              </Popover>\n              {buttons}\n            </Space>\n          </div>\n          {item}\n        </Space>\n      </Menu.Item>\n    )\n  }\n}\n\nexport default OpticalPathItem\n","import React from 'react'\nimport * as dmv from 'dicom-microscopy-viewer'\nimport { Button as Btn, Menu, Select, Space, Tooltip } from 'antd'\nimport { AppstoreAddOutlined } from '@ant-design/icons'\n\nimport OpticalPathItem from './OpticalPathItem'\n\nconst { Option } = Select\n\ninterface OpticalPathListProps {\n  opticalPaths: dmv.opticalPath.OpticalPath[]\n  metadata: {\n    [opticalPathIdentifier: string]: dmv.metadata.VLWholeSlideMicroscopyImage[]\n  }\n  visibleOpticalPathIdentifiers: Set<string>\n  activeOpticalPathIdentifiers: Set<string>\n  defaultOpticalPathStyles: {\n    [opticalPathIdentifier: string]: {\n      opacity: number\n      color?: number[]\n      limitValues?: number[]\n      paletteColorLookupTable?: dmv.color.PaletteColorLookupTable\n    }\n  }\n  onOpticalPathVisibilityChange: ({ opticalPathIdentifier, isVisible }: {\n    opticalPathIdentifier: string\n    isVisible: boolean\n  }) => void\n  onOpticalPathStyleChange: ({ opticalPathIdentifier, styleOptions }: {\n    opticalPathIdentifier: string\n    styleOptions: {\n      opacity?: number\n      color?: number[]\n      limitValues?: number[]\n    }\n  }) => void\n  onOpticalPathActivityChange: ({ opticalPathIdentifier, isActive }: {\n    opticalPathIdentifier: string\n    isActive: boolean\n  }) => void\n  selectedPresentationStateUID?: string\n}\n\ninterface OpticalPathListState {\n  selectedOpticalPathIdentifier?: string\n}\n\n/**\n * React component representing a list of optical paths.\n */\nclass OpticalPathList extends React.Component<OpticalPathListProps, OpticalPathListState> {\n  state = {\n    selectedOpticalPathIdentifier: undefined\n  }\n\n  constructor (props: OpticalPathListProps) {\n    super(props)\n    this.handleItemAddition = this.handleItemAddition.bind(this)\n    this.handleItemRemoval = this.handleItemRemoval.bind(this)\n    this.handleItemSelectionChange = this.handleItemSelectionChange.bind(this)\n  }\n\n  /**\n   * Handler that gets called when an optical path should be removed.\n   */\n  handleItemRemoval (opticalPathIdentifier: string): void {\n    this.props.onOpticalPathActivityChange({\n      opticalPathIdentifier,\n      isActive: false\n    })\n  }\n\n  /**\n   * Handler that gets called when the selection of an optical path should change.\n   */\n  handleItemSelectionChange (\n    value: string\n  ): void {\n    this.setState({ selectedOpticalPathIdentifier: value })\n  }\n\n  /**\n   * Handler that gets called when an optical path should be added.\n   */\n  handleItemAddition (): void {\n    const identifier = this.state.selectedOpticalPathIdentifier\n    if (identifier !== undefined) {\n      this.props.onOpticalPathActivityChange({\n        opticalPathIdentifier: identifier,\n        isActive: true\n      })\n      this.setState({ selectedOpticalPathIdentifier: undefined })\n    }\n  }\n\n  render (): React.ReactNode {\n    if (this.props.metadata === undefined) {\n      return null\n    }\n\n    const isSelectable = this.props.opticalPaths.length > 1\n    const opticalPathItems: React.ReactNode[] = []\n    const optionItems: React.ReactNode[] = []\n    this.props.opticalPaths.forEach(opticalPath => {\n      const opticalPathIdentifier = opticalPath.identifier\n      const images = this.props.metadata[opticalPathIdentifier]\n      const seriesInstanceUID = images[0].SeriesInstanceUID\n      images[0].OpticalPathSequence.forEach(opticalPathItem => {\n        const id = opticalPathItem.OpticalPathIdentifier\n        const description = opticalPathItem.OpticalPathDescription\n        if (opticalPath.identifier === id) {\n          if (this.props.activeOpticalPathIdentifiers.has(id)) {\n            opticalPathItems.push(\n              <OpticalPathItem\n                key={`${seriesInstanceUID}-${id}`}\n                opticalPath={opticalPath}\n                metadata={images}\n                isVisible={this.props.visibleOpticalPathIdentifiers.has(id)}\n                defaultStyle={this.props.defaultOpticalPathStyles[id]}\n                onVisibilityChange={this.props.onOpticalPathVisibilityChange}\n                onStyleChange={this.props.onOpticalPathStyleChange}\n                onRemoval={this.handleItemRemoval}\n                isRemovable={isSelectable}\n              />\n            )\n          } else {\n            let title\n            if (description !== '') {\n              title = `${id} - ${description}`\n            } else {\n              title = `${id}`\n            }\n            optionItems.push(\n              <Option key={id} value={id}>{title}</Option>\n            )\n          }\n        }\n      })\n    })\n\n    let opticalPathSelector\n    if (isSelectable) {\n      opticalPathSelector = (\n        <Space align='center' size={20} style={{ padding: '14px' }}>\n          <Select\n            defaultValue=''\n            style={{ width: 200 }}\n            onChange={this.handleItemSelectionChange}\n            value={this.state.selectedOpticalPathIdentifier}\n            allowClear\n          >\n            {optionItems}\n          </Select>\n          <Tooltip title='Add'>\n            <Btn\n              icon={<AppstoreAddOutlined />}\n              type='primary'\n              onClick={this.handleItemAddition}\n            />\n          </Tooltip>\n        </Space>\n      )\n    }\n\n    return (\n      <Menu selectable={false}>\n        {opticalPathItems}\n        {opticalPathSelector}\n      </Menu>\n    )\n  }\n}\n\nexport default OpticalPathList\n","import React from 'react'\nimport * as dmv from 'dicom-microscopy-viewer'\nimport {\n  Button,\n  Col,\n  InputNumber,\n  Menu,\n  Popover,\n  Row,\n  Slider,\n  Space,\n  Switch\n} from 'antd'\nimport { SettingOutlined } from '@ant-design/icons'\nimport { FaEye, FaEyeSlash } from 'react-icons/fa'\n\nimport Description from './Description'\n\ninterface MappingItemProps {\n  mapping: dmv.mapping.ParameterMapping\n  metadata: dmv.metadata.ParametricMap[]\n  isVisible: boolean\n  defaultStyle: {\n    opacity: number\n  }\n  onVisibilityChange: ({ mappingUID, isVisible }: {\n    mappingUID: string\n    isVisible: boolean\n  }) => void\n  onStyleChange: ({ mappingUID, styleOptions }: {\n    mappingUID: string\n    styleOptions: {\n      opacity?: number\n    }\n  }) => void\n}\n\ninterface MappingItemState {\n  isVisible: boolean\n  currentStyle: {\n    opacity: number\n  }\n}\n\n/**\n * React component representing a Real World Value Mapping.\n */\nclass MappingItem extends React.Component<MappingItemProps, MappingItemState> {\n  constructor (props: MappingItemProps) {\n    super(props)\n    this.handleVisibilityChange = this.handleVisibilityChange.bind(this)\n    this.handleOpacityChange = this.handleOpacityChange.bind(this)\n    this.state = {\n      isVisible: this.props.isVisible,\n      currentStyle: {\n        opacity: this.props.defaultStyle.opacity\n      }\n    }\n  }\n\n  handleVisibilityChange (\n    checked: boolean,\n    event: React.MouseEvent<HTMLButtonElement>\n  ): void {\n    this.props.onVisibilityChange({\n      mappingUID: this.props.mapping.uid,\n      isVisible: checked\n    })\n    this.setState({ isVisible: checked })\n  }\n\n  handleOpacityChange (value: number | null): void {\n    if (value != null) {\n      this.props.onStyleChange({\n        mappingUID: this.props.mapping.uid,\n        styleOptions: {\n          opacity: value\n        }\n      })\n      this.setState(state => ({\n        currentStyle: {\n          opacity: value\n        }\n      }))\n    }\n  }\n\n  render (): React.ReactNode {\n    const attributes: Array<{ name: string, value: string }> = [\n      {\n        name: 'Description',\n        value: this.props.mapping.description\n      }\n    ]\n\n    const settings = (\n      <div>\n        <Row justify='center' align='middle'>\n          <Col span={6}>\n            Opacity\n          </Col>\n          <Col span={12}>\n            <Slider\n              range={false}\n              min={0}\n              max={1}\n              step={0.01}\n              value={this.state.currentStyle.opacity}\n              onChange={this.handleOpacityChange}\n            />\n          </Col>\n          <Col span={6}>\n            <InputNumber\n              min={0}\n              max={1}\n              size='small'\n              step={0.1}\n              style={{ width: '65px' }}\n              value={this.state.currentStyle.opacity}\n              onChange={this.handleOpacityChange}\n            />\n          </Col>\n        </Row>\n      </div>\n    )\n\n    /**\n     * This hack is required for Menu.Item to work properly:\n     * https://github.com/react-component/menu/issues/142\n     */\n    const {\n      defaultStyle,\n      isVisible,\n      mapping,\n      metadata,\n      onVisibilityChange,\n      onStyleChange,\n      ...otherProps\n    } = this.props\n    return (\n      <Menu.Item\n        style={{ height: '100%', paddingLeft: '3px' }}\n        key={this.props.mapping.uid}\n        {...otherProps}\n      >\n        <Space align='start'>\n          <div style={{ paddingLeft: '14px' }}>\n            <Space direction='vertical' align='end' size={100}>\n              <Space direction='vertical' align='end'>\n                <Switch\n                  size='small'\n                  onChange={this.handleVisibilityChange}\n                  checked={this.props.isVisible}\n                  checkedChildren={<FaEye />}\n                  unCheckedChildren={<FaEyeSlash />}\n                />\n                <Popover\n                  placement='left'\n                  content={settings}\n                  overlayStyle={{ width: '350px' }}\n                  title='Display Settings'\n                >\n                  <Button\n                    type='primary'\n                    shape='circle'\n                    icon={<SettingOutlined />}\n                  />\n                </Popover>\n              </Space>\n            </Space>\n          </div>\n          <Description\n            header={this.props.mapping.label}\n            attributes={attributes}\n            selectable\n            hasLongValues\n          />\n        </Space>\n      </Menu.Item>\n    )\n  }\n}\n\nexport default MappingItem\n","import React from 'react'\nimport * as dmv from 'dicom-microscopy-viewer'\nimport { Menu } from 'antd'\n\nimport MappingItem from './MappingItem'\n\ninterface MappingListProps {\n  mappings: dmv.mapping.ParameterMapping[]\n  metadata: {\n    [mappingUID: string]: dmv.metadata.ParametricMap[]\n  }\n  visibleMappingUIDs: Set<string>\n  defaultMappingStyles: {\n    [mappingUID: string]: { opacity: number }\n  }\n  onMappingVisibilityChange: ({ mappingUID, isVisible }: {\n    mappingUID: string\n    isVisible: boolean\n  }) => void\n  onMappingStyleChange: ({ mappingUID, styleOptions }: {\n    mappingUID: string\n    styleOptions: {\n      opacity?: number\n    }\n  }) => void\n}\n\n/**\n * React component representing a list of Real World Value Mappings.\n */\nclass MappingList extends React.Component<MappingListProps, {}> {\n  render (): React.ReactNode {\n    const items = this.props.mappings.map((mapping, index) => {\n      const uid = mapping.uid\n      return (\n        <MappingItem\n          key={mapping.uid}\n          mapping={mapping}\n          metadata={this.props.metadata[uid]}\n          isVisible={this.props.visibleMappingUIDs.has(uid)}\n          defaultStyle={this.props.defaultMappingStyles[uid]}\n          onVisibilityChange={this.props.onMappingVisibilityChange}\n          onStyleChange={this.props.onMappingStyleChange}\n        />\n      )\n    })\n\n    return (\n      <Menu selectable={false}>\n        {items}\n      </Menu>\n    )\n  }\n}\n\nexport default MappingList\n","import React from 'react'\nimport * as dmv from 'dicom-microscopy-viewer'\nimport {\n  Button,\n  Col,\n  InputNumber,\n  Menu,\n  Popover,\n  Row,\n  Slider,\n  Space,\n  Switch\n} from 'antd'\nimport { SettingOutlined } from '@ant-design/icons'\nimport { FaEye, FaEyeSlash } from 'react-icons/fa'\n\nimport Description from './Description'\n\ninterface SegmentItemProps {\n  segment: dmv.segment.Segment\n  isVisible: boolean\n  metadata: dmv.metadata.Segmentation[]\n  defaultStyle: {\n    opacity: number\n  }\n  onVisibilityChange: ({ segmentUID, isVisible }: {\n    segmentUID: string\n    isVisible: boolean\n  }) => void\n  onStyleChange: ({ segmentUID, styleOptions }: {\n    segmentUID: string\n    styleOptions: {\n      opacity: number\n    }\n  }) => void\n}\n\ninterface SegmentItemState {\n  isVisible: boolean\n  currentStyle: {\n    opacity: number\n  }\n}\n\n/**\n * React component representing a Segment.\n */\nclass SegmentItem extends React.Component<SegmentItemProps, SegmentItemState> {\n  constructor (props: SegmentItemProps) {\n    super(props)\n    this.handleVisibilityChange = this.handleVisibilityChange.bind(this)\n    this.handleOpacityChange = this.handleOpacityChange.bind(this)\n    this.state = {\n      isVisible: this.props.isVisible,\n      currentStyle: { opacity: this.props.defaultStyle.opacity }\n    }\n  }\n\n  handleVisibilityChange (\n    checked: boolean,\n    event: React.MouseEvent<HTMLButtonElement>\n  ): void {\n    this.props.onVisibilityChange({\n      segmentUID: this.props.segment.uid,\n      isVisible: checked\n    })\n    this.setState({ isVisible: checked })\n  }\n\n  handleOpacityChange (value: number | null): void {\n    if (value != null) {\n      this.props.onStyleChange({\n        segmentUID: this.props.segment.uid,\n        styleOptions: {\n          opacity: value\n        }\n      })\n      this.setState({ currentStyle: { opacity: value } })\n    }\n  }\n\n  render (): React.ReactNode {\n    const attributes: Array<{ name: string, value: string }> = [\n      {\n        name: 'Property Type',\n        value: this.props.segment.propertyType.CodeMeaning\n      },\n      {\n        name: 'Property Category',\n        value: this.props.segment.propertyCategory.CodeMeaning\n      },\n      {\n        name: 'Algorithm Name',\n        value: this.props.segment.algorithmName\n      }\n    ]\n\n    const settings = (\n      <div>\n        <Row justify='center' align='middle'>\n          <Col span={6}>\n            Opacity\n          </Col>\n          <Col span={12}>\n            <Slider\n              range={false}\n              min={0}\n              max={1}\n              step={0.01}\n              value={this.state.currentStyle.opacity}\n              onChange={this.handleOpacityChange}\n            />\n          </Col>\n          <Col span={6}>\n            <InputNumber\n              min={0}\n              max={1}\n              size='small'\n              step={0.1}\n              style={{ width: '65px' }}\n              value={this.state.currentStyle.opacity}\n              onChange={this.handleOpacityChange}\n            />\n          </Col>\n        </Row>\n      </div>\n    )\n\n    /**\n     * This hack is required for Menu.Item to work properly:\n     * https://github.com/react-component/menu/issues/142\n     */\n    const {\n      defaultStyle,\n      isVisible,\n      segment,\n      metadata,\n      onVisibilityChange,\n      onStyleChange,\n      ...otherProps\n    } = this.props\n    return (\n      <Menu.Item\n        style={{ height: '100%', paddingLeft: '3px' }}\n        key={this.props.segment.uid}\n        {...otherProps}\n      >\n        <Space align='start'>\n          <div style={{ paddingLeft: '14px' }}>\n            <Space direction='vertical' align='end'>\n              <Switch\n                size='small'\n                onChange={this.handleVisibilityChange}\n                checked={this.props.isVisible}\n                checkedChildren={<FaEye />}\n                unCheckedChildren={<FaEyeSlash />}\n              />\n              <Popover\n                placement='left'\n                content={settings}\n                overlayStyle={{ width: '350px' }}\n                title='Display Settings'\n              >\n                <Button\n                  type='primary'\n                  shape='circle'\n                  icon={<SettingOutlined />}\n                />\n              </Popover>\n            </Space>\n          </div>\n          <Description\n            header={this.props.segment.label}\n            attributes={attributes}\n            selectable\n            hasLongValues\n          />\n        </Space>\n      </Menu.Item>\n    )\n  }\n}\n\nexport default SegmentItem\n","import React from 'react'\nimport * as dmv from 'dicom-microscopy-viewer'\nimport { Menu } from 'antd'\n\nimport SegmentItem from './SegmentItem'\n\ninterface SegmentListProps {\n  segments: dmv.segment.Segment[]\n  visibleSegmentUIDs: Set<string>\n  metadata: {\n    [segmentUID: string]: dmv.metadata.Segmentation[]\n  }\n  defaultSegmentStyles: {\n    [segmentUID: string]: {\n      opacity: number\n    }\n  }\n  onSegmentVisibilityChange: ({ segmentUID, isVisible }: {\n    segmentUID: string\n    isVisible: boolean\n  }) => void\n  onSegmentStyleChange: ({ segmentUID, styleOptions }: {\n    segmentUID: string\n    styleOptions: {\n      opacity: number\n    }\n  }) => void\n}\n\n/**\n * React component representing a list of Segments.\n */\nclass SegmentList extends React.Component<SegmentListProps, {}> {\n  render (): React.ReactNode {\n    const items = this.props.segments.map((segment, index) => {\n      const uid = segment.uid\n      return (\n        <SegmentItem\n          key={segment.uid}\n          segment={segment}\n          metadata={this.props.metadata[uid]}\n          isVisible={this.props.visibleSegmentUIDs.has(uid)}\n          defaultStyle={this.props.defaultSegmentStyles[uid]}\n          onVisibilityChange={this.props.onSegmentVisibilityChange}\n          onStyleChange={this.props.onSegmentStyleChange}\n        />\n      )\n    })\n\n    return (\n      <Menu selectable={false}>\n        {items}\n      </Menu>\n    )\n  }\n}\n\nexport default SegmentList\n","import React from 'react'\nimport {\n  NavigateFunction,\n  Params,\n  useLocation,\n  useNavigate,\n  useParams,\n  Location\n} from 'react-router-dom'\n\nexport interface RouteComponentProps {\n  location: Location\n  navigate: NavigateFunction\n  params: Params<string>\n}\n\nexport function withRouter<T> (Component: React.ComponentType<T>): Function {\n  function ComponentWithRouterProp (props: any): JSX.Element {\n    const location = useLocation()\n    const navigate = useNavigate()\n    const params = useParams()\n    return (\n      <Component\n        {...props}\n        location={location}\n        navigate={navigate}\n        params={params}\n      />\n    )\n  }\n  return ComponentWithRouterProp\n}\n","import React from 'react'\nimport { Col, Divider, InputNumber, Row, Slider } from 'antd'\n\ninterface ColorSettingsMenuProps {\n  annotationGroupsUIDs: string[]\n  defaultStyle: {\n    opacity: number\n    color: number[]\n  }\n  onStyleChange: Function\n}\n\ninterface ColorSettingsMenuState {\n  currentStyle: {\n    opacity: number\n    color?: number[]\n  }\n}\n\n/**\n * React component representing an Annotation Group.\n */\nclass ColorSettingsMenu extends React.Component<\nColorSettingsMenuProps,\nColorSettingsMenuState\n> {\n  constructor (props: ColorSettingsMenuProps) {\n    super(props)\n    this.handleOpacityChange = this.handleOpacityChange.bind(this)\n    this.handleColorRChange = this.handleColorRChange.bind(this)\n    this.handleColorGChange = this.handleColorGChange.bind(this)\n    this.handleColorBChange = this.handleColorBChange.bind(this)\n    this.getCurrentColor = this.getCurrentColor.bind(this)\n    this.state = {\n      currentStyle: {\n        opacity: this.props.defaultStyle.opacity,\n        color: this.props.defaultStyle.color\n      }\n    }\n  }\n\n  handleOpacityChange (value: number | null): void {\n    if (value != null) {\n      this.props.annotationGroupsUIDs.forEach((uid) => {\n        this.props.onStyleChange({\n          uid,\n          styleOptions: {\n            color: this.state.currentStyle.color,\n            opacity: value\n          }\n        })\n      })\n      this.setState({\n        currentStyle: {\n          opacity: value,\n          color: this.state.currentStyle.color\n        }\n      })\n    }\n  }\n\n  handleColorRChange (value: number | number[] | null): void {\n    if (value != null && this.state.currentStyle.color !== undefined) {\n      const color = [\n        Array.isArray(value) ? value[0] : value,\n        this.state.currentStyle.color[1],\n        this.state.currentStyle.color[2]\n      ]\n      this.setState((state) => ({\n        currentStyle: {\n          color: color,\n          opacity: state.currentStyle.opacity\n        }\n      }))\n      this.props.annotationGroupsUIDs.forEach((uid) => {\n        this.props.onStyleChange({\n          uid,\n          styleOptions: {\n            color: color,\n            opacity: this.state.currentStyle.opacity\n          }\n        })\n      })\n    }\n  }\n\n  handleColorGChange (value: number | number[] | null): void {\n    if (value != null && this.state.currentStyle.color !== undefined) {\n      const color = [\n        this.state.currentStyle.color[0],\n        Array.isArray(value) ? value[0] : value,\n        this.state.currentStyle.color[2]\n      ]\n      this.setState((state) => ({\n        currentStyle: {\n          color: color,\n          opacity: state.currentStyle.opacity\n        }\n      }))\n      this.props.annotationGroupsUIDs.forEach((uid) => {\n        this.props.onStyleChange({\n          uid,\n          styleOptions: {\n            color: color,\n            opacity: this.state.currentStyle.opacity\n          }\n        })\n      })\n    }\n  }\n\n  handleColorBChange (value: number | number[] | null): void {\n    if (value != null && this.state.currentStyle.color !== undefined) {\n      const color = [\n        this.state.currentStyle.color[0],\n        this.state.currentStyle.color[1],\n        Array.isArray(value) ? value[0] : value\n      ]\n      this.setState((state) => ({\n        currentStyle: {\n          color: color,\n          opacity: state.currentStyle.opacity\n        }\n      }))\n\n      this.props.annotationGroupsUIDs.forEach((uid) => {\n        this.props.onStyleChange({\n          uid,\n          styleOptions: {\n            color: color,\n            opacity: this.state.currentStyle.opacity\n          }\n        })\n      })\n    }\n  }\n\n  getCurrentColor (): string {\n    const rgb2hex = (values: number[]): string => {\n      const r = values[0]\n      const g = values[1]\n      const b = values[2]\n      return '#' + (0x1000000 + (r << 16) + (g << 8) + b).toString(16).slice(1)\n    }\n\n    if (this.state.currentStyle.color != null) {\n      return rgb2hex(this.state.currentStyle.color)\n    } else {\n      return 'white'\n    }\n  }\n\n  render (): React.ReactNode {\n    let colorSettings\n    if (this.state.currentStyle.color != null) {\n      colorSettings = (\n        <>\n          <Divider plain>Color</Divider>\n          <Row justify='center' align='middle' gutter={[8, 8]}>\n            <Col span={5}>Red</Col>\n            <Col span={14}>\n              <Slider\n                range={false}\n                min={0}\n                max={255}\n                step={1}\n                value={this.state.currentStyle.color[0]}\n                onChange={this.handleColorRChange}\n              />\n            </Col>\n            <Col span={5}>\n              <InputNumber\n                min={0}\n                max={255}\n                size='small'\n                style={{ width: '65px' }}\n                value={this.state.currentStyle.color[0]}\n                onChange={this.handleColorRChange}\n              />\n            </Col>\n          </Row>\n\n          <Row justify='center' align='middle' gutter={[8, 8]}>\n            <Col span={5}>Green</Col>\n            <Col span={14}>\n              <Slider\n                range={false}\n                min={0}\n                max={255}\n                step={1}\n                value={this.state.currentStyle.color[1]}\n                onChange={this.handleColorGChange}\n              />\n            </Col>\n            <Col span={5}>\n              <InputNumber\n                min={0}\n                max={255}\n                size='small'\n                style={{ width: '65px' }}\n                value={this.state.currentStyle.color[1]}\n                onChange={this.handleColorGChange}\n              />\n            </Col>\n          </Row>\n\n          <Row justify='center' align='middle' gutter={[8, 8]}>\n            <Col span={5}>Blue</Col>\n            <Col span={14}>\n              <Slider\n                range={false}\n                min={0}\n                max={255}\n                step={1}\n                value={this.state.currentStyle.color[2]}\n                onChange={this.handleColorBChange}\n              />\n            </Col>\n            <Col span={5}>\n              <InputNumber\n                min={0}\n                max={255}\n                size='small'\n                style={{ width: '65px' }}\n                value={this.state.currentStyle.color[2]}\n                onChange={this.handleColorBChange}\n              />\n            </Col>\n          </Row>\n          <Divider plain />\n        </>\n      )\n    }\n\n    return (\n      <div>\n        {colorSettings}\n        <Row justify='start' align='middle' gutter={[8, 8]}>\n          <Col span={6}>Opacity</Col>\n          <Col span={12}>\n            <Slider\n              range={false}\n              min={0}\n              max={1}\n              step={0.01}\n              value={this.state.currentStyle.opacity}\n              onChange={this.handleOpacityChange}\n            />\n          </Col>\n          <Col span={6}>\n            <InputNumber\n              min={0}\n              max={1}\n              size='small'\n              step={0.1}\n              style={{ width: '65px' }}\n              value={this.state.currentStyle.opacity}\n              onChange={this.handleOpacityChange}\n            />\n          </Col>\n        </Row>\n      </div>\n    )\n  }\n}\n\nexport default ColorSettingsMenu\n","import React from 'react'\nimport { Menu, Space, Checkbox, Tooltip, Popover, Button } from 'antd'\nimport { SettingOutlined } from '@ant-design/icons'\nimport { Category, Type } from './AnnotationCategoryList'\nimport ColorSettingsMenu from './ColorSettingsMenu'\n\nconst AnnotationCategoryItem = ({\n  category,\n  onChange,\n  checkedAnnotationUids,\n  onStyleChange,\n  defaultAnnotationStyles\n}: {\n  category: Category\n  onChange: Function\n  onStyleChange: Function\n  defaultAnnotationStyles: {\n    [annotationUID: string]: {\n      opacity: number\n      color: number[]\n    }\n  }\n  checkedAnnotationUids: Set<string>\n}): JSX.Element => {\n  const { types } = category\n\n  const onCheckCategoryChange = (e: any): void => {\n    const isVisible = e.target.checked\n    types.forEach((type: Type) => {\n      handleChangeCheckedType({ type, isVisible })\n    })\n  }\n\n  const checkAll = types.every((type: Type) =>\n    type.uids.every((uid: string) => checkedAnnotationUids.has(uid))\n  )\n  const indeterminate =\n    !checkAll &&\n    types.some((type: Type) =>\n      type.uids.some((uid: string) => checkedAnnotationUids.has(uid))\n    )\n\n  const handleChangeCheckedType = ({\n    type,\n    isVisible\n  }: {\n    type: Type\n    isVisible: boolean\n  }): void => {\n    type.uids.forEach((uid: string) => {\n      onChange({ roiUID: uid, isVisible })\n    })\n  }\n\n  return (\n    <Menu.Item\n      style={{ height: '100%', paddingLeft: '3px' }}\n      key={category.CodeMeaning}\n    >\n      <Space align='start'>\n        <div style={{ paddingLeft: '14px', color: 'black' }}>\n          <Space direction='vertical' align='end'>\n            <Checkbox\n              indeterminate={indeterminate}\n              checked={checkAll}\n              onChange={onCheckCategoryChange}\n            >\n              <Tooltip\n                title={`${category.CodeValue}:${category.CodingSchemeDesignator}`}\n                mouseEnterDelay={1}\n              >\n                {category.CodeMeaning}\n              </Tooltip>\n              <Popover\n                placement='topLeft'\n                overlayStyle={{ width: '350px' }}\n                title='Display Settings'\n                content={() => (\n                  <ColorSettingsMenu\n                    annotationGroupsUIDs={types.reduce(\n                      (acc: string[], type) => {\n                        return [...acc, ...type.uids]\n                      },\n                      []\n                    )}\n                    onStyleChange={onStyleChange}\n                    defaultStyle={\n                      defaultAnnotationStyles[types[0].uids[0]]\n                    }\n                  />\n                )}\n              >\n                <Button\n                  type='primary'\n                  shape='circle'\n                  style={{ marginLeft: '10px' }}\n                  icon={<SettingOutlined />}\n                />\n              </Popover>\n            </Checkbox>\n          </Space>\n          {types.map((type: Type) => {\n            const { CodeMeaning, CodingSchemeDesignator, CodeValue, uids } =\n              type\n            const shortenedCodeMeaning = CodeMeaning.slice(0, 22)\n            const displayCodeMeaning = shortenedCodeMeaning === CodeMeaning ? CodeMeaning : `${shortenedCodeMeaning}...`\n            const isChecked = uids.every((uid: string) =>\n              checkedAnnotationUids.has(uid)\n            )\n            const indeterminateType =\n              !isChecked &&\n              uids.some((uid: string) => checkedAnnotationUids.has(uid))\n            return (\n              <div\n                key={`${type.CodingSchemeDesignator}:${type.CodeMeaning}`}\n                style={{\n                  paddingLeft: '25px',\n                  width: '100%',\n                  display: 'flex',\n                  flexDirection: 'row'\n                }}\n              >\n                <Checkbox\n                  indeterminate={indeterminateType}\n                  checked={isChecked}\n                  onChange={(e: any) =>\n                    handleChangeCheckedType({\n                      type,\n                      isVisible: e.target.checked\n                    })}\n                />\n                <div style={{ paddingLeft: '5px' }}>\n                  <Tooltip\n                    title={`${CodeValue}:${CodingSchemeDesignator}`}\n                    mouseEnterDelay={1}\n                  >\n                    {displayCodeMeaning}\n                  </Tooltip>\n                  <Popover\n                    placement='topLeft'\n                    overlayStyle={{ width: '350px' }}\n                    title='Display Settings'\n                    content={() => (\n                      <ColorSettingsMenu\n                        annotationGroupsUIDs={type.uids}\n                        onStyleChange={onStyleChange}\n                        defaultStyle={defaultAnnotationStyles[type.uids[0]]}\n                      />\n                    )}\n                  >\n                    <Button\n                      type='primary'\n                      shape='circle'\n                      style={{ marginLeft: '10px' }}\n                      icon={<SettingOutlined />}\n                    />\n                  </Popover>\n                </div>\n              </div>\n            )\n          })}\n        </div>\n      </Space>\n    </Menu.Item>\n  )\n}\n\nexport default AnnotationCategoryItem\n","import React from 'react'\nimport { Menu } from 'antd'\nimport AnnotationCategoryItem from './AnnotationCategoryItem'\n\nexport interface AnnotationCategoryAndType {\n  uid: string\n  type: Omit<Type, 'uids'>\n  category: Omit<Category, 'types'>\n}\nexport interface Type {\n  CodeValue: string\n  CodeMeaning: string\n  CodingSchemeDesignator: string\n  uids: string[]\n}\nexport interface Category {\n  CodeValue: string\n  CodeMeaning: string\n  CodingSchemeDesignator: string\n  types: Type[]\n}\n\nconst getCategories = (annotations: any): Record<string, Category> => {\n  const categories = annotations?.reduce(\n    (\n      categoriesAcc: Record<string, Category & { types: Record<string, Type> }>,\n      annotation: AnnotationCategoryAndType\n    ) => {\n      const { category, type, uid } = annotation\n      const categoryKey = category.CodeMeaning\n      const typeKey = type.CodeMeaning\n\n      const oldCategory = categoriesAcc[categoryKey] ?? {\n        ...category,\n        types: {}\n      }\n      const oldType = oldCategory.types[typeKey] ?? {\n        ...type,\n        uids: []\n      }\n\n      return {\n        ...categoriesAcc,\n        [categoryKey]: {\n          ...oldCategory,\n          types: {\n            ...oldCategory.types,\n            [typeKey]: { ...oldType, uids: [...oldType.uids, uid] }\n          }\n        }\n      }\n    },\n    {}\n  )\n\n  // Normalizing types so that it's an array instead of an object:\n  Object.keys(categories).forEach((categoryKey: string) => {\n    const category = categories[categoryKey]\n    const { types } = category\n    const typesArr = Object.keys(types).map(\n      (typeKey: string) => types[typeKey]\n    )\n    categories[categoryKey].types = typesArr\n  })\n\n  return categories\n}\n\nconst AnnotationCategoryList = ({\n  annotations,\n  onChange,\n  onStyleChange,\n  defaultAnnotationStyles,\n  checkedAnnotationUids\n}: {\n  annotations: AnnotationCategoryAndType[]\n  onChange: Function\n  onStyleChange: Function\n  defaultAnnotationStyles: {\n    [annotationUID: string]: {\n      opacity: number\n      color: number[]\n    }\n  }\n  checkedAnnotationUids: Set<string>\n}): JSX.Element => {\n  const categories: Record<string, Category> = getCategories(annotations)\n\n  if (Object.keys(categories).length === 0) {\n    return <></>\n  }\n\n  const items = Object.keys(categories).map((categoryKey: any) => {\n    const category = categories[categoryKey]\n    return (\n      <AnnotationCategoryItem\n        key={category.CodeMeaning}\n        category={category}\n        onChange={onChange}\n        onStyleChange={onStyleChange}\n        defaultAnnotationStyles={defaultAnnotationStyles}\n        checkedAnnotationUids={checkedAnnotationUids}\n      />\n    )\n  })\n\n  return <Menu selectable={false}>{items}</Menu>\n}\nexport default AnnotationCategoryList\n","const HoveredRoiTooltip = ({\n  xPosition,\n  yPosition,\n  attributes\n}: {\n  xPosition: number\n  yPosition: number\n  attributes: Array<{ name: string, value: string }>\n}): JSX.Element => {\n  return (\n    <div\n      style={{\n        position: 'fixed',\n        top: `${yPosition}px`,\n        left: `${xPosition}px`,\n        backgroundColor: 'rgba(230, 230, 230, 0.65)',\n        minWidth: '150px',\n        minHeight: '60px',\n        padding: '20px',\n        fontWeight: 'bold',\n        pointerEvents: 'none'\n      }}\n    >\n      {attributes.map((attr) => (\n        <div key={attr.name}>\n          {attr.name}: <span style={{ fontWeight: 500 }}>{attr.value}</span>\n        </div>\n      ))}\n    </div>\n  )\n}\n\nexport default HoveredRoiTooltip\n","import * as dmv from 'dicom-microscopy-viewer'\nimport * as dcmjs from 'dcmjs'\nimport { AnnotationCategoryAndType } from '../components/AnnotationCategoryList'\n\nexport const adaptRoiToAnnotation = (roi: dmv.roi.ROI): AnnotationCategoryAndType => {\n  const { uid, evaluations } = roi\n\n  const result = {\n    category: {\n      CodeValue: 'undefined',\n      CodeMeaning: 'undefined',\n      CodingSchemeDesignator: 'undefined'\n    },\n    type: {\n      CodeValue: 'undefined',\n      CodeMeaning: 'undefined',\n      CodingSchemeDesignator: 'undefined'\n    }\n  }\n\n  evaluations.forEach((\n    item: (\n      dcmjs.sr.valueTypes.TextContentItem |\n      dcmjs.sr.valueTypes.CodeContentItem\n    )\n  ) => {\n    const nameValue = item.ConceptNameCodeSequence[0].CodeValue\n    if (item.ValueType === dcmjs.sr.valueTypes.ValueTypes.CODE) {\n      const codeContentItem = item as dcmjs.sr.valueTypes.CodeContentItem\n      const value = codeContentItem.ConceptCodeSequence[0]\n      // For consistency with Segment and Annotation Group\n      if (nameValue === '276214006') {\n        result.category = { ...value }\n      } else if (nameValue === '121071') {\n        result.type = { ...value }\n      }\n    }\n  })\n\n  return {\n    ...result,\n    uid\n  }\n}\n","import React from 'react'\nimport {\n  FaCrosshairs,\n  FaDrawPolygon,\n  FaEye,\n  FaEyeSlash,\n  FaHandPaper,\n  FaHandPointer,\n  FaTrash,\n  FaSave\n} from 'react-icons/fa'\nimport {\n  Button as Btn,\n  Checkbox,\n  Descriptions,\n  Divider,\n  InputNumber,\n  message,\n  Menu,\n  Modal,\n  Layout,\n  Row,\n  Select,\n  Space,\n  Tooltip\n} from 'antd'\nimport { UndoOutlined, CheckOutlined, StopOutlined } from '@ant-design/icons'\nimport * as dmv from 'dicom-microscopy-viewer'\nimport * as dcmjs from 'dcmjs'\nimport * as dwc from 'dicomweb-client'\n\nimport DicomWebManager from '../DicomWebManager'\nimport AnnotationList from './AnnotationList'\nimport AnnotationGroupList from './AnnotationGroupList'\nimport Button from './Button'\nimport Equipment from './Equipment'\nimport Report, { MeasurementReport } from './Report'\nimport SpecimenList from './SpecimenList'\nimport OpticalPathList from './OpticalPathList'\nimport MappingList from './MappingList'\nimport SegmentList from './SegmentList'\nimport { AnnotationSettings } from '../AppConfig'\nimport { Slide } from '../data/slides'\nimport { StorageClasses } from '../data/uids'\nimport { findContentItemsByName } from '../utils/sr'\nimport { RouteComponentProps, withRouter } from '../utils/router'\nimport { CustomError, errorTypes } from '../utils/CustomError'\nimport NotificationMiddleware, {\n  NotificationMiddlewareContext\n} from '../services/NotificationMiddleware'\nimport AnnotationCategoryList from './AnnotationCategoryList'\nimport HoveredRoiTooltip from './HoveredRoiTooltip'\nimport { adaptRoiToAnnotation } from '../services/RoiToAnnotationAdapter'\n\nconst DEFAULT_ROI_STROKE_COLOR: number[] = [255, 234, 0] // [0, 126, 163]\nconst DEFAULT_ROI_FILL_COLOR: number[] = [255, 234, 0, 0.2] // [0, 126, 163, 0.2]\nconst DEFAULT_ROI_STROKE_WIDTH: number = 2\nconst DEFAULT_ROI_RADIUS: number = 5\n\nconst DEFAULT_ANNOTATION_OPACITY = 0.4\nconst DEFAULT_ANNOTATION_STROKE_COLOR = [0, 0, 0]\nconst DEFAULT_ANNOTATION_COLOR_PALETTE = [\n  [54, 162, 235],\n  [181, 65, 98],\n  [75, 192, 192],\n  [255, 158, 64],\n  [153, 102, 254],\n  [255, 205, 86],\n  [200, 203, 207]\n]\n\nconst _buildKey = (concept: {\n  CodeValue: string\n  CodeMeaning: string\n  CodingSchemeDesignator: string\n  CodingSchemeVersion?: string\n}): string => {\n  const codingScheme = concept.CodingSchemeDesignator\n  const codeValue = concept.CodeValue\n  return `${codingScheme}-${codeValue}`\n}\n\nconst _getRoiKey = (roi: dmv.roi.ROI): string | undefined => {\n  const matches = findContentItemsByName({\n    content: roi.evaluations,\n    name: new dcmjs.sr.coding.CodedConcept({\n      value: '121071',\n      meaning: 'Finding',\n      schemeDesignator: 'DCM'\n    })\n  })\n  if (matches.length === 0) {\n    console.warn(`no finding found for ROI ${roi.uid}`)\n    return\n  }\n  const finding = matches[0] as dcmjs.sr.valueTypes.CodeContentItem\n  const findingName = finding.ConceptCodeSequence[0]\n  return _buildKey(findingName)\n}\n\nconst _areROIsEqual = (a: dmv.roi.ROI, b: dmv.roi.ROI): boolean => {\n  if (a.scoord3d.graphicType !== b.scoord3d.graphicType) {\n    return false\n  }\n  if (a.scoord3d.frameOfReferenceUID !== b.scoord3d.frameOfReferenceUID) {\n    return false\n  }\n  if (a.scoord3d.graphicData.length !== b.scoord3d.graphicData.length) {\n    return false\n  }\n\n  const decimals = 6\n  for (let i = 0; i < a.scoord3d.graphicData.length; ++i) {\n    if (a.scoord3d.graphicType === 'POINT') {\n      const s1 = a.scoord3d as dmv.scoord3d.Point\n      const s2 = b.scoord3d as dmv.scoord3d.Point\n      const c1 = s1.graphicData[i].toPrecision(decimals)\n      const c2 = s2.graphicData[i].toPrecision(decimals)\n      if (c1 !== c2) {\n        return false\n      }\n    } else {\n      const s1 = a.scoord3d as dmv.scoord3d.Polygon\n      const s2 = b.scoord3d as dmv.scoord3d.Polygon\n      for (let j = 0; j < s1.graphicData[i].length; ++j) {\n        const c1 = s1.graphicData[i][j].toPrecision(decimals)\n        const c2 = s2.graphicData[i][j].toPrecision(decimals)\n        if (c1 !== c2) {\n          return false\n        }\n      }\n    }\n  }\n  return true\n}\n\nconst _formatRoiStyle = (style: {\n  stroke?: {\n    color?: number[]\n    width?: number\n  }\n  fill?: {\n    color?: number[]\n  }\n  radius?: number\n}): dmv.viewer.ROIStyleOptions => {\n  const stroke = {\n    color: DEFAULT_ROI_STROKE_COLOR,\n    width: DEFAULT_ROI_STROKE_WIDTH\n  }\n  if (style.stroke != null) {\n    if (style.stroke.color != null) {\n      stroke.color = style.stroke.color\n    }\n    if (style.stroke.width != null) {\n      stroke.width = style.stroke.width\n    }\n  }\n  const fill = {\n    color: DEFAULT_ROI_FILL_COLOR\n  }\n  if (style.fill != null) {\n    if (style.fill.color != null) {\n      fill.color = style.fill.color\n    }\n  }\n  return {\n    stroke,\n    fill,\n    image: {\n      circle: {\n        radius: style.radius != null\n          ? style.radius\n          : Math.max(5 - stroke.width, 1),\n        stroke,\n        fill\n      }\n    }\n  }\n}\n\nconst _constructViewers = ({ clients, slide, preload }: {\n  clients: { [key: string]: dwc.api.DICOMwebClient }\n  slide: Slide\n  preload?: boolean\n}): {\n  volumeViewer: dmv.viewer.VolumeImageViewer\n  labelViewer?: dmv.viewer.LabelImageViewer\n} => {\n  console.info(\n    'instantiate viewer for VOLUME images of slide ' +\n    `\"${slide.volumeImages[0].ContainerIdentifier}\"`\n  )\n  try {\n    const volumeViewer = new dmv.viewer.VolumeImageViewer({\n      clientMapping: clients,\n      metadata: slide.volumeImages,\n      controls: ['overview', 'position'],\n      preload: preload,\n      errorInterceptor: (error: CustomError) => {\n        NotificationMiddleware.onError(\n          NotificationMiddlewareContext.DMV, error\n        )\n      }\n    })\n    volumeViewer.activateSelectInteraction({})\n\n    let labelViewer\n    if (slide.labelImages.length > 0) {\n      console.info(\n        'instantiate viewer for LABEL image of slide ' +\n        `\"${slide.labelImages[0].ContainerIdentifier}\"`\n      )\n      labelViewer = new dmv.viewer.LabelImageViewer({\n        client: clients[StorageClasses.VL_WHOLE_SLIDE_MICROSCOPY_IMAGE],\n        metadata: slide.labelImages[0],\n        resizeFactor: 1,\n        orientation: 'vertical',\n        errorInterceptor: (error: CustomError) => {\n          NotificationMiddleware.onError(\n            NotificationMiddlewareContext.DMV,\n            error\n          )\n        }\n      })\n    }\n\n    return { volumeViewer, labelViewer }\n  } catch (error) {\n    // eslint-disable-next-line @typescript-eslint/no-floating-promises\n    NotificationMiddleware.onError(\n      NotificationMiddlewareContext.SLIM,\n      new CustomError(\n        errorTypes.VISUALIZATION,\n        'Failed to instantiate viewer'\n      )\n    )\n    throw error\n  }\n}\n\n/*\n * Check whether the report is structured according to template\n * TID 1500 \"MeasurementReport\".\n */\nconst _implementsTID1500 = (\n  report: dmv.metadata.Comprehensive3DSR\n): boolean => {\n  const templateSeq = report.ContentTemplateSequence\n  if (templateSeq.length > 0) {\n    const tid = templateSeq[0].TemplateIdentifier\n    if (tid === '1500') {\n      return true\n    }\n  }\n  return false\n}\n\n/*\n * Check whether the subject described in the report is a specimen as compared\n * to a patient, fetus, or device.\n */\nconst _describesSpecimenSubject = (\n  report: dmv.metadata.Comprehensive3DSR\n): boolean => {\n  const items = findContentItemsByName({\n    content: report.ContentSequence,\n    name: new dcmjs.sr.coding.CodedConcept({\n      value: '121024',\n      schemeDesignator: 'DCM',\n      meaning: 'Subject Class'\n    })\n  })\n  if (items.length === 0) {\n    return false\n  }\n  const subjectClassItem = items[0] as dcmjs.sr.valueTypes.CodeContentItem\n  const subjectClassValue = subjectClassItem.ConceptCodeSequence[0]\n  const retrievedConcept = new dcmjs.sr.coding.CodedConcept({\n    value: subjectClassValue.CodeValue,\n    meaning: subjectClassValue.CodeMeaning,\n    schemeDesignator: subjectClassValue.CodingSchemeDesignator\n  })\n  const expectedConcept = new dcmjs.sr.coding.CodedConcept({\n    value: '121027',\n    meaning: 'Specimen',\n    schemeDesignator: 'DCM'\n  })\n  if (retrievedConcept.equals(expectedConcept)) {\n    return true\n  }\n  return false\n}\n\n/*\n * Check whether the report contains appropriate graphic ROI annotations.\n */\nconst _containsROIAnnotations = (\n  report: dmv.metadata.Comprehensive3DSR\n): boolean => {\n  const measurements = findContentItemsByName({\n    content: report.ContentSequence,\n    name: new dcmjs.sr.coding.CodedConcept({\n      value: '126010',\n      schemeDesignator: 'DCM',\n      meaning: 'Imaging Measurements'\n    })\n  })\n  if (measurements.length === 0) {\n    return false\n  }\n  const container = measurements[0] as dcmjs.sr.valueTypes.ContainerContentItem\n  const measurementGroups = findContentItemsByName({\n    content: container.ContentSequence,\n    name: new dcmjs.sr.coding.CodedConcept({\n      value: '125007',\n      schemeDesignator: 'DCM',\n      meaning: 'Measurement Group'\n    })\n  })\n\n  let foundRegion = false\n  measurementGroups.forEach((group) => {\n    const container = group as dcmjs.sr.valueTypes.ContainerContentItem\n    const regions = findContentItemsByName({\n      content: container.ContentSequence,\n      name: new dcmjs.sr.coding.CodedConcept({\n        value: '111030',\n        schemeDesignator: 'DCM',\n        meaning: 'Image Region'\n      })\n    })\n    if (regions.length > 0) {\n      if (regions[0].ValueType === dcmjs.sr.valueTypes.ValueTypes.SCOORD3D) {\n        foundRegion = true\n      }\n    }\n  })\n\n  return foundRegion\n}\n\ninterface EvaluationOptions {\n  name: dcmjs.sr.coding.CodedConcept\n  values: dcmjs.sr.coding.CodedConcept[]\n}\n\ninterface Evaluation {\n  name: dcmjs.sr.coding.CodedConcept\n  value: dcmjs.sr.coding.CodedConcept\n}\n\ninterface Measurement {\n  name: dcmjs.sr.coding.CodedConcept\n  value?: number\n  unit: dcmjs.sr.coding.CodedConcept\n}\n\ninterface SlideViewerProps extends RouteComponentProps {\n  slide: Slide\n  clients: { [key: string]: DicomWebManager }\n  studyInstanceUID: string\n  seriesInstanceUID: string\n  app: {\n    name: string\n    version: string\n    uid: string\n    organization?: string\n  }\n  preload?: boolean\n  annotations: AnnotationSettings[]\n  enableAnnotationTools: boolean\n  user?: {\n    name: string\n    email: string\n  }\n  selectedPresentationStateUID?: string\n}\n\ninterface SlideViewerState {\n  visibleRoiUIDs: Set<string>\n  visibleSegmentUIDs: Set<string>\n  visibleMappingUIDs: Set<string>\n  visibleAnnotationGroupUIDs: Set<string>\n  visibleOpticalPathIdentifiers: Set<string>\n  activeOpticalPathIdentifiers: Set<string>\n  presentationStates: dmv.metadata.AdvancedBlendingPresentationState[]\n  selectedPresentationStateUID?: string\n  selectedFinding?: dcmjs.sr.coding.CodedConcept\n  selectedEvaluations: Evaluation[]\n  selectedGeometryType?: string\n  selectedMarkup?: string\n  selectedRoi?: dmv.roi.ROI\n  selectedRoiUIDs: Set<string>\n  generatedReport?: dmv.metadata.Comprehensive3DSR\n  isLoading: boolean\n  isAnnotationModalVisible: boolean\n  isSelectedRoiModalVisible: boolean\n  isHoveredRoiTooltipVisible: boolean\n  hoveredRoi?: dmv.roi.ROI\n  hoveredRoiAttributes: Array<{ name: string, value: string }>\n  hoveredRoiTooltipX: number\n  hoveredRoiTooltipY: number\n  isReportModalVisible: boolean\n  isRoiDrawingActive: boolean\n  isRoiModificationActive: boolean\n  isRoiTranslationActive: boolean\n  isGoToModalVisible: boolean\n  isSelectedMagnificationValid: boolean\n  isSelectedXCoordinateValid: boolean\n  isSelectedYCoordinateValid: boolean\n  selectedXCoordinate?: number\n  validXCoordinateRange: number[]\n  selectedYCoordinate?: number\n  validYCoordinateRange: number[]\n  selectedMagnification?: number\n  areRoisHidden: boolean\n  pixelDataStatistics: {\n    [opticalPathIdentifier: string]: {\n      min: number\n      max: number\n      numFramesSampled: number\n    }\n  }\n  loadingFrames: Set<string>\n}\n\n/**\n * React component for interactive viewing of an individual digital slide,\n * which corresponds to one DICOM Series of DICOM Slide Microscopy images and\n * potentially one or more associated DICOM Series of DICOM SR documents.\n */\nclass SlideViewer extends React.Component<SlideViewerProps, SlideViewerState> {\n  private readonly findingOptions: dcmjs.sr.coding.CodedConcept[] = []\n\n  private readonly evaluationOptions: { [key: string]: EvaluationOptions[] } = {}\n\n  private readonly measurements: Measurement[] = []\n\n  private readonly geometryTypeOptions: { [key: string]: string[] } = {}\n\n  private readonly volumeViewportRef: React.RefObject<HTMLDivElement>\n\n  private readonly labelViewportRef: React.RefObject<HTMLDivElement>\n\n  private volumeViewer: dmv.viewer.VolumeImageViewer\n\n  private labelViewer?: dmv.viewer.LabelImageViewer\n\n  private readonly defaultRoiStyle: dmv.viewer.ROIStyleOptions = {\n    stroke: {\n      color: DEFAULT_ROI_STROKE_COLOR,\n      width: DEFAULT_ROI_STROKE_WIDTH\n    },\n    fill: {\n      color: DEFAULT_ROI_FILL_COLOR\n    },\n    image: {\n      circle: {\n        fill: {\n          color: DEFAULT_ROI_STROKE_COLOR\n        },\n        radius: DEFAULT_ROI_RADIUS\n      }\n    }\n  }\n\n  private roiStyles: {[key: string]: dmv.viewer.ROIStyleOptions} = {}\n\n  private defaultAnnotationStyles: {\n    [annotationUID: string]: {\n      opacity: number\n      color: number[]\n    }\n  } = {}\n\n  private readonly selectionColor: number[] = [140, 184, 198]\n\n  private readonly selectedRoiStyle: dmv.viewer.ROIStyleOptions = {\n    stroke: { color: [...this.selectionColor, 1], width: 3 },\n    fill: { color: [...this.selectionColor, 0.2] },\n    image: {\n      circle: {\n        radius: 5,\n        fill: { color: [...this.selectionColor, 1] }\n      }\n    }\n  }\n\n  constructor (props: SlideViewerProps) {\n    super(props)\n    console.info(\n      `view slide \"${this.props.slide.containerIdentifier}\": `,\n      this.props.slide\n    )\n    const geometryTypeOptions = [\n      'point',\n      'circle',\n      'box',\n      'polygon',\n      'line',\n      'freehandpolygon',\n      'freehandline'\n    ]\n    props.annotations.forEach((annotation: AnnotationSettings) => {\n      const finding = new dcmjs.sr.coding.CodedConcept(annotation.finding)\n      this.findingOptions.push(finding)\n      const key = _buildKey(finding)\n      if (annotation.geometryTypes !== undefined) {\n        this.geometryTypeOptions[key] = annotation.geometryTypes\n      } else {\n        this.geometryTypeOptions[key] = geometryTypeOptions\n      }\n      this.evaluationOptions[key] = []\n      if (annotation.evaluations !== undefined) {\n        annotation.evaluations.forEach(evaluation => {\n          this.evaluationOptions[key].push({\n            name: new dcmjs.sr.coding.CodedConcept(evaluation.name),\n            values: evaluation.values.map(value => {\n              return new dcmjs.sr.coding.CodedConcept(value)\n            })\n          })\n        })\n      }\n      if (annotation.measurements !== undefined) {\n        annotation.measurements.forEach(measurement => {\n          this.measurements.push({\n            name: new dcmjs.sr.coding.CodedConcept(measurement.name),\n            value: undefined,\n            unit: new dcmjs.sr.coding.CodedConcept(measurement.unit)\n          })\n        })\n      }\n      if (annotation.style != null) {\n        this.roiStyles[key] = _formatRoiStyle(annotation.style)\n      } else {\n        this.roiStyles[key] = this.defaultRoiStyle\n      }\n    })\n\n    this.componentSetup = this.componentSetup.bind(this)\n    this.componentCleanup = this.componentCleanup.bind(this)\n\n    this.onWindowResize = this.onWindowResize.bind(this)\n    this.handleRoiDrawing = this.handleRoiDrawing.bind(this)\n    this.handleRoiTranslation = this.handleRoiTranslation.bind(this)\n    this.handleRoiModification = this.handleRoiModification.bind(this)\n    this.handleRoiVisibilityChange = this.handleRoiVisibilityChange.bind(this)\n    this.handleRoiRemoval = this.handleRoiRemoval.bind(this)\n    this.handleRoiSelectionCancellation = this.handleRoiSelectionCancellation.bind(this)\n    this.handleAnnotationConfigurationCancellation = this.handleAnnotationConfigurationCancellation.bind(this)\n    this.handleAnnotationGeometryTypeSelection = this.handleAnnotationGeometryTypeSelection.bind(this)\n    this.handleAnnotationMeasurementActivation = this.handleAnnotationMeasurementActivation.bind(this)\n    this.handleAnnotationFindingSelection = this.handleAnnotationFindingSelection.bind(this)\n    this.handleAnnotationEvaluationSelection = this.handleAnnotationEvaluationSelection.bind(this)\n    this.handleAnnotationEvaluationClearance = this.handleAnnotationEvaluationClearance.bind(this)\n    this.handleAnnotationConfigurationCompletion = this.handleAnnotationConfigurationCompletion.bind(this)\n    this.handleAnnotationSelection = this.handleAnnotationSelection.bind(this)\n    this.handleAnnotationVisibilityChange = this.handleAnnotationVisibilityChange.bind(this)\n    this.handleAnnotationGroupVisibilityChange = this.handleAnnotationGroupVisibilityChange.bind(this)\n    this.handleAnnotationGroupStyleChange = this.handleAnnotationGroupStyleChange.bind(this)\n    this.handleRoiStyleChange = this.handleRoiStyleChange.bind(this)\n    this.handleGoTo = this.handleGoTo.bind(this)\n    this.handleXCoordinateSelection = this.handleXCoordinateSelection.bind(this)\n    this.handleYCoordinateSelection = this.handleYCoordinateSelection.bind(this)\n    this.handleMagnificationSelection = this.handleMagnificationSelection.bind(this)\n    this.handleSlidePositionSelection = this.handleSlidePositionSelection.bind(this)\n    this.handleSlidePositionSelectionCancellation = this.handleSlidePositionSelectionCancellation.bind(this)\n    this.handleReportGeneration = this.handleReportGeneration.bind(this)\n    this.handleReportVerification = this.handleReportVerification.bind(this)\n    this.handleReportCancellation = this.handleReportCancellation.bind(this)\n    this.handleSegmentVisibilityChange = this.handleSegmentVisibilityChange.bind(this)\n    this.handleSegmentStyleChange = this.handleSegmentStyleChange.bind(this)\n    this.handleMappingVisibilityChange = this.handleMappingVisibilityChange.bind(this)\n    this.handleMappingStyleChange = this.handleMappingStyleChange.bind(this)\n    this.handleOpticalPathVisibilityChange = this.handleOpticalPathVisibilityChange.bind(this)\n    this.handleOpticalPathStyleChange = this.handleOpticalPathStyleChange.bind(this)\n    this.handleOpticalPathActivityChange = this.handleOpticalPathActivityChange.bind(this)\n    this.handlePresentationStateSelection = this.handlePresentationStateSelection.bind(this)\n    this.handlePresentationStateReset = this.handlePresentationStateReset.bind(this)\n\n    const { volumeViewer, labelViewer } = _constructViewers({\n      clients: this.props.clients,\n      slide: this.props.slide,\n      preload: this.props.preload\n    })\n    this.volumeViewer = volumeViewer\n    this.labelViewer = labelViewer\n    this.volumeViewportRef = React.createRef<HTMLDivElement>()\n    this.labelViewportRef = React.createRef<HTMLDivElement>()\n\n    /**\n     * Deactivate all optical paths. Visibility will be set later, potentially\n     * using based on available presentation state instances.\n     */\n    this.volumeViewer.getAllOpticalPaths().forEach(opticalPath => {\n      this.volumeViewer.deactivateOpticalPath(opticalPath.identifier)\n    })\n\n    const [offset, size] = this.volumeViewer.boundingBox\n\n    this.state = {\n      selectedRoiUIDs: new Set(),\n      visibleRoiUIDs: new Set(),\n      visibleSegmentUIDs: new Set(),\n      visibleMappingUIDs: new Set(),\n      visibleAnnotationGroupUIDs: new Set(),\n      visibleOpticalPathIdentifiers: new Set(),\n      activeOpticalPathIdentifiers: new Set(),\n      presentationStates: [],\n      selectedFinding: undefined,\n      selectedEvaluations: [],\n      generatedReport: undefined,\n      isLoading: false,\n      isAnnotationModalVisible: false,\n      isSelectedRoiModalVisible: false,\n      isHoveredRoiTooltipVisible: false,\n      hoveredRoiTooltipX: 0,\n      hoveredRoiTooltipY: 0,\n      hoveredRoiAttributes: [],\n      isSelectedMagnificationValid: false,\n      isReportModalVisible: false,\n      isRoiDrawingActive: false,\n      isRoiTranslationActive: false,\n      isRoiModificationActive: false,\n      isGoToModalVisible: false,\n      isSelectedXCoordinateValid: false,\n      isSelectedYCoordinateValid: false,\n      selectedXCoordinate: undefined,\n      validXCoordinateRange: [offset[0], offset[0] + size[0]],\n      selectedYCoordinate: undefined,\n      validYCoordinateRange: [offset[1], offset[1] + size[1]],\n      selectedMagnification: undefined,\n      areRoisHidden: false,\n      pixelDataStatistics: {},\n      selectedPresentationStateUID: this.props.selectedPresentationStateUID,\n      loadingFrames: new Set()\n    }\n  }\n\n  componentDidUpdate (\n    previousProps: SlideViewerProps,\n    previousState: SlideViewerState\n  ): void {\n    /** Fetch data and update the viewports if the route has changed (\n     * i.e., if another series has been selected) or if the client has changed.\n     */\n    if (\n      this.props.location.pathname !== previousProps.location.pathname ||\n      this.props.studyInstanceUID !== previousProps.studyInstanceUID ||\n      this.props.seriesInstanceUID !== previousProps.seriesInstanceUID ||\n      this.props.slide !== previousProps.slide ||\n      this.props.clients !== previousProps.clients\n    ) {\n      if (this.volumeViewportRef.current != null) {\n        this.volumeViewportRef.current.innerHTML = ''\n      }\n      this.volumeViewer.cleanup()\n      if (this.labelViewer != null) {\n        if (this.labelViewportRef.current != null) {\n          this.labelViewportRef.current.innerHTML = ''\n        }\n        this.labelViewer.cleanup()\n      }\n      const { volumeViewer, labelViewer } = _constructViewers({\n        clients: this.props.clients,\n        slide: this.props.slide,\n        preload: this.props.preload\n      })\n      this.volumeViewer = volumeViewer\n      this.labelViewer = labelViewer\n\n      const activeOpticalPathIdentifiers: Set<string> = new Set()\n      const visibleOpticalPathIdentifiers: Set<string> = new Set()\n      this.volumeViewer.getAllOpticalPaths().forEach(opticalPath => {\n        const identifier = opticalPath.identifier\n        if (this.volumeViewer.isOpticalPathVisible(identifier)) {\n          visibleOpticalPathIdentifiers.add(identifier)\n        }\n        if (this.volumeViewer.isOpticalPathActive(identifier)) {\n          activeOpticalPathIdentifiers.add(identifier)\n        }\n      })\n\n      const [offset, size] = this.volumeViewer.boundingBox\n\n      this.setState({\n        visibleRoiUIDs: new Set(),\n        visibleSegmentUIDs: new Set(),\n        visibleMappingUIDs: new Set(),\n        visibleAnnotationGroupUIDs: new Set(),\n        visibleOpticalPathIdentifiers,\n        activeOpticalPathIdentifiers,\n        presentationStates: [],\n        loadingFrames: new Set(),\n        validXCoordinateRange: [offset[0], offset[0] + size[0]],\n        validYCoordinateRange: [offset[1], offset[1] + size[1]]\n      })\n      this.populateViewports()\n    }\n  }\n\n  /**\n   * Retrieve Presentation State instances that reference the any images of\n   * the currently selected series.\n   */\n  loadPresentationStates = (): void => {\n    console.info('search for Presentation State instances')\n    const client = this.props.clients[\n      StorageClasses.ADVANCED_BLENDING_PRESENTATION_STATE\n    ]\n    client.searchForInstances({\n      studyInstanceUID: this.props.studyInstanceUID,\n      queryParams: {\n        Modality: 'PR'\n      }\n    }).then((matchedInstances): void => {\n      if (matchedInstances == null) {\n        matchedInstances = []\n      }\n      matchedInstances.forEach((rawInstance, index) => {\n        const { dataset } = dmv.metadata.formatMetadata(rawInstance)\n        const instance = dataset as dmv.metadata.Instance\n        console.info(`retrieve PR instance \"${instance.SOPInstanceUID}\"`)\n        client.retrieveInstance({\n          studyInstanceUID: this.props.studyInstanceUID,\n          seriesInstanceUID: instance.SeriesInstanceUID,\n          sopInstanceUID: instance.SOPInstanceUID\n        }).then((retrievedInstance): void => {\n          const data = dcmjs.data.DicomMessage.readFile(retrievedInstance)\n          const { dataset } = dmv.metadata.formatMetadata(data.dict)\n          if (this.props.slide.areVolumeImagesMonochrome) {\n            const presentationState = (\n              dataset as\n              unknown as\n              dmv.metadata.AdvancedBlendingPresentationState\n            )\n            let doesMatch = false\n            presentationState.AdvancedBlendingSequence.forEach(blendingItem => {\n              doesMatch = this.props.slide.seriesInstanceUIDs.includes(\n                blendingItem.SeriesInstanceUID\n              )\n            }\n            )\n            if (doesMatch) {\n              console.info(\n                'include Advanced Blending Presentation State instance ' +\n                `\"${presentationState.SOPInstanceUID}\"`\n              )\n              if (\n                index === 0 &&\n                this.props.selectedPresentationStateUID == null\n              ) {\n                this.setPresentationState(presentationState)\n              } else {\n                if (\n                  presentationState.SOPInstanceUID ===\n                  this.props.selectedPresentationStateUID\n                ) {\n                  this.setPresentationState(presentationState)\n                }\n              }\n              this.setState(state => {\n                const mapping: {\n                  [sopInstanceUID: string]:\n                  dmv.metadata.AdvancedBlendingPresentationState\n                } = {}\n                state.presentationStates.forEach(instance => {\n                  mapping[instance.SOPInstanceUID] = instance\n                })\n                mapping[presentationState.SOPInstanceUID] = presentationState\n                return { presentationStates: Object.values(mapping) }\n              })\n            }\n          } else {\n            console.info(\n              `ignore presentation state \"${instance.SOPInstanceUID}\", ` +\n              'application of presentation states for color images ' +\n              'has not (yet) been implemented'\n            )\n          }\n        }).catch((error) => {\n          // eslint-disable-next-line @typescript-eslint/no-floating-promises\n          NotificationMiddleware.onError(\n            NotificationMiddlewareContext.SLIM,\n            new CustomError(\n              errorTypes.VISUALIZATION,\n              'Presentation State could not be loaded'\n            )\n          )\n          console.error(\n            'failed to load presentation state ' +\n            `of SOP instance \"${instance.SOPInstanceUID}\" ` +\n            `of series \"${instance.SeriesInstanceUID}\" ` +\n            `of study \"${this.props.studyInstanceUID}\": `,\n            error\n          )\n        })\n      })\n    }).catch((error) => {\n      console.error(error)\n      // eslint-disable-next-line @typescript-eslint/no-floating-promises\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.VISUALIZATION,\n          'Presentation State could not be loaded'\n        )\n      )\n    })\n  }\n\n  /**\n   * Set presentation state as specified by a DICOM Presentation State instance.\n   */\n  setPresentationState = (\n    presentationState: dmv.metadata.AdvancedBlendingPresentationState\n  ): void => {\n    const opticalPaths = this.volumeViewer.getAllOpticalPaths()\n    console.info(\n      `apply Presentation State instance \"${presentationState.SOPInstanceUID}\"`\n    )\n    const opticalPathStyles: {\n      [opticalPathIdentifier: string]: {\n        opacity: number\n        paletteColorLookupTable?: dmv.color.PaletteColorLookupTable\n        limitValues?: number[]\n      } | null\n    } = {}\n    opticalPaths.forEach(opticalPath => {\n      // First, deactivate and hide all optical paths and reset style\n      const identifier = opticalPath.identifier\n      this.volumeViewer.hideOpticalPath(identifier)\n      this.volumeViewer.deactivateOpticalPath(identifier)\n      const style = this.volumeViewer.getOpticalPathDefaultStyle(identifier)\n      this.volumeViewer.setOpticalPathStyle(identifier, style)\n\n      presentationState.AdvancedBlendingSequence.forEach(blendingItem => {\n        /**\n         * Referenced Instance Sequence should be used instead of Referenced\n         * Image Sequence, but that's easy to mix up and we have encountered\n         * implementations that get it wrong.\n         */\n        let refInstanceItems = blendingItem.ReferencedInstanceSequence\n        if (refInstanceItems === undefined) {\n          refInstanceItems = blendingItem.ReferencedImageSequence\n        }\n        if (refInstanceItems === undefined) {\n          return\n        }\n        refInstanceItems.forEach(imageItem => {\n          const isReferenced = opticalPath.sopInstanceUIDs.includes(\n            imageItem.ReferencedSOPInstanceUID\n          ) as boolean\n          if (isReferenced) {\n            let paletteColorLUT\n            if (blendingItem.PaletteColorLookupTableSequence != null) {\n              const cpLUTItem = blendingItem.PaletteColorLookupTableSequence[0]\n              paletteColorLUT = new dmv.color.PaletteColorLookupTable({\n                uid: (\n                  cpLUTItem.PaletteColorLookupTableUID != null\n                    ? cpLUTItem.PaletteColorLookupTableUID\n                    : ''\n                ),\n                redDescriptor:\n                  cpLUTItem.RedPaletteColorLookupTableDescriptor,\n                greenDescriptor:\n                  cpLUTItem.GreenPaletteColorLookupTableDescriptor,\n                blueDescriptor:\n                  cpLUTItem.BluePaletteColorLookupTableDescriptor,\n                redData: (\n                  (cpLUTItem.RedPaletteColorLookupTableData != null)\n                    ? new Uint16Array(\n                      cpLUTItem.RedPaletteColorLookupTableData\n                    )\n                    : undefined\n                ),\n                greenData: (\n                  (cpLUTItem.GreenPaletteColorLookupTableData != null)\n                    ? new Uint16Array(\n                      cpLUTItem.GreenPaletteColorLookupTableData\n                    )\n                    : undefined\n                ),\n                blueData: (\n                  (cpLUTItem.BluePaletteColorLookupTableData != null)\n                    ? new Uint16Array(\n                      cpLUTItem.BluePaletteColorLookupTableData\n                    )\n                    : undefined\n                ),\n                redSegmentedData: (\n                  (cpLUTItem.SegmentedRedPaletteColorLookupTableData != null)\n                    ? new Uint16Array(\n                      cpLUTItem.SegmentedRedPaletteColorLookupTableData\n                    )\n                    : undefined\n                ),\n                greenSegmentedData: (\n                  (cpLUTItem.SegmentedGreenPaletteColorLookupTableData != null)\n                    ? new Uint16Array(\n                      cpLUTItem.SegmentedGreenPaletteColorLookupTableData\n                    )\n                    : undefined\n                ),\n                blueSegmentedData: (\n                  (cpLUTItem.SegmentedBluePaletteColorLookupTableData != null)\n                    ? new Uint16Array(\n                      cpLUTItem.SegmentedBluePaletteColorLookupTableData\n                    )\n                    : undefined\n                )\n              })\n            }\n\n            let limitValues\n            if (blendingItem.SoftcopyVOILUTSequence != null) {\n              const voiLUTItem = blendingItem.SoftcopyVOILUTSequence[0]\n              const windowCenter = voiLUTItem.WindowCenter\n              const windowWidth = voiLUTItem.WindowWidth\n              limitValues = [\n                windowCenter - windowWidth * 0.5,\n                windowCenter + windowWidth * 0.5\n              ]\n            }\n\n            opticalPathStyles[identifier] = {\n              opacity: 1,\n              paletteColorLookupTable: paletteColorLUT,\n              limitValues: limitValues\n            }\n          }\n        })\n      })\n    })\n\n    const selectedOpticalPathIdentifiers: Set<string> = new Set()\n    Object.keys(opticalPathStyles).forEach(identifier => {\n      const styleOptions = opticalPathStyles[identifier]\n      if (styleOptions != null) {\n        this.volumeViewer.setOpticalPathStyle(identifier, styleOptions)\n        this.volumeViewer.activateOpticalPath(identifier)\n        this.volumeViewer.showOpticalPath(identifier)\n        selectedOpticalPathIdentifiers.add(identifier)\n      } else {\n        this.volumeViewer.hideOpticalPath(identifier)\n        this.volumeViewer.deactivateOpticalPath(identifier)\n      }\n    })\n    const searchParams = new URLSearchParams(this.props.location.search)\n    searchParams.set('state', presentationState.SOPInstanceUID)\n    this.props.navigate(\n      {\n        pathname: this.props.location.pathname,\n        search: searchParams.toString()\n      },\n      { replace: true }\n    )\n    this.setState(state => ({\n      activeOpticalPathIdentifiers: selectedOpticalPathIdentifiers,\n      visibleOpticalPathIdentifiers: selectedOpticalPathIdentifiers,\n      selectedPresentationStateUID: presentationState.SOPInstanceUID\n    }))\n  }\n\n  getRoiStyle = (key?: string): dmv.viewer.ROIStyleOptions => {\n    if (key == null) {\n      return this.defaultRoiStyle\n    }\n    if (this.roiStyles[key] !== undefined) {\n      return this.roiStyles[key]\n    }\n    return this.defaultRoiStyle\n  }\n\n  /**\n   * Retrieve Structured Report instances that contain regions of interests\n   * with 3D spatial coordinates defined in the same frame of reference as the\n   * currently selected series and add them to the VOLUME image viewer.\n   */\n  addAnnotations = (): void => {\n    console.info('search for Comprehensive 3D SR instances')\n    const client = this.props.clients[StorageClasses.COMPREHENSIVE_3D_SR]\n    client.searchForInstances({\n      studyInstanceUID: this.props.studyInstanceUID,\n      queryParams: {\n        Modality: 'SR'\n      }\n    }).then((matchedInstances): void => {\n      if (matchedInstances == null) {\n        matchedInstances = []\n      }\n      matchedInstances.forEach(i => {\n        const { dataset } = dmv.metadata.formatMetadata(i)\n        const instance = dataset as dmv.metadata.Instance\n        if (instance.SOPClassUID === StorageClasses.COMPREHENSIVE_3D_SR) {\n          console.info(`retrieve SR instance \"${instance.SOPInstanceUID}\"`)\n          client.retrieveInstance({\n            studyInstanceUID: this.props.studyInstanceUID,\n            seriesInstanceUID: instance.SeriesInstanceUID,\n            sopInstanceUID: instance.SOPInstanceUID\n          }).then((retrievedInstance): void => {\n            const data = dcmjs.data.DicomMessage.readFile(retrievedInstance)\n            const { dataset } = dmv.metadata.formatMetadata(data.dict)\n            const report = dataset as unknown as dmv.metadata.Comprehensive3DSR\n            /*\n             * Perform a couple of checks to ensure the document content of the\n             * report fullfils the requirements of the application.\n             */\n            if (!_implementsTID1500(report)) {\n              console.debug(\n                `ignore SR document \"${report.SOPInstanceUID}\" ` +\n                'because it is not structured according to template ' +\n                'TID 1500 \"MeasurementReport\"'\n              )\n              return\n            }\n            if (!_describesSpecimenSubject(report)) {\n              console.debug(\n                `ignore SR document \"${report.SOPInstanceUID}\" ` +\n                'because it does not describe a specimen subject'\n              )\n              return\n            }\n            if (!_containsROIAnnotations(report)) {\n              console.debug(\n                `ignore SR document \"${report.SOPInstanceUID}\" ` +\n                'because it does not contain any suitable ROI annotations'\n              )\n              return\n            }\n\n            const content = new MeasurementReport(report)\n            content.ROIs.forEach(roi => {\n              console.info(`add ROI \"${roi.uid}\"`)\n              const scoord3d = roi.scoord3d\n              const image = this.props.slide.volumeImages[0]\n              if (scoord3d.frameOfReferenceUID === image.FrameOfReferenceUID) {\n                /*\n                 * ROIs may get assigned new UIDs upon re-rendering of the\n                 * page and we need to ensure that we don't add them twice.\n                 * The same ROI may be stored in multiple SR documents and\n                 * we don't want them to show up twice.\n                 * TODO: We should probably either \"merge\" measurements and\n                 * quantitative evaluations or pick the ROI from the \"best\"\n                 * available report (COMPLETE and VERIFIED).\n                 */\n                const doesROIExist = this.volumeViewer.getAllROIs().some(\n                  (otherROI: dmv.roi.ROI): boolean => {\n                    return _areROIsEqual(otherROI, roi)\n                  }\n                )\n                if (!doesROIExist) {\n                  try {\n                    // Add ROI without style such that it won't be visible.\n                    this.volumeViewer.addROI(roi, {})\n                  } catch {\n                    console.error(`could not add ROI \"${roi.uid}\"`)\n                  }\n                } else {\n                  console.debug(`skip already existing ROI \"${roi.uid}\"`)\n                }\n              } else {\n                console.debug(\n                  `skip ROI \"${roi.uid}\" ` +\n                  `of SR document \"${report.SOPInstanceUID}\"` +\n                  'because it is defined in another frame of reference'\n                )\n              }\n            })\n          }).catch((error) => {\n            // eslint-disable-next-line @typescript-eslint/no-floating-promises\n            NotificationMiddleware.onError(\n              NotificationMiddlewareContext.SLIM,\n              new CustomError(\n                errorTypes.VISUALIZATION,\n                'Annotations could not be loaded'\n              )\n            )\n            console.error(\n              'failed to load ROIs ' +\n              `of SOP instance \"${instance.SOPInstanceUID}\" ` +\n              `of series \"${instance.SeriesInstanceUID}\" ` +\n              `of study \"${this.props.studyInstanceUID}\": `,\n              error\n            )\n          })\n          /*\n           * React is not aware of the fact that ROIs have been added via the\n           * viewer (the viewport is a ref object) and won't show the\n           * annotations in the user interface unless an update is forced.\n           */\n          this.forceUpdate()\n        }\n      })\n    }).catch((error) => {\n      console.error(error)\n      // eslint-disable-next-line @typescript-eslint/no-floating-promises\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.VISUALIZATION,\n          'Annotations could not be loaded'\n        )\n      )\n    })\n  }\n\n  /**\n   * Retrieve Microscopy Bulk Simple Annotations instances that contain\n   * annotation groups defined in the same frame of reference as the currently\n   * selected series and add them to the VOLUME image viewer.\n   */\n  addAnnotationGroups = (): void => {\n    console.info('search for Microscopy Bulk Simple Annotations instances')\n    const client = this.props.clients[\n      StorageClasses.MICROSCOPY_BULK_SIMPLE_ANNOTATION\n    ]\n    client.searchForSeries({\n      studyInstanceUID: this.props.studyInstanceUID,\n      queryParams: {\n        Modality: 'ANN'\n      }\n    }).then((matchedSeries): void => {\n      if (matchedSeries == null) {\n        matchedSeries = []\n      }\n      matchedSeries.forEach(s => {\n        const { dataset } = dmv.metadata.formatMetadata(s)\n        const series = dataset as dmv.metadata.Series\n        client.retrieveSeriesMetadata({\n          studyInstanceUID: this.props.studyInstanceUID,\n          seriesInstanceUID: series.SeriesInstanceUID\n        }).then((retrievedMetadata): void => {\n          const annotations: dmv.metadata.MicroscopyBulkSimpleAnnotations[] = retrievedMetadata.map(metadata => {\n            return new dmv.metadata.MicroscopyBulkSimpleAnnotations({\n              metadata\n            })\n          })\n          // annotations = annotations.filter(ann => {\n          //   const refImage = this.props.slide.volumeImages[0]\n          //   return (\n          //     ann.FrameOfReferenceUID === refImage.FrameOfReferenceUID &&\n          //     ann.ContainerIdentifier === refImage.ContainerIdentifier\n          //   )\n          // })\n          annotations.forEach(ann => {\n            try {\n              this.volumeViewer.addAnnotationGroups(ann)\n            } catch (error: any) {\n              // eslint-disable-next-line @typescript-eslint/no-floating-promises\n              NotificationMiddleware.onError(\n                NotificationMiddlewareContext.SLIM,\n                new CustomError(\n                  errorTypes.VISUALIZATION,\n                  'Microscopy Bulk Simple Annotations cannot be displayed.'\n                )\n              )\n              // eslint-disable-next-line @typescript-eslint/no-floating-promises\n              console.error('failed to add annotation groups:', error)\n            }\n            ann.AnnotationGroupSequence.forEach(item => {\n              const annotationGroupUID = item.AnnotationGroupUID\n              const finding = item.AnnotationPropertyTypeCodeSequence[0]\n              const key = _buildKey(finding)\n              const style = this.roiStyles[key]\n              // eslint-disable-next-line @typescript-eslint/prefer-optional-chain\n              if (style != null && style.fill != null) {\n                this.volumeViewer.setAnnotationGroupStyle(\n                  annotationGroupUID,\n                  { color: style.fill.color }\n                )\n              }\n            })\n          })\n          /*\n           * React is not aware of the fact that annotation groups have been\n           * added via the viewer (the underlying HTML viewport element is a\n           * ref object) and won't show the annotation groups in the user\n           * interface unless an update is forced.\n           */\n          this.forceUpdate()\n        }).catch((error) => {\n          console.error(error)\n          // eslint-disable-next-line @typescript-eslint/no-floating-promises\n          NotificationMiddleware.onError(\n            NotificationMiddlewareContext.SLIM,\n            new CustomError(\n              errorTypes.VISUALIZATION,\n              'Retrieval of metadata of Microscopy Bulk Simple Annotations ' +\n              'instances failed.'\n            )\n          )\n        })\n      })\n    }).catch((error) => {\n      console.error(error)\n      // eslint-disable-next-line @typescript-eslint/no-floating-promises\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.VISUALIZATION,\n          'Search for Microscopy Bulk Simple Annotations instances failed.'\n        )\n      )\n    })\n  }\n\n  /**\n   * Retrieve Segmentation instances that contain segments defined in the same\n   * frame of reference as the currently selected series and add them to the\n   * VOLUME image viewer.\n   */\n  addSegmentations = (): void => {\n    console.info('search for Segmentation instances')\n    const client = this.props.clients[StorageClasses.SEGMENTATION]\n    client.searchForSeries({\n      studyInstanceUID: this.props.studyInstanceUID,\n      queryParams: {\n        Modality: 'SEG'\n      }\n    }).then((matchedSeries): void => {\n      if (matchedSeries == null) {\n        matchedSeries = []\n      }\n      matchedSeries.forEach((s, i) => {\n        const { dataset } = dmv.metadata.formatMetadata(s)\n        const series = dataset as dmv.metadata.Series\n        client.retrieveSeriesMetadata({\n          studyInstanceUID: this.props.studyInstanceUID,\n          seriesInstanceUID: series.SeriesInstanceUID\n        }).then((retrievedMetadata): void => {\n          const segmentations: dmv.metadata.Segmentation[] = []\n          retrievedMetadata.forEach(metadata => {\n            const seg = new dmv.metadata.Segmentation({ metadata })\n            const refImage = this.props.slide.volumeImages[0]\n            if (\n              seg.FrameOfReferenceUID === refImage.FrameOfReferenceUID &&\n              seg.ContainerIdentifier === refImage.ContainerIdentifier\n            ) {\n              segmentations.push(seg)\n            }\n          })\n          if (segmentations.length > 0) {\n            try {\n              this.volumeViewer.addSegments(segmentations)\n            } catch (error: any) {\n              // eslint-disable-next-line @typescript-eslint/no-floating-promises\n              NotificationMiddleware.onError(\n                NotificationMiddlewareContext.SLIM,\n                new CustomError(\n                  errorTypes.VISUALIZATION,\n                  'Segmentations cannot be displayed'\n                )\n              )\n              console.error('failed to add segments: ', error)\n            }\n            /*\n           * React is not aware of the fact that segments have been added via\n           * the viewer (the underlying HTML viewport element is a ref object)\n           * and won't show the segments in the user interface unless an update\n           * is forced.\n           */\n            this.forceUpdate()\n          }\n        }).catch((error) => {\n          console.error(error)\n          // eslint-disable-next-line @typescript-eslint/no-floating-promises\n          NotificationMiddleware.onError(\n            NotificationMiddlewareContext.SLIM,\n            new CustomError(\n              errorTypes.VISUALIZATION,\n              'Retrieval of metadata of Segmentation instances failed.'\n            )\n          )\n        })\n      })\n    }).catch((error) => {\n      console.error(error)\n      // eslint-disable-next-line @typescript-eslint/no-floating-promises\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.VISUALIZATION,\n          'Search for Segmentation instances failed.'\n        )\n      )\n    })\n  }\n\n  /**\n   * Retrieve Parametric Map instances that contain mappings defined in the same\n   * frame of reference as the currently selected series and add them to the\n   * VOLUME image viewer.\n   */\n  addParametricMaps = (): void => {\n    console.info('search for Parametric Map instances')\n    const client = this.props.clients[StorageClasses.PARAMETRIC_MAP]\n    client.searchForSeries({\n      studyInstanceUID: this.props.studyInstanceUID,\n      queryParams: {\n        Modality: 'OT'\n      }\n    }).then((matchedSeries): void => {\n      if (matchedSeries == null) {\n        matchedSeries = []\n      }\n      matchedSeries.forEach(s => {\n        const { dataset } = dmv.metadata.formatMetadata(s)\n        const series = dataset as dmv.metadata.Series\n        client.retrieveSeriesMetadata({\n          studyInstanceUID: this.props.studyInstanceUID,\n          seriesInstanceUID: series.SeriesInstanceUID\n        }).then((retrievedMetadata): void => {\n          const parametricMaps: dmv.metadata.ParametricMap[] = []\n          retrievedMetadata.forEach(metadata => {\n            const pm = new dmv.metadata.ParametricMap({ metadata })\n            const refImage = this.props.slide.volumeImages[0]\n            if (\n              pm.FrameOfReferenceUID === refImage.FrameOfReferenceUID &&\n              pm.ContainerIdentifier === refImage.ContainerIdentifier\n            ) {\n              parametricMaps.push(pm)\n            } else {\n              console.warn(\n                `skip Parametric Map instance \"${pm.SOPInstanceUID}\"`\n              )\n            }\n          })\n          if (parametricMaps.length > 0) {\n            try {\n              this.volumeViewer.addParameterMappings(parametricMaps)\n            } catch (error: any) {\n              // eslint-disable-next-line @typescript-eslint/no-floating-promises\n              NotificationMiddleware.onError(\n                NotificationMiddlewareContext.SLIM,\n                new CustomError(\n                  errorTypes.VISUALIZATION,\n                  'Parametric Map cannot be displayed'\n                )\n              )\n              console.error('failed to add mappings: ', error)\n            }\n            /*\n           * React is not aware of the fact that mappings have been added via\n           * the viewer (the underlying HTML viewport element is a ref object)\n           * and won't show the mappings in the user interface unless an update\n           * is forced.\n           */\n            this.forceUpdate()\n          }\n        }).catch((error) => {\n          console.error(error)\n          // eslint-disable-next-line @typescript-eslint/no-floating-promises\n          NotificationMiddleware.onError(\n            NotificationMiddlewareContext.SLIM,\n            new CustomError(\n              errorTypes.VISUALIZATION,\n              'Retrieval of metadata of Parametric Map instances failed.'\n            )\n          )\n        })\n      })\n    }).catch((error) => {\n      console.error(error)\n      // eslint-disable-next-line @typescript-eslint/no-floating-promises\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.VISUALIZATION,\n          'Search for Parametric Map instances failed.'\n        )\n      )\n    })\n  }\n\n  /**\n   * Populate viewports of the VOLUME and LABEL image viewers.\n   */\n  populateViewports = (): void => {\n    console.info('populate viewports...')\n    this.setState({\n      isLoading: true,\n      presentationStates: []\n    })\n\n    if (this.volumeViewportRef.current != null) {\n      this.volumeViewer.render({ container: this.volumeViewportRef.current })\n    }\n    if (\n      this.labelViewportRef.current != null &&\n      this.labelViewer != null\n    ) {\n      this.labelViewer.render({ container: this.labelViewportRef.current })\n    }\n\n    // State update will also ensure that the component is re-rendered.\n    this.setState({ isLoading: false })\n\n    this.setDefaultPresentationState()\n    this.loadPresentationStates()\n\n    this.addAnnotations()\n    this.addAnnotationGroups()\n    this.addSegmentations()\n    this.addParametricMaps()\n  }\n\n  onRoiModified = (event: CustomEventInit): void => {\n    // Update state to trigger rendering\n    this.setState(state => ({\n      visibleRoiUIDs: new Set(state.visibleRoiUIDs)\n    }))\n  }\n\n  onWindowResize = (event: Event): void => {\n    console.info('resize viewports')\n    this.volumeViewer.resize()\n    if (this.labelViewer != null) {\n      this.labelViewer.resize()\n    }\n  }\n\n  onRoiDrawn = (event: CustomEventInit): void => {\n    const roi = event.detail.payload as dmv.roi.ROI\n    const selectedFinding = this.state.selectedFinding\n    const selectedEvaluations = this.state.selectedEvaluations\n    if (roi !== undefined && selectedFinding !== undefined) {\n      console.debug(`add ROI \"${roi.uid}\"`)\n      const findingItem = new dcmjs.sr.valueTypes.CodeContentItem({\n        name: new dcmjs.sr.coding.CodedConcept({\n          value: '121071',\n          meaning: 'Finding',\n          schemeDesignator: 'DCM'\n        }),\n        value: selectedFinding,\n        relationshipType: 'CONTAINS'\n      })\n      roi.addEvaluation(findingItem)\n      selectedEvaluations.forEach((evaluation: Evaluation) => {\n        const item = new dcmjs.sr.valueTypes.CodeContentItem({\n          name: evaluation.name,\n          value: evaluation.value,\n          relationshipType: 'CONTAINS'\n        })\n        roi.addEvaluation(item)\n      })\n      const key = _buildKey(selectedFinding)\n      const style = this.getRoiStyle(key)\n      this.volumeViewer.addROI(roi, style)\n      this.setState(state => {\n        const visibleRoiUIDs = state.visibleRoiUIDs\n        visibleRoiUIDs.add(roi.uid)\n        return { visibleRoiUIDs }\n      })\n    } else {\n      console.debug(`could not add ROI \"${roi.uid}\"`)\n    }\n  }\n\n  onRoiDoubleClicked = (event: CustomEventInit): void => {\n    const selectedRoi = event.detail.payload as dmv.roi.ROI\n    if (selectedRoi != null) {\n      this.setState({\n        isSelectedRoiModalVisible: true\n      })\n    } else {\n      this.setState({\n        isSelectedRoiModalVisible: false\n      })\n    }\n  }\n\n  setHoveredRoiAttributes = (hoveredRoi: dmv.roi.ROI): void => {\n    const attributes: Array<{ name: string, value: string }> = []\n    hoveredRoi.evaluations.forEach((\n      item: (\n        dcmjs.sr.valueTypes.TextContentItem |\n        dcmjs.sr.valueTypes.CodeContentItem\n      )\n    ) => {\n      const nameValue = item.ConceptNameCodeSequence[0].CodeValue\n      const nameMeaning = item.ConceptNameCodeSequence[0].CodeMeaning\n      const name = `${nameMeaning}`\n      if (item.ValueType === dcmjs.sr.valueTypes.ValueTypes.CODE) {\n        const codeContentItem = item as dcmjs.sr.valueTypes.CodeContentItem\n        const valueMeaning = codeContentItem.ConceptCodeSequence[0].CodeMeaning\n        // For consistency with Segment and Annotation Group\n        if (nameValue === '276214006') {\n          attributes.push({\n            name: 'Property category',\n            value: `${valueMeaning}`\n          })\n        } else if (nameValue === '121071') {\n          attributes.push({\n            name: 'Property type',\n            value: `${valueMeaning}`\n          })\n        } else if (nameValue === '111001') {\n          attributes.push({\n            name: 'Algorithm Name',\n            value: `${valueMeaning}`\n          })\n        } else {\n          attributes.push({\n            name: name,\n            value: `${valueMeaning}`\n          })\n        }\n      } else if (item.ValueType === dcmjs.sr.valueTypes.ValueTypes.TEXT) {\n        const textContentItem = item as dcmjs.sr.valueTypes.TextContentItem\n        attributes.push({\n          name: name,\n          value: textContentItem.TextValue\n        })\n      }\n    })\n\n    this.setState({ hoveredRoiAttributes: attributes })\n  }\n\n  onPointerMove = (event: CustomEventInit): void => {\n    const { feature: hoveredRoi, event: evt } = event.detail.payload\n    if (hoveredRoi != null) {\n      const originalEvent = evt.originalEvent\n      this.setHoveredRoiAttributes(hoveredRoi)\n      this.setState({\n        isHoveredRoiTooltipVisible: true,\n        hoveredRoi,\n        hoveredRoiTooltipX: originalEvent.clientX,\n        hoveredRoiTooltipY: originalEvent.clientY\n      })\n    } else {\n      this.setState({\n        isHoveredRoiTooltipVisible: false\n      })\n    }\n  }\n\n  onRoiSelected = (event: CustomEventInit): void => {\n    const selectedRoi = event.detail.payload as dmv.roi.ROI\n    if (selectedRoi != null) {\n      console.debug(`selected ROI \"${selectedRoi.uid}\"`)\n      this.volumeViewer.setROIStyle(selectedRoi.uid, this.selectedRoiStyle)\n      const key = _getRoiKey(selectedRoi)\n      this.volumeViewer.getAllROIs().forEach((roi) => {\n        if (roi.uid !== selectedRoi.uid) {\n          this.volumeViewer.setROIStyle(roi.uid, this.getRoiStyle(key))\n        }\n      })\n      this.setState({\n        selectedRoiUIDs: new Set([selectedRoi.uid]),\n        selectedRoi: selectedRoi\n      })\n    } else {\n      this.setState({\n        selectedRoiUIDs: new Set(),\n        selectedRoi: undefined\n      })\n    }\n  }\n\n  handleRoiSelectionCancellation (): void {\n    this.setState({\n      isSelectedRoiModalVisible: false\n    })\n  }\n\n  onLoadingStarted = (event: CustomEventInit): void => {\n    this.setState({ isLoading: true })\n  }\n\n  onLoadingEnded = (event: CustomEventInit): void => {\n    this.setState({ isLoading: false })\n  }\n\n  onFrameLoadingStarted = (event: CustomEventInit): void => {\n    const frameInfo: {\n      studyInstanceUID: string\n      seriesInstanceUID: string\n      sopInstanceUID: string\n      sopClassUID: string\n      frameNumber: string\n      channelIdentifier: string\n    } = event.detail.payload\n    const key: string = `${frameInfo.sopInstanceUID}-${frameInfo.frameNumber}`\n    this.setState(state => {\n      state.loadingFrames.add(key)\n      return state\n    })\n  }\n\n  onFrameLoadingError = (event: CustomEventInit): void => {\n    console.error('Failed to load frame')\n  }\n\n  onLoadingError = (event: CustomEventInit): void => {\n    console.error('Failed to load data')\n    // eslint-disable-next-line @typescript-eslint/no-floating-promises\n    const message = (event.detail?.payload?.message === null ? 'Failed to load data' : event.detail?.payload?.message) as string\n    NotificationMiddleware.onError(\n      NotificationMiddlewareContext.SLIM,\n      new CustomError(\n        errorTypes.VISUALIZATION,\n        message\n      ) as any\n    )\n  }\n\n  onFrameLoadingEnded = (event: CustomEventInit): void => {\n    const frameInfo: {\n      studyInstanceUID: string\n      seriesInstanceUID: string\n      sopInstanceUID: string\n      sopClassUID: string\n      frameNumber: string\n      channelIdentifier: string\n      pixelArray: Uint8Array|Uint16Array|Float32Array|null\n    } = event.detail.payload\n    const key = `${frameInfo.sopInstanceUID}-${frameInfo.frameNumber}`\n    this.setState(state => {\n      state.loadingFrames.delete(key)\n      let isLoading: boolean = false\n      if (state.loadingFrames.size > 0) {\n        isLoading = true\n      }\n      return {\n        isLoading,\n        loadingFrames: state.loadingFrames\n      }\n    })\n    if (\n      frameInfo.sopClassUID === StorageClasses.VL_WHOLE_SLIDE_MICROSCOPY_IMAGE &&\n      this.props.slide.areVolumeImagesMonochrome\n    ) {\n      const opticalPathIdentifier = frameInfo.channelIdentifier\n      if (\n        !(opticalPathIdentifier in this.state.pixelDataStatistics) &&\n        frameInfo.pixelArray != null\n      ) {\n        /*\n         * There are limits on the number of arguments Math.min and Math.max\n         * functions can accept. Therefore, we compute values in smaller chunks.\n         */\n        const size = 2 ** 16\n        const chunks = Math.ceil(frameInfo.pixelArray.length / size)\n        let offset = 0\n        const minValues: number[] = []\n        const maxValues: number[] = []\n        for (let i = 0; i < chunks; i++) {\n          offset = i * size\n          const pixels = frameInfo.pixelArray.slice(offset, offset + size)\n          minValues.push(Math.min(...pixels))\n          maxValues.push(Math.max(...pixels))\n        }\n        const min = Math.min(...minValues)\n        const max = Math.max(...maxValues)\n        this.setState(state => {\n          const stats = state.pixelDataStatistics\n          if (stats[opticalPathIdentifier] != null) {\n            stats[opticalPathIdentifier] = {\n              min: Math.min(stats[opticalPathIdentifier].min, min),\n              max: Math.max(stats[opticalPathIdentifier].max, max),\n              numFramesSampled: stats[opticalPathIdentifier].numFramesSampled + 1\n            }\n          } else {\n            stats[opticalPathIdentifier] = {\n              min: min,\n              max: max,\n              numFramesSampled: 1\n            }\n          }\n          if (state.selectedPresentationStateUID == null) {\n            const style = {\n              ...this.volumeViewer.getOpticalPathStyle(opticalPathIdentifier)\n            }\n            style.limitValues = [\n              stats[opticalPathIdentifier].min,\n              stats[opticalPathIdentifier].max\n            ]\n            this.volumeViewer.setOpticalPathStyle(opticalPathIdentifier, style)\n          }\n          return state\n        })\n      }\n    }\n  }\n\n  onRoiRemoved = (event: CustomEventInit): void => {\n    const roi = event.detail.payload as dmv.roi.ROI\n    console.debug(`removed ROI \"${roi.uid}\"`)\n  }\n\n  componentCleanup (): void {\n    document.body.removeEventListener(\n      'dicommicroscopyviewer_roi_drawn',\n      this.onRoiDrawn\n    )\n    document.body.removeEventListener(\n      'dicommicroscopyviewer_roi_selected',\n      this.onRoiSelected\n    )\n    document.body.removeEventListener(\n      'dicommicroscopyviewer_roi_double_clicked',\n      this.onRoiDoubleClicked\n    )\n    document.body.removeEventListener(\n      'dicommicroscopyviewer_pointer_move',\n      this.onPointerMove\n    )\n    document.body.removeEventListener(\n      'dicommicroscopyviewer_roi_removed',\n      this.onRoiRemoved\n    )\n    document.body.removeEventListener(\n      'dicommicroscopyviewer_roi_modified',\n      this.onRoiModified\n    )\n    document.body.removeEventListener(\n      'dicommicroscopyviewer_loading_started',\n      this.onLoadingStarted\n    )\n    document.body.removeEventListener(\n      'dicommicroscopyviewer_loading_ended',\n      this.onLoadingEnded\n    )\n    document.body.removeEventListener(\n      'dicommicroscopyviewer_frame_loading_started',\n      this.onFrameLoadingStarted\n    )\n    document.body.removeEventListener(\n      'dicommicroscopyviewer_frame_loading_ended',\n      this.onFrameLoadingEnded\n    )\n    document.body.removeEventListener(\n      'keyup',\n      this.onKeyUp\n    )\n    window.removeEventListener('resize', this.onWindowResize)\n\n    this.volumeViewer.cleanup()\n    if (this.labelViewer != null) {\n      this.labelViewer.cleanup()\n    }\n    /*\n     * FIXME: React appears to not clean the content of referenced\n     * HTMLDivElement objects when the page is reloaded. As a consequence,\n     * optical paths and other display items cannot be toggled or updated after\n     * a manual page reload. I have tried using ref callbacks and passing the\n     * ref objects from the parent component via the props. Both didn't work\n     * either.\n     */\n  }\n\n  onKeyUp = (event: KeyboardEvent): void => {\n    if (event.key === 'Escape') {\n      if (this.state.isRoiDrawingActive) {\n        console.info('deactivate drawing of ROIs')\n        this.volumeViewer.deactivateDrawInteraction()\n        this.volumeViewer.activateSelectInteraction({})\n      } else if (this.state.isRoiModificationActive) {\n        console.info('deactivate modification of ROIs')\n        this.volumeViewer.deactivateModifyInteraction()\n        this.volumeViewer.activateSelectInteraction({})\n      } else if (this.state.isRoiTranslationActive) {\n        console.info('deactivate modification of ROIs')\n        this.volumeViewer.deactivateTranslateInteraction()\n        this.volumeViewer.activateSelectInteraction({})\n      }\n      this.setState({\n        isAnnotationModalVisible: false,\n        isSelectedRoiModalVisible: false,\n        isRoiTranslationActive: false,\n        isRoiDrawingActive: false,\n        isRoiModificationActive: false,\n        isGoToModalVisible: false\n      })\n    } else if (event.altKey) {\n      if (event.code === 'KeyD') {\n        this.handleRoiDrawing()\n      } else if (event.code === 'KeyM') {\n        this.handleRoiModification()\n      } else if (event.code === 'KeyT') {\n        this.handleRoiTranslation()\n      } else if (event.code === 'KeyR') {\n        this.handleRoiRemoval()\n      } else if (event.code === 'KeyV') {\n        this.handleRoiVisibilityChange()\n      } else if (event.code === 'KeyS') {\n        this.handleReportGeneration()\n      } else if (event.code === 'KeyG') {\n        this.handleGoTo()\n      }\n    }\n  }\n\n  componentWillUnmount (): void {\n    this.volumeViewer.cleanup()\n    if (this.labelViewer != null) {\n      this.labelViewer.cleanup()\n    }\n    window.removeEventListener('beforeunload', this.componentCleanup)\n  }\n\n  componentSetup (): void {\n    document.body.addEventListener(\n      'dicommicroscopyviewer_roi_drawn',\n      this.onRoiDrawn\n    )\n    document.body.addEventListener(\n      'dicommicroscopyviewer_roi_selected',\n      this.onRoiSelected\n    )\n    document.body.addEventListener(\n      'dicommicroscopyviewer_roi_double_clicked',\n      this.onRoiDoubleClicked\n    )\n    document.body.addEventListener(\n      'dicommicroscopyviewer_pointer_move',\n      this.onPointerMove\n    )\n    document.body.addEventListener(\n      'dicommicroscopyviewer_roi_removed',\n      this.onRoiRemoved\n    )\n    document.body.addEventListener(\n      'dicommicroscopyviewer_roi_modified',\n      this.onRoiModified\n    )\n    document.body.addEventListener(\n      'dicommicroscopyviewer_loading_started',\n      this.onLoadingStarted\n    )\n    document.body.addEventListener(\n      'dicommicroscopyviewer_loading_ended',\n      this.onLoadingEnded\n    )\n    document.body.addEventListener(\n      'dicommicroscopyviewer_loading_error',\n      this.onLoadingError\n    )\n    document.body.addEventListener(\n      'dicommicroscopyviewer_frame_loading_started',\n      this.onFrameLoadingStarted\n    )\n    document.body.addEventListener(\n      'dicommicroscopyviewer_frame_loading_ended',\n      this.onFrameLoadingEnded\n    )\n    document.body.addEventListener(\n      'dicommicroscopyviewer_frame_loading_error',\n      this.onFrameLoadingError\n    )\n    document.body.addEventListener(\n      'keyup',\n      this.onKeyUp\n    )\n    window.addEventListener('beforeunload', this.componentCleanup)\n    window.addEventListener('resize', this.onWindowResize)\n  }\n\n  componentDidMount (): void {\n    this.componentSetup()\n    this.populateViewports()\n\n    if (!this.props.slide.areVolumeImagesMonochrome) {\n      let hasICCProfile = false\n      const image = this.props.slide.volumeImages[0]\n      const metadataItem = image.OpticalPathSequence[0]\n      if (metadataItem.ICCProfile == null) {\n        if ('OpticalPathSequence' in image.bulkdataReferences) {\n          // @ts-expect-error\n          const bulkdataItem = image.bulkdataReferences.OpticalPathSequence[0]\n          if ('ICCProfile' in bulkdataItem) {\n            hasICCProfile = true\n          }\n        }\n      } else {\n        hasICCProfile = true\n      }\n      if (!hasICCProfile) {\n        // eslint-disable-next-line @typescript-eslint/no-floating-promises\n        message.warning('No ICC Profile was found for color images')\n      }\n    }\n  }\n\n  /**\n   * Handler that gets called when a finding has been selected for annotation.\n   *\n   * @param value - Code value of the coded finding that got selected\n   * @param option - Option that got selected\n   */\n  handleAnnotationFindingSelection (\n    value: string,\n    option: any\n  ): void {\n    this.findingOptions.forEach(finding => {\n      if (finding.CodeValue === value) {\n        console.info(`selected finding \"${finding.CodeMeaning}\"`)\n        this.setState({\n          selectedFinding: finding,\n          selectedEvaluations: []\n        })\n      }\n    })\n  }\n\n  /**\n   * Handler that gets called when a geometry type has been selected for\n   * annotation.\n   *\n   * @param value - Code value of the coded finding that got selected\n   * @param option - Option that got selected\n   */\n  handleAnnotationGeometryTypeSelection (value: string, option: any): void {\n    this.setState({ selectedGeometryType: value })\n  }\n\n  /**\n   * Handler that gets called when measurements have been selected for\n   * annotation.\n   */\n  handleAnnotationMeasurementActivation (event: any): void {\n    const active: boolean = event.target.checked\n    if (active) {\n      this.setState({ selectedMarkup: 'measurement' })\n    } else {\n      this.setState({ selectedMarkup: undefined })\n    }\n  }\n\n  /**\n   * Handler that gets called when an evaluation has been selected for an\n   * annotation.\n   *\n   * @param value - Code value of the coded evaluation that got selected\n   * @param option - Option that got selected\n   */\n  handleAnnotationEvaluationSelection (\n    value: string,\n    option: any\n  ): void {\n    const selectedFinding = this.state.selectedFinding\n    if (selectedFinding !== undefined) {\n      const key = _buildKey(selectedFinding)\n      const name = option.label\n      this.evaluationOptions[key].forEach(evaluation => {\n        if (\n          evaluation.name.CodeValue === name.CodeValue &&\n          evaluation.name.CodingSchemeDesignator === name.CodingSchemeDesignator\n        ) {\n          evaluation.values.forEach(code => {\n            if (code.CodeValue === value) {\n              const filteredEvaluations = this.state.selectedEvaluations.filter(\n                (item: Evaluation) => item.name !== evaluation.name\n              )\n              this.setState({\n                selectedEvaluations: [\n                  ...filteredEvaluations,\n                  { name: name, value: code }\n                ]\n              })\n            }\n          })\n        }\n      })\n    }\n  }\n\n  /**\n   * Handler that gets called when an evaluation has been cleared for an\n   * annotation.\n   */\n  handleAnnotationEvaluationClearance (): void {\n    this.setState({\n      selectedEvaluations: []\n    })\n  }\n\n  handleXCoordinateSelection (value: any): void {\n    if (value != null) {\n      const x = Number(value)\n      const start = this.state.validXCoordinateRange[0]\n      const end = this.state.validXCoordinateRange[1]\n      if (x >= start && x <= end) {\n        this.setState({\n          selectedXCoordinate: x,\n          isSelectedXCoordinateValid: true\n        })\n        return\n      }\n    }\n    this.setState({\n      selectedXCoordinate: undefined,\n      isSelectedXCoordinateValid: false\n    })\n  }\n\n  handleYCoordinateSelection (value: any): void {\n    if (value != null) {\n      const y = Number(value)\n      const start = this.state.validYCoordinateRange[0]\n      const end = this.state.validYCoordinateRange[1]\n      if (y >= start && y <= end) {\n        this.setState({\n          selectedYCoordinate: y,\n          isSelectedYCoordinateValid: true\n        })\n        return\n      }\n    }\n    this.setState({\n      selectedYCoordinate: undefined,\n      isSelectedYCoordinateValid: false\n    })\n  }\n\n  handleMagnificationSelection (value: any): void {\n    if (value != null) {\n      if (value > 0 && value <= 40) {\n        this.setState({\n          selectedMagnification: Number(value),\n          isSelectedMagnificationValid: true\n        })\n        return\n      }\n    }\n    this.setState({\n      selectedMagnification: undefined,\n      isSelectedMagnificationValid: false\n    })\n  }\n\n  /**\n   * Handler that gets called when the selection of slide position was\n   * completed.\n   */\n  handleSlidePositionSelection (): void {\n    if (\n      this.state.isSelectedXCoordinateValid &&\n      this.state.isSelectedYCoordinateValid &&\n      this.state.isSelectedMagnificationValid &&\n      this.state.selectedXCoordinate != null &&\n      this.state.selectedYCoordinate != null &&\n      this.state.selectedMagnification != null\n    ) {\n      console.info(\n        'select slide position ' +\n        `(${this.state.selectedXCoordinate}, ` +\n        `${this.state.selectedYCoordinate}) ` +\n        `at ${this.state.selectedMagnification}x magnification`\n      )\n\n      const factor = this.state.selectedMagnification\n      /**\n       * On an optical microscope an objective with 1x magnification\n       * corresponds to approximately 10 micrometer pixel spacing\n       * (due to the ocular).\n       */\n      const targetPixelSpacing = 0.01 / factor\n      const diffs = []\n      for (let i = 0; i < this.volumeViewer.numLevels; i++) {\n        const actualPixelSpacing = this.volumeViewer.getPixelSpacing(i)[0]\n        diffs.push(Math.abs(targetPixelSpacing - actualPixelSpacing))\n      }\n      const level = diffs.indexOf(Math.min(...diffs))\n      this.volumeViewer.navigate({\n        position: [\n          this.state.selectedXCoordinate,\n          this.state.selectedYCoordinate\n        ],\n        level: level\n      })\n      const point = new dmv.scoord3d.Point({\n        coordinates: [\n          this.state.selectedXCoordinate,\n          this.state.selectedYCoordinate,\n          0\n        ],\n        frameOfReferenceUID: this.volumeViewer.frameOfReferenceUID\n      })\n      const roi = new dmv.roi.ROI({ scoord3d: point })\n      this.volumeViewer.addROI(roi, this.defaultRoiStyle)\n      this.setState(state => {\n        const visibleRoiUIDs = state.visibleRoiUIDs\n        visibleRoiUIDs.add(roi.uid)\n        return {\n          visibleRoiUIDs,\n          isGoToModalVisible: false\n        }\n      })\n    }\n  }\n\n  /**\n   * Handler that gets called when the selection of a slide position was\n   * canceled.\n   */\n  handleSlidePositionSelectionCancellation (): void {\n    console.log('cancel slide position selection')\n    this.setState({\n      isGoToModalVisible: false,\n      isSelectedXCoordinateValid: false,\n      isSelectedYCoordinateValid: false,\n      isSelectedMagnificationValid: false,\n      selectedXCoordinate: undefined,\n      selectedYCoordinate: undefined,\n      selectedMagnification: undefined\n    })\n  }\n\n  /**\n   * Handler that gets called when annotation configuration has been completed.\n   */\n  handleAnnotationConfigurationCompletion (): void {\n    console.debug('complete annotation configuration')\n    const finding = this.state.selectedFinding\n    const geometryType = this.state.selectedGeometryType\n    const markup = this.state.selectedMarkup\n    if (geometryType !== undefined && finding !== undefined) {\n      this.volumeViewer.activateDrawInteraction({ geometryType, markup })\n      this.setState({\n        isAnnotationModalVisible: false,\n        isRoiDrawingActive: true\n      })\n    } else {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.VISUALIZATION,\n          'Could not complete annotation configuration'\n        )\n      )\n    }\n  }\n\n  /**\n   * Handler that gets called when annotation configuration has been cancelled.\n   */\n  handleAnnotationConfigurationCancellation (): void {\n    console.debug('cancel annotation configuration')\n    this.setState({\n      isAnnotationModalVisible: false,\n      isRoiDrawingActive: false\n    })\n  }\n\n  /**\n   * Handler that gets called when a report should be generated for the current\n   * set of annotations.\n   */\n  handleReportGeneration (): void {\n    console.info('save ROIs')\n    const rois = this.volumeViewer.getAllROIs()\n    const opticalPaths = this.volumeViewer.getAllOpticalPaths()\n    const metadata = this.volumeViewer.getOpticalPathMetadata(\n      opticalPaths[0].identifier\n    )\n    // Metadata should be sorted such that the image with the highest\n    // resolution is the last item in the array.\n    const refImage = metadata[metadata.length - 1]\n    // We assume that there is only one specimen (tissue section) per\n    // ontainer (slide). Only the tissue section is tracked with a unique\n    // identifier, even if the section may be composed of different biological\n    // samples.\n    if (refImage.SpecimenDescriptionSequence.length > 1) {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.VISUALIZATION,\n          'More than one specimen has been described for the slide'\n        )\n      )\n    }\n    const refSpecimen = refImage.SpecimenDescriptionSequence[0]\n\n    console.debug('create Observation Context')\n    let observer\n    if (this.props.user !== undefined) {\n      observer = new dcmjs.sr.templates.PersonObserverIdentifyingAttributes({\n        name: this.props.user.name,\n        loginName: this.props.user.email\n      })\n    } else {\n      console.warn('no user information available')\n      observer = new dcmjs.sr.templates.PersonObserverIdentifyingAttributes({\n        name: 'ANONYMOUS'\n      })\n    }\n    const observationContext = new dcmjs.sr.templates.ObservationContext({\n      observerPersonContext: new dcmjs.sr.templates.ObserverContext({\n        observerType: new dcmjs.sr.coding.CodedConcept({\n          value: '121006',\n          schemeDesignator: 'DCM',\n          meaning: 'Person'\n        }),\n        observerIdentifyingAttributes: observer\n      }),\n      observerDeviceContext: new dcmjs.sr.templates.ObserverContext({\n        observerType: new dcmjs.sr.coding.CodedConcept({\n          value: '121007',\n          schemeDesignator: 'DCM',\n          meaning: 'Device'\n        }),\n        observerIdentifyingAttributes:\n          new dcmjs.sr.templates.DeviceObserverIdentifyingAttributes({\n            uid: this.props.app.uid,\n            manufacturerName: 'MGH Computational Pathology',\n            modelName: this.props.app.name\n          })\n      }),\n      subjectContext: new dcmjs.sr.templates.SubjectContext({\n        subjectClass: new dcmjs.sr.coding.CodedConcept({\n          value: '121027',\n          schemeDesignator: 'DCM',\n          meaning: 'Specimen'\n        }),\n        subjectClassSpecificContext:\n          new dcmjs.sr.templates.SubjectContextSpecimen({\n            uid: refSpecimen.SpecimenUID,\n            identifier: refSpecimen.SpecimenIdentifier,\n            containerIdentifier: refImage.ContainerIdentifier\n          })\n      })\n    })\n\n    console.debug('encode Imaging Measurements')\n    const imagingMeasurements: dcmjs.sr.valueTypes.ContainerContentItem[] = []\n    for (let i = 0; i < rois.length; i++) {\n      const roi = rois[i]\n      if (!this.state.visibleRoiUIDs.has(roi.uid)) {\n        continue\n      }\n      let findingType = roi.evaluations.find(\n        (item: dcmjs.sr.valueTypes.ContentItem) => {\n          return item.ConceptNameCodeSequence[0].CodeValue === '121071'\n        }\n      )\n      if (findingType === undefined) {\n        NotificationMiddleware.onError(\n          NotificationMiddlewareContext.SLIM,\n          new CustomError(\n            errorTypes.ENCODINGANDDECODING,\n            `No finding type was specified for ROI \"${roi.uid}\"`\n          )\n        )\n      }\n      findingType = findingType as dcmjs.sr.valueTypes.CodeContentItem\n      const group = new dcmjs.sr.templates.PlanarROIMeasurementsAndQualitativeEvaluations({\n        trackingIdentifier: new dcmjs.sr.templates.TrackingIdentifier({\n          uid: roi.properties.trackingUID ?? roi.uid,\n          identifier: `ROI #${i + 1}`\n        }),\n        referencedRegion: new dcmjs.sr.contentItems.ImageRegion3D({\n          graphicType: roi.scoord3d.graphicType,\n          graphicData: roi.scoord3d.graphicData,\n          frameOfReferenceUID: roi.scoord3d.frameOfReferenceUID\n        }),\n        findingType: new dcmjs.sr.coding.CodedConcept({\n          value: findingType.ConceptCodeSequence[0].CodeValue,\n          schemeDesignator:\n            findingType.ConceptCodeSequence[0].CodingSchemeDesignator,\n          meaning: findingType.ConceptCodeSequence[0].CodeMeaning\n        }),\n        qualitativeEvaluations: roi.evaluations.filter(\n          (item: dcmjs.sr.valueTypes.ContentItem) => {\n            return item.ConceptNameCodeSequence[0].CodeValue !== '121071'\n          }\n        ),\n        measurements: roi.measurements\n      })\n      const measurements = group as dcmjs.sr.valueTypes.ContainerContentItem[]\n      measurements[0].ContentTemplateSequence = [{\n        MappingResource: 'DCMR',\n        TemplateIdentifier: '1410'\n      }]\n      imagingMeasurements.push(...measurements)\n    }\n\n    console.debug('create Measurement Report document content')\n    const measurementReport = new dcmjs.sr.templates.MeasurementReport({\n      languageOfContentItemAndDescendants: new dcmjs.sr.templates.LanguageOfContentItemAndDescendants({}),\n      observationContext: observationContext,\n      procedureReported: new dcmjs.sr.coding.CodedConcept({\n        value: '112703',\n        schemeDesignator: 'DCM',\n        meaning: 'Whole Slide Imaging'\n      }),\n      imagingMeasurements: imagingMeasurements\n    })\n\n    console.info('create Comprehensive 3D SR document')\n    const dataset = new dcmjs.sr.documents.Comprehensive3DSR({\n      content: measurementReport[0],\n      evidence: [refImage],\n      seriesInstanceUID: dcmjs.data.DicomMetaDictionary.uid(),\n      seriesNumber: 1,\n      seriesDescription: 'Annotation',\n      sopInstanceUID: dcmjs.data.DicomMetaDictionary.uid(),\n      instanceNumber: 1,\n      manufacturer: 'MGH Computational Pathology',\n      previousVersions: undefined // TODO\n    })\n\n    this.setState({\n      isReportModalVisible: true,\n      generatedReport: dataset as dmv.metadata.Comprehensive3DSR\n    })\n  }\n\n  /**\n   * Handler that gets called when a report should be verified. The current\n   * list of annotations will be presented to the user together with other\n   * pertinent metadata about the patient, study, and specimen.\n   */\n  handleReportVerification (): void {\n    console.info('verfied report')\n\n    const report = this.state.generatedReport\n    if (report !== undefined) {\n      const dataset = report as unknown as dmv.metadata.Comprehensive3DSR\n      console.debug('create File Meta Information')\n      const fileMetaInformationVersionArray = new Uint8Array(2)\n      fileMetaInformationVersionArray[1] = 1\n      const fileMeta = {\n        // FileMetaInformationVersion\n        '00020001': {\n          Value: [fileMetaInformationVersionArray.buffer],\n          vr: 'OB'\n        },\n        // MediaStorageSOPClassUID\n        '00020002': {\n          Value: [dataset.SOPClassUID],\n          vr: 'UI'\n        },\n        // MediaStorageSOPInstanceUID\n        '00020003': {\n          Value: [dataset.SOPInstanceUID],\n          vr: 'UI'\n        },\n        // TransferSyntaxUID\n        '00020010': {\n          Value: ['1.2.840.10008.1.2.1'],\n          vr: 'UI'\n        },\n        // ImplementationClassUID\n        '00020012': {\n          Value: [this.props.app.uid],\n          vr: 'UI'\n        }\n      }\n\n      console.info('store Comprehensive 3D SR document')\n      const writer = new dcmjs.data.DicomDict(fileMeta)\n      writer.dict = dcmjs.data.DicomMetaDictionary.denaturalizeDataset(dataset)\n      const buffer = writer.write()\n      const client = this.props.clients[StorageClasses.COMPREHENSIVE_3D_SR]\n      client.storeInstances({ datasets: [buffer] }).then(\n        (response: any) => message.info('Annotations were saved.')\n      ).catch((error) => {\n        console.error(error)\n        // eslint-disable-next-line @typescript-eslint/no-floating-promises\n        NotificationMiddleware.onError(\n          NotificationMiddlewareContext.SLIM,\n          new CustomError(\n            errorTypes.ENCODINGANDDECODING,\n            'Annotations could not be saved'\n          )\n        )\n      })\n    }\n    this.setState({\n      isReportModalVisible: false,\n      generatedReport: undefined\n    })\n  }\n\n  /**\n   * Handler that gets called when report generation has been cancelled.\n   */\n  handleReportCancellation (): void {\n    this.setState({\n      isReportModalVisible: false,\n      generatedReport: undefined\n    })\n  }\n\n  /**\n   * Handler that gets called when an annotation has been selected from the\n   * current list of annotations.\n   */\n  handleAnnotationSelection ({ roiUID }: { roiUID: string }): void {\n    console.log(`selected ROI ${roiUID}`)\n    this.setState({ selectedRoiUIDs: new Set([roiUID]) })\n    this.volumeViewer.getAllROIs().forEach((roi) => {\n      let style = {}\n      if (roi.uid === roiUID) {\n        style = this.selectedRoiStyle\n        this.setState(state => {\n          const visibleRoiUIDs = state.visibleRoiUIDs\n          visibleRoiUIDs.add(roi.uid)\n          return { visibleRoiUIDs }\n        })\n      } else {\n        if (this.state.visibleRoiUIDs.has(roi.uid)) {\n          const key = _getRoiKey(roi)\n          style = this.getRoiStyle(key)\n        }\n      }\n      this.volumeViewer.setROIStyle(roi.uid, style)\n    })\n  }\n\n  /**\n   * Handle toggling of annotation visibility, i.e., whether a given\n   * annotation should be either displayed or hidden by the viewer.\n   */\n  handleAnnotationVisibilityChange ({ roiUID, isVisible }: {\n    roiUID: string\n    isVisible: boolean\n  }): void {\n    if (isVisible) {\n      console.info(`show ROI ${roiUID}`)\n      const roi = this.volumeViewer.getROI(roiUID)\n      const key = _getRoiKey(roi)\n      const style = this.getRoiStyle(key)\n      this.volumeViewer.setROIStyle(roi.uid, style)\n      this.setState(state => {\n        const visibleRoiUIDs = state.visibleRoiUIDs\n        visibleRoiUIDs.add(roi.uid)\n        return { visibleRoiUIDs }\n      })\n    } else {\n      console.info(`hide ROI ${roiUID}`)\n      this.setState(state => {\n        const selectedRoiUIDs = state.selectedRoiUIDs\n        selectedRoiUIDs.delete(roiUID)\n        const visibleRoiUIDs = state.visibleRoiUIDs\n        visibleRoiUIDs.delete(roiUID)\n        return { visibleRoiUIDs, selectedRoiUIDs }\n      })\n      this.volumeViewer.setROIStyle(roiUID, {})\n    }\n  }\n\n  /**\n   * Handle toggling of annotation group visibility, i.e., whether a given\n   * annotation group should be either displayed or hidden by the viewer.\n   */\n  handleAnnotationGroupVisibilityChange ({ annotationGroupUID, isVisible }: {\n    annotationGroupUID: string\n    isVisible: boolean\n  }): void {\n    console.log(`change visibility of annotation group ${annotationGroupUID}`)\n    if (isVisible) {\n      console.info(`show annotation group ${annotationGroupUID}`)\n      try {\n        this.volumeViewer.showAnnotationGroup(annotationGroupUID)\n      } catch (error) {\n        // eslint-disable-next-line @typescript-eslint/no-floating-promises\n        NotificationMiddleware.onError(\n          NotificationMiddlewareContext.SLIM,\n          new CustomError(\n            errorTypes.VISUALIZATION,\n            'Failed to show annotation group.'\n          )\n        )\n        throw error\n      }\n      this.setState(state => {\n        const visibleAnnotationGroupUIDs = new Set(\n          state.visibleAnnotationGroupUIDs\n        )\n        visibleAnnotationGroupUIDs.add(annotationGroupUID)\n        return { visibleAnnotationGroupUIDs }\n      })\n    } else {\n      console.info(`hide annotation group ${annotationGroupUID}`)\n      this.volumeViewer.hideAnnotationGroup(annotationGroupUID)\n      this.setState(state => {\n        const visibleAnnotationGroupUIDs = new Set(\n          state.visibleAnnotationGroupUIDs\n        )\n        visibleAnnotationGroupUIDs.delete(annotationGroupUID)\n        return { visibleAnnotationGroupUIDs }\n      })\n    }\n  }\n\n  /**\n   * Handle change of annotation group style.\n   */\n  handleAnnotationGroupStyleChange ({ uid, styleOptions }: {\n    uid: string\n    styleOptions: {\n      opacity?: number\n      color?: number[]\n      measurement?: dcmjs.sr.coding.CodedConcept\n    }\n  }): void {\n    console.log(`change style of annotation group ${uid}`)\n    try {\n      this.volumeViewer.setAnnotationGroupStyle(\n        uid,\n        styleOptions\n      )\n    } catch (error) {\n      // eslint-disable-next-line @typescript-eslint/no-floating-promises\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.VISUALIZATION,\n          'Failed to change style of annotation group.'\n        )\n      )\n      throw error\n    }\n  }\n\n  generateRoiStyle (\n    styleOptions: {\n      opacity?: number\n      color?: number[]\n    }): dmv.viewer.ROIStyleOptions {\n    const opacity = styleOptions.opacity ?? DEFAULT_ANNOTATION_OPACITY\n    const strokeColor = styleOptions.color ?? DEFAULT_ANNOTATION_STROKE_COLOR\n    const fillColor = strokeColor.map((c) => Math.min(c + 25, 255))\n    const style = _formatRoiStyle({\n      fill: { color: [...fillColor, opacity] },\n      stroke: { color: [...strokeColor, opacity] },\n      radius: this.defaultRoiStyle.stroke?.width\n    })\n    return style\n  }\n\n  handleRoiStyleChange ({ uid, styleOptions }: {\n    uid: string\n    styleOptions: {\n      opacity: number\n      color: number[]\n    }\n  }): void {\n    console.log(`change style of ROI ${uid}`)\n    try {\n      this.defaultAnnotationStyles[uid] = styleOptions\n      const style = this.generateRoiStyle(styleOptions)\n\n      const roi = this.volumeViewer.getROI(uid)\n      const key = _getRoiKey(roi) as string\n      this.roiStyles[key] = style\n      this.volumeViewer.setROIStyle(uid, style)\n      this.state.visibleRoiUIDs.add(uid)\n    } catch (error) {\n      // eslint-disable-next-line @typescript-eslint/no-floating-promises\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.VISUALIZATION,\n          'Failed to change style of ROI.'\n        )\n      )\n      throw error\n    }\n  }\n\n  /**\n   * Handle toggling of segment visibility, i.e., whether a given\n   * segment should be either displayed or hidden by the viewer.\n   */\n  handleSegmentVisibilityChange ({ segmentUID, isVisible }: {\n    segmentUID: string\n    isVisible: boolean\n  }): void {\n    console.log(`change visibility of segment ${segmentUID}`)\n    if (isVisible) {\n      console.info(`show segment ${segmentUID}`)\n      this.volumeViewer.showSegment(segmentUID)\n      this.setState(state => {\n        const visibleSegmentUIDs = new Set(state.visibleSegmentUIDs)\n        visibleSegmentUIDs.add(segmentUID)\n        return { visibleSegmentUIDs }\n      })\n    } else {\n      console.info(`hide segment ${segmentUID}`)\n      this.volumeViewer.hideSegment(segmentUID)\n      this.setState(state => {\n        const visibleSegmentUIDs = new Set(state.visibleSegmentUIDs)\n        visibleSegmentUIDs.delete(segmentUID)\n        return { visibleSegmentUIDs }\n      })\n    }\n  }\n\n  /**\n   * Handle change of segment style.\n   */\n  handleSegmentStyleChange ({ segmentUID, styleOptions }: {\n    segmentUID: string\n    styleOptions: {\n      opacity?: number\n    }\n  }): void {\n    console.log(`change style of segment ${segmentUID}`)\n    this.volumeViewer.setSegmentStyle(segmentUID, styleOptions)\n  }\n\n  /**\n   * Handle toggling of mapping visibility, i.e., whether a given\n   * mapping should be either displayed or hidden by the viewer.\n   */\n  handleMappingVisibilityChange ({ mappingUID, isVisible }: {\n    mappingUID: string\n    isVisible: boolean\n  }): void {\n    console.log(`change visibility of mapping ${mappingUID}`)\n    if (isVisible) {\n      console.info(`show mapping ${mappingUID}`)\n      this.volumeViewer.showParameterMapping(mappingUID)\n      this.setState(state => {\n        const visibleMappingUIDs = new Set(state.visibleMappingUIDs)\n        visibleMappingUIDs.add(mappingUID)\n        return { visibleMappingUIDs }\n      })\n    } else {\n      console.info(`hide mapping ${mappingUID}`)\n      this.volumeViewer.hideParameterMapping(mappingUID)\n      this.setState(state => {\n        const visibleMappingUIDs = new Set(state.visibleMappingUIDs)\n        visibleMappingUIDs.delete(mappingUID)\n        return { visibleMappingUIDs }\n      })\n    }\n  }\n\n  /**\n   * Handle change of mapping style.\n   */\n  handleMappingStyleChange ({ mappingUID, styleOptions }: {\n    mappingUID: string\n    styleOptions: {\n      opacity?: number\n    }\n  }): void {\n    console.log(`change style of mapping ${mappingUID}`)\n    this.volumeViewer.setParameterMappingStyle(mappingUID, styleOptions)\n  }\n\n  /**\n   * Handle toggling of optical path visibility, i.e., whether a given\n   * optical path should be either displayed or hidden by the viewer.\n   */\n  handleOpticalPathVisibilityChange ({ opticalPathIdentifier, isVisible }: {\n    opticalPathIdentifier: string\n    isVisible: boolean\n  }): void {\n    console.log(`change visibility of optical path ${opticalPathIdentifier}`)\n    if (isVisible) {\n      console.info(`show optical path ${opticalPathIdentifier}`)\n      this.volumeViewer.showOpticalPath(opticalPathIdentifier)\n      this.setState(state => {\n        const visibleOpticalPathIdentifiers = new Set(\n          state.visibleOpticalPathIdentifiers\n        )\n        visibleOpticalPathIdentifiers.add(opticalPathIdentifier)\n        return { visibleOpticalPathIdentifiers }\n      })\n    } else {\n      console.info(`hide optical path ${opticalPathIdentifier}`)\n      this.volumeViewer.hideOpticalPath(opticalPathIdentifier)\n      this.setState(state => {\n        const visibleOpticalPathIdentifiers = new Set(\n          state.visibleOpticalPathIdentifiers\n        )\n        visibleOpticalPathIdentifiers.delete(opticalPathIdentifier)\n        return { visibleOpticalPathIdentifiers }\n      })\n    }\n  }\n\n  /**\n   * Handle change of optical path style.\n   */\n  handleOpticalPathStyleChange ({ opticalPathIdentifier, styleOptions }: {\n    opticalPathIdentifier: string\n    styleOptions: {\n      opacity?: number\n      color?: number[]\n      limitValues?: number[]\n    }\n  }): void {\n    console.log(`change style of optical path ${opticalPathIdentifier}`)\n    this.volumeViewer.setOpticalPathStyle(opticalPathIdentifier, styleOptions)\n  }\n\n  /**\n   * Handle toggling of optical path activity, i.e., whether a given\n   * optical path should be either added or removed from the viewport.\n   */\n  handleOpticalPathActivityChange ({ opticalPathIdentifier, isActive }: {\n    opticalPathIdentifier: string\n    isActive: boolean\n  }): void {\n    console.log(`change activity of optical path ${opticalPathIdentifier}`)\n    if (isActive) {\n      console.info(`activate optical path ${opticalPathIdentifier}`)\n      this.volumeViewer.activateOpticalPath(opticalPathIdentifier)\n      this.setState(state => {\n        const activeOpticalPathIdentifiers = new Set(\n          state.activeOpticalPathIdentifiers\n        )\n        activeOpticalPathIdentifiers.add(opticalPathIdentifier)\n        return { activeOpticalPathIdentifiers }\n      })\n    } else {\n      console.info(`deactivate optical path ${opticalPathIdentifier}`)\n      this.volumeViewer.deactivateOpticalPath(opticalPathIdentifier)\n      this.setState(state => {\n        const activeOpticalPathIdentifiers = new Set(\n          state.activeOpticalPathIdentifiers\n        )\n        activeOpticalPathIdentifiers.delete(opticalPathIdentifier)\n        return { activeOpticalPathIdentifiers }\n      })\n    }\n  }\n\n  /**\n   * Set default presentation state that is either defined by metadata included\n   * in the DICOM Slide Microscopy instance or by the viewer.\n   */\n  setDefaultPresentationState (): void {\n    const visibleOpticalPathIdentifiers: Set<string> = new Set()\n    const opticalPaths = this.volumeViewer.getAllOpticalPaths()\n    opticalPaths.sort((a, b) => {\n      if (a.identifier.localeCompare(b.identifier) === 1) {\n        return 1\n      } else if (b.identifier.localeCompare(a.identifier) === 1) {\n        return -1\n      }\n      return 0\n    })\n    opticalPaths.forEach((item: dmv.opticalPath.OpticalPath) => {\n      const identifier = item.identifier\n      const style = this.volumeViewer.getOpticalPathDefaultStyle(identifier)\n      this.volumeViewer.setOpticalPathStyle(identifier, style)\n      this.volumeViewer.hideOpticalPath(identifier)\n      this.volumeViewer.deactivateOpticalPath(identifier)\n      if (item.isMonochromatic) {\n        /*\n         * If the image metadata contains a palette color lookup table for the\n         * optical path, then it will be displayed by default.\n         */\n        if (item.paletteColorLookupTableUID != null) {\n          visibleOpticalPathIdentifiers.add(identifier)\n        }\n      } else {\n        /* Color images will always be displayed by default. */\n        visibleOpticalPathIdentifiers.add(identifier)\n      }\n    })\n\n    /*\n     * If no optical paths have been selected for visualization so far, select\n     * first n optical paths and set a default value of interest (VOI) window\n     * (using pre-computed pixel data statistics) and a default color.\n     */\n    if (visibleOpticalPathIdentifiers.size === 0) {\n      const defaultColors = [\n        [255, 255, 255]\n      ]\n      opticalPaths.forEach((item: dmv.opticalPath.OpticalPath) => {\n        const identifier = item.identifier\n        if (item.isMonochromatic) {\n          const numVisible = visibleOpticalPathIdentifiers.size\n          if (numVisible < defaultColors.length) {\n            const style = {\n              ...this.volumeViewer.getOpticalPathStyle(identifier)\n            }\n            const index = numVisible\n            style.color = defaultColors[index]\n            const stats = this.state.pixelDataStatistics[item.identifier]\n            if (stats != null) {\n              style.limitValues = [stats.min, stats.max]\n            }\n            this.volumeViewer.setOpticalPathStyle(item.identifier, style)\n            visibleOpticalPathIdentifiers.add(item.identifier)\n          }\n        }\n      })\n    }\n\n    console.info(\n      `selected n=${visibleOpticalPathIdentifiers.size} optical paths ` +\n      'for visualization'\n    )\n    visibleOpticalPathIdentifiers.forEach(identifier => {\n      this.volumeViewer.showOpticalPath(identifier)\n    })\n    this.setState(state => ({\n      activeOpticalPathIdentifiers: new Set(visibleOpticalPathIdentifiers),\n      visibleOpticalPathIdentifiers: new Set(visibleOpticalPathIdentifiers)\n    }))\n  }\n\n  /**\n   * Handler that gets called when a presentation state has been selected from\n   * the current list of available presentation states.\n   */\n  handlePresentationStateReset (): void {\n    this.setState({ selectedPresentationStateUID: undefined })\n    const urlPath = this.props.location.pathname\n    this.props.navigate(urlPath)\n    this.setDefaultPresentationState()\n  }\n\n  /**\n   * Handler that gets called when a presentation state has been selected from\n   * the current list of available presentation states.\n   */\n  handlePresentationStateSelection (\n    value?: string,\n    option?: any\n  ): void {\n    if (value != null) {\n      console.info(`select Presentation State instance \"${value}\"`)\n      let presentationState\n      this.state.presentationStates.forEach(instance => {\n        if (instance.SOPInstanceUID === value) {\n          presentationState = instance\n        }\n      })\n      if (presentationState != null) {\n        let urlPath = this.props.location.pathname\n        urlPath += `?state=${value}`\n        this.props.navigate(urlPath)\n        this.setPresentationState(presentationState)\n      } else {\n        // eslint-disable-next-line @typescript-eslint/no-floating-promises\n        NotificationMiddleware.onError(\n          NotificationMiddlewareContext.SLIM,\n          new CustomError(\n            errorTypes.VISUALIZATION,\n            'Presentation State could not be found'\n          )\n        )\n        console.log(\n          'failed to handle section of presentation state: ' +\n          `could not find instance \"${value}\"`\n        )\n      }\n    } else {\n      this.handlePresentationStateReset()\n    }\n    this.setState({ selectedPresentationStateUID: value })\n  }\n\n  /**\n   * Handler that will toggle the ROI drawing tool, i.e., either activate or\n   * de-activate it, depending on its current state.\n   */\n  handleRoiDrawing (): void {\n    if (this.state.isRoiDrawingActive) {\n      console.info('deactivate drawing of ROIs')\n      this.volumeViewer.deactivateDrawInteraction()\n      this.volumeViewer.activateSelectInteraction({})\n      this.setState({\n        isAnnotationModalVisible: false,\n        isSelectedRoiModalVisible: false,\n        isRoiTranslationActive: false,\n        isRoiDrawingActive: false,\n        isRoiModificationActive: false,\n        isGoToModalVisible: false\n      })\n    } else {\n      console.info('activate drawing of ROIs')\n      this.setState({\n        isAnnotationModalVisible: true,\n        isSelectedRoiModalVisible: false,\n        isRoiDrawingActive: true,\n        isRoiModificationActive: false,\n        isRoiTranslationActive: false,\n        isGoToModalVisible: false\n      })\n      this.volumeViewer.deactivateSelectInteraction()\n      this.volumeViewer.deactivateSnapInteraction()\n      this.volumeViewer.deactivateTranslateInteraction()\n      this.volumeViewer.deactivateModifyInteraction()\n    }\n  }\n\n  /**\n   * Handler that will toggle the ROI modification tool, i.e., either activate\n   * or de-activate it, depending on its current state.\n   */\n  handleRoiModification (): void {\n    console.info('toggle modification of ROIs')\n    if (this.volumeViewer.isModifyInteractionActive) {\n      this.volumeViewer.deactivateModifyInteraction()\n      this.volumeViewer.deactivateSnapInteraction()\n      this.volumeViewer.activateSelectInteraction({})\n      this.setState({\n        isRoiTranslationActive: false,\n        isRoiDrawingActive: false,\n        isRoiModificationActive: false\n      })\n    } else {\n      this.setState({\n        isRoiModificationActive: true,\n        isRoiDrawingActive: false,\n        isRoiTranslationActive: false\n      })\n      this.volumeViewer.deactivateDrawInteraction()\n      this.volumeViewer.deactivateTranslateInteraction()\n      this.volumeViewer.deactivateSelectInteraction()\n      this.volumeViewer.activateSnapInteraction({})\n      this.volumeViewer.activateModifyInteraction({})\n    }\n  }\n\n  /**\n   * Handler that will toggle the ROI translation tool, i.e., either activate\n   * or de-activate it, depending on its current state.\n   */\n  handleRoiTranslation (): void {\n    console.info('toggle translation of ROIs')\n    if (this.volumeViewer.isTranslateInteractionActive) {\n      this.volumeViewer.deactivateTranslateInteraction()\n      this.setState({\n        isRoiTranslationActive: false,\n        isRoiDrawingActive: false,\n        isRoiModificationActive: false\n      })\n    } else {\n      this.setState({\n        isRoiTranslationActive: true,\n        isRoiDrawingActive: false,\n        isRoiModificationActive: false\n      })\n      this.volumeViewer.deactivateModifyInteraction()\n      this.volumeViewer.deactivateSnapInteraction()\n      this.volumeViewer.deactivateDrawInteraction()\n      this.volumeViewer.deactivateSelectInteraction()\n      this.volumeViewer.activateTranslateInteraction({})\n    }\n  }\n\n  handleGoTo (): void {\n    this.volumeViewer.deactivateDrawInteraction()\n    this.volumeViewer.deactivateModifyInteraction()\n    this.volumeViewer.deactivateSnapInteraction()\n    this.volumeViewer.deactivateTranslateInteraction()\n    this.volumeViewer.deactivateSelectInteraction()\n    this.setState({\n      isGoToModalVisible: true,\n      isAnnotationModalVisible: false,\n      isSelectedRoiModalVisible: false,\n      isReportModalVisible: false,\n      isRoiTranslationActive: false,\n      isRoiModificationActive: false,\n      isRoiDrawingActive: false\n    })\n  }\n\n  /**\n   * Handler that will toggle the ROI removal tool, i.e., either activate\n   * or de-activate it, depending on its current state.\n   */\n  handleRoiRemoval (): void {\n    this.volumeViewer.deactivateDrawInteraction()\n    this.volumeViewer.deactivateSnapInteraction()\n    this.volumeViewer.deactivateTranslateInteraction()\n    this.volumeViewer.deactivateModifyInteraction()\n    if (this.state.selectedRoiUIDs.size > 0) {\n      this.state.selectedRoiUIDs.forEach(uid => {\n        if (uid === undefined) {\n          // eslint-disable-next-line @typescript-eslint/no-floating-promises\n          message.warning('No annotation was selected for removal')\n          return\n        }\n        console.info(`remove ROI \"${uid}\"`)\n        this.volumeViewer.removeROI(uid)\n        // eslint-disable-next-line @typescript-eslint/no-floating-promises\n        message.info('Annotation was removed')\n      })\n      this.setState({\n        selectedRoiUIDs: new Set(),\n        isRoiTranslationActive: false,\n        isRoiDrawingActive: false,\n        isRoiModificationActive: false\n      })\n    } else {\n      this.state.visibleRoiUIDs.forEach(uid => {\n        console.info(`remove ROI \"${uid}\"`)\n        this.volumeViewer.removeROI(uid)\n      })\n      this.setState({\n        visibleRoiUIDs: new Set(),\n        isRoiTranslationActive: false,\n        isRoiDrawingActive: false,\n        isRoiModificationActive: false\n      })\n    }\n    this.volumeViewer.activateSelectInteraction({})\n  }\n\n  /**\n   * Handler that will toggle the ROI visibility tool, i.e., either activate\n   * or de-activate it, depending on its current state.\n   */\n  handleRoiVisibilityChange (): void {\n    console.info('toggle visibility of ROIs')\n    if (this.volumeViewer.areROIsVisible) {\n      this.volumeViewer.deactivateDrawInteraction()\n      this.volumeViewer.deactivateSnapInteraction()\n      this.volumeViewer.deactivateTranslateInteraction()\n      this.volumeViewer.deactivateSelectInteraction()\n      this.volumeViewer.deactivateModifyInteraction()\n      this.volumeViewer.hideROIs()\n      this.setState({\n        areRoisHidden: true,\n        isRoiDrawingActive: false,\n        isRoiModificationActive: false,\n        isRoiTranslationActive: false\n      })\n    } else {\n      this.volumeViewer.showROIs()\n      this.volumeViewer.activateSelectInteraction({})\n      this.state.selectedRoiUIDs.forEach(uid => {\n        if (uid !== undefined) {\n          this.volumeViewer.setROIStyle(uid, this.selectedRoiStyle)\n        }\n      })\n      this.setState({ areRoisHidden: false })\n    }\n  }\n\n  render (): React.ReactNode {\n    const rois: dmv.roi.ROI[] = []\n    const segments: dmv.segment.Segment[] = []\n    const mappings: dmv.mapping.ParameterMapping[] = []\n    const annotationGroups: dmv.annotation.AnnotationGroup[] = []\n    rois.push(...this.volumeViewer.getAllROIs())\n    segments.push(...this.volumeViewer.getAllSegments())\n    mappings.push(...this.volumeViewer.getAllParameterMappings())\n    const allAnnotationGroups = this.volumeViewer.getAllAnnotationGroups()\n    const filteredAnnotationGroups = allAnnotationGroups?.filter((annotationGroup) =>\n      annotationGroup.referencedSeriesInstanceUID === this.props.seriesInstanceUID\n    )\n    annotationGroups.push(...filteredAnnotationGroups)\n\n    const annotations = rois.map(roi => adaptRoiToAnnotation(roi))\n\n    const openSubMenuItems = [\n      'specimens', 'optical-paths', 'annotations', 'presentation-states'\n    ]\n\n    let report: React.ReactNode\n    const dataset = this.state.generatedReport\n    if (dataset !== undefined) {\n      report = <Report dataset={dataset} />\n    }\n\n    let annotationMenuItems: React.ReactNode\n    if (rois.length > 0) {\n      annotationMenuItems = (\n        <AnnotationList\n          rois={rois}\n          selectedRoiUIDs={this.state.selectedRoiUIDs}\n          visibleRoiUIDs={this.state.visibleRoiUIDs}\n          onSelection={this.handleAnnotationSelection}\n          onVisibilityChange={this.handleAnnotationVisibilityChange}\n        />\n      )\n    }\n\n    const findingOptions = this.findingOptions.map(finding => {\n      return (\n        <Select.Option\n          key={finding.CodeValue}\n          value={finding.CodeValue}\n        >\n          {finding.CodeMeaning}\n        </Select.Option>\n      )\n    })\n\n    const geometryTypeOptionsMapping: { [key: string]: React.ReactNode } = {\n      point: <Select.Option key='point' value='point'>Point</Select.Option>,\n      circle: <Select.Option key='circle' value='circle'>Circle</Select.Option>,\n      box: <Select.Option key='box' value='box'>Box</Select.Option>,\n      polygon: <Select.Option key='polygon' value='polygon'>Polygon</Select.Option>,\n      line: <Select.Option key='line' value='line'>Line</Select.Option>,\n      freehandpolygon: (\n        <Select.Option key='freehandpolygon' value='freehandpolygon'>\n          Polygon (freehand)\n        </Select.Option>\n      ),\n      freehandline: (\n        <Select.Option key='freehandline' value='freehandline'>\n          Line (freehand)\n        </Select.Option>\n      )\n    }\n\n    const annotationConfigurations: React.ReactNode[] = [\n      (\n        <Select\n          style={{ minWidth: 130 }}\n          onSelect={this.handleAnnotationFindingSelection}\n          key='annotation-finding'\n          defaultActiveFirstOption\n        >\n          {findingOptions}\n        </Select>\n      )\n    ]\n\n    const selectedFinding = this.state.selectedFinding\n    if (selectedFinding !== undefined) {\n      const key = _buildKey(selectedFinding)\n      this.evaluationOptions[key].forEach(evaluation => {\n        const evaluationOptions = evaluation.values.map(code => {\n          return (\n            <Select.Option\n              key={code.CodeValue}\n              value={code.CodeValue}\n              label={evaluation.name}\n            >\n              {code.CodeMeaning}\n            </Select.Option>\n          )\n        })\n        annotationConfigurations.push(\n          <>\n            {evaluation.name.CodeMeaning}\n            <Select\n              style={{ minWidth: 130 }}\n              onSelect={this.handleAnnotationEvaluationSelection}\n              allowClear\n              onClear={this.handleAnnotationEvaluationClearance}\n              defaultActiveFirstOption={false}\n            >\n              {evaluationOptions}\n            </Select>\n          </>\n        )\n      })\n      const geometryTypeOptions = this.geometryTypeOptions[key].map(name => {\n        return geometryTypeOptionsMapping[name]\n      })\n      annotationConfigurations.push(\n        <>\n          ROI geometry type\n          <Select\n            style={{ minWidth: 130 }}\n            onSelect={this.handleAnnotationGeometryTypeSelection}\n            key='annotation-geometry-type'\n          >\n            {geometryTypeOptions}\n          </Select>\n        </>\n      )\n      annotationConfigurations.push(\n        <Checkbox\n          onChange={this.handleAnnotationMeasurementActivation}\n          key='annotation-measurement'\n        >\n          measure\n        </Checkbox>\n      )\n    }\n\n    const specimenMenu = (\n      <Menu.SubMenu key='specimens' title='Specimens'>\n        <SpecimenList\n          metadata={this.props.slide.volumeImages[0]}\n          showstain={false}\n        />\n      </Menu.SubMenu>\n    )\n\n    const equipmentMenu = (\n      <Menu.SubMenu key='equipment' title='Equipment'>\n        <Equipment metadata={this.props.slide.volumeImages[0]} />\n      </Menu.SubMenu>\n    )\n\n    const opticalPaths = this.volumeViewer.getAllOpticalPaths()\n    opticalPaths.sort((a, b) => {\n      if (a.identifier.localeCompare(b.identifier) === 1) {\n        return 1\n      } else if (b.identifier.localeCompare(a.identifier) === 1) {\n        return -1\n      }\n      return 0\n    })\n    const opticalPathStyles: {\n      [identifier: string]: {\n        opacity: number\n        color?: number[]\n        limitValues?: number[]\n        paletteColorLookupTable?: dmv.color.PaletteColorLookupTable\n      }\n    } = {}\n    const opticalPathMetadata: {\n      [identifier: string]: dmv.metadata.VLWholeSlideMicroscopyImage[]\n    } = {}\n    opticalPaths.forEach(opticalPath => {\n      const identifier = opticalPath.identifier\n      const metadata = this.volumeViewer.getOpticalPathMetadata(identifier)\n      opticalPathMetadata[identifier] = metadata\n      const style = {\n        ...this.volumeViewer.getOpticalPathStyle(identifier)\n      }\n      opticalPathStyles[identifier] = style\n    })\n    const opticalPathMenu = (\n      <Menu.SubMenu key='optical-paths' title='Optical Paths'>\n        <OpticalPathList\n          metadata={opticalPathMetadata}\n          opticalPaths={opticalPaths}\n          defaultOpticalPathStyles={opticalPathStyles}\n          visibleOpticalPathIdentifiers={this.state.visibleOpticalPathIdentifiers}\n          activeOpticalPathIdentifiers={this.state.activeOpticalPathIdentifiers}\n          onOpticalPathVisibilityChange={this.handleOpticalPathVisibilityChange}\n          onOpticalPathStyleChange={this.handleOpticalPathStyleChange}\n          onOpticalPathActivityChange={this.handleOpticalPathActivityChange}\n          selectedPresentationStateUID={this.state.selectedPresentationStateUID}\n        />\n      </Menu.SubMenu>\n    )\n\n    let presentationStateMenu\n    if (this.state.presentationStates.length > 0) {\n      const presentationStateOptions = []\n      this.state.presentationStates.forEach(instance => {\n        presentationStateOptions.push(\n          <Select.Option\n            key={instance.SOPInstanceUID}\n            value={instance.SOPInstanceUID}\n            dropdownMatchSelectWidth={false}\n            size='small'\n          >\n            {instance.ContentDescription}\n          </Select.Option>\n        )\n      })\n      presentationStateOptions.push(\n        <Select.Option\n          key='default-presentation-state'\n          value={undefined}\n          dropdownMatchSelectWidth={false}\n          size='small'\n        >\n          <></>\n        </Select.Option>\n      )\n      presentationStateMenu = (\n        <Menu.SubMenu key='presentation-states' title='Presentation States'>\n          <Space align='center' size={20} style={{ padding: '14px' }}>\n            <Select\n              style={{ minWidth: 200, maxWidth: 200 }}\n              onSelect={this.handlePresentationStateSelection}\n              key='presentation-states'\n              value={this.state.selectedPresentationStateUID}\n            >\n              {presentationStateOptions}\n            </Select>\n            <Tooltip title='Reset'>\n              <Btn\n                icon={<UndoOutlined />}\n                type='primary'\n                onClick={this.handlePresentationStateReset}\n              />\n            </Tooltip>\n          </Space>\n        </Menu.SubMenu>\n      )\n    }\n\n    let segmentationMenu\n    if (segments.length > 0) {\n      const defaultSegmentStyles: {\n        [segmentUID: string]: {\n          opacity: number\n        }\n      } = {}\n      const segmentMetadata: {\n        [segmentUID: string]: dmv.metadata.Segmentation[]\n      } = {}\n      const segments = this.volumeViewer.getAllSegments()\n      segments.forEach(segment => {\n        defaultSegmentStyles[segment.uid] = this.volumeViewer.getSegmentStyle(\n          segment.uid\n        )\n        segmentMetadata[segment.uid] = this.volumeViewer.getSegmentMetadata(\n          segment.uid\n        )\n      })\n      segmentationMenu = (\n        <Menu.SubMenu key='segmentations' title='Segmentations'>\n          <SegmentList\n            segments={segments}\n            metadata={segmentMetadata}\n            defaultSegmentStyles={defaultSegmentStyles}\n            visibleSegmentUIDs={this.state.visibleSegmentUIDs}\n            onSegmentVisibilityChange={this.handleSegmentVisibilityChange}\n            onSegmentStyleChange={this.handleSegmentStyleChange}\n          />\n        </Menu.SubMenu>\n      )\n      openSubMenuItems.push('segmentations')\n    }\n\n    let parametricMapMenu\n    if (mappings.length > 0) {\n      const defaultMappingStyles: {\n        [mappingUID: string]: {\n          opacity: number\n        }\n      } = {}\n      const mappingMetadata: {\n        [mappingUID: string]: dmv.metadata.ParametricMap[]\n      } = {}\n      mappings.forEach(mapping => {\n        defaultMappingStyles[mapping.uid] = this.volumeViewer.getParameterMappingStyle(\n          mapping.uid\n        )\n        mappingMetadata[mapping.uid] = this.volumeViewer.getParameterMappingMetadata(\n          mapping.uid\n        )\n      })\n      parametricMapMenu = (\n        <Menu.SubMenu key='parmetric-maps' title='Parametric Maps'>\n          <MappingList\n            mappings={mappings}\n            metadata={mappingMetadata}\n            defaultMappingStyles={defaultMappingStyles}\n            visibleMappingUIDs={this.state.visibleMappingUIDs}\n            onMappingVisibilityChange={this.handleMappingVisibilityChange}\n            onMappingStyleChange={this.handleMappingStyleChange}\n          />\n        </Menu.SubMenu>\n      )\n      openSubMenuItems.push('parametric-maps')\n    }\n\n    let annotationGroupMenu\n\n    if (annotations.length > 0) {\n      annotations.forEach((annotation) => {\n        const roi = this.volumeViewer.getROI(annotation.uid)\n        const key = _getRoiKey(roi) as string\n        const color = this.roiStyles[key] !== undefined\n          ? this.roiStyles[key].stroke?.color.slice(0, 3)\n          : DEFAULT_ANNOTATION_COLOR_PALETTE[\n            Object.keys(this.roiStyles).length % DEFAULT_ANNOTATION_COLOR_PALETTE.length\n          ]\n        this.defaultAnnotationStyles[annotation.uid] = {\n          color,\n          opacity: DEFAULT_ANNOTATION_OPACITY\n        } as any\n\n        this.roiStyles[key] = this.generateRoiStyle(\n          this.defaultAnnotationStyles[annotation.uid]\n        )\n      })\n    }\n\n    if (annotationGroups.length > 0) {\n      const annotationGroupMetadata: {\n        [annotationGroupUID: string]: dmv.metadata.MicroscopyBulkSimpleAnnotations\n      } = {}\n      const defaultAnnotationGroupStyles: {\n        [annotationUID: string]: {\n          opacity: number\n          color: number[]\n        }\n      } = {}\n      annotationGroups.forEach(annotationGroup => {\n        defaultAnnotationGroupStyles[annotationGroup.uid] = this.volumeViewer.getAnnotationGroupStyle(\n          annotationGroup.uid\n        )\n        annotationGroupMetadata[annotationGroup.uid] = this.volumeViewer.getAnnotationGroupMetadata(\n          annotationGroup.uid\n        )\n      })\n      annotationGroupMenu = (\n        <Menu.SubMenu key='annotation-groups' title='Annotation Groups'>\n          <AnnotationGroupList\n            annotationGroups={annotationGroups}\n            metadata={annotationGroupMetadata}\n            // when adding annotationGroups to annotationCategory list,\n            // make so that this is uses this.defaultAnnotationStyles later instead of defaultAnnotationGroupStyles\n            defaultAnnotationGroupStyles={defaultAnnotationGroupStyles}\n            visibleAnnotationGroupUIDs={this.state.visibleAnnotationGroupUIDs}\n            onAnnotationGroupVisibilityChange={this.handleAnnotationGroupVisibilityChange}\n            onAnnotationGroupStyleChange={this.handleAnnotationGroupStyleChange}\n          />\n        </Menu.SubMenu>\n      )\n      openSubMenuItems.push('annotationGroups')\n    }\n\n    let toolbar\n    let toolbarHeight = '0px'\n    const annotationTools = [\n      <Button\n        tooltip='Draw ROI [Alt+D]'\n        icon={FaDrawPolygon}\n        onClick={this.handleRoiDrawing}\n        isSelected={this.state.isRoiDrawingActive}\n        key='draw-roi-button'\n      />,\n      <Button\n        tooltip='Modify ROIs [Alt+M]'\n        icon={FaHandPointer}\n        onClick={this.handleRoiModification}\n        isSelected={this.state.isRoiModificationActive}\n        key='modify-roi-button'\n      />,\n      <Button\n        tooltip='Translate ROIs [Alt+T]'\n        icon={FaHandPaper}\n        onClick={this.handleRoiTranslation}\n        isSelected={this.state.isRoiTranslationActive}\n        key='translate-roi-button'\n      />,\n      <Button\n        tooltip='Remove selected ROI [Alt+R]'\n        onClick={this.handleRoiRemoval}\n        icon={FaTrash}\n        key='remove-roi-button'\n      />,\n      <Button\n        tooltip='Show/Hide ROIs [Alt+V]'\n        icon={this.state.areRoisHidden ? FaEye : FaEyeSlash}\n        onClick={this.handleRoiVisibilityChange}\n        isSelected={this.state.areRoisHidden}\n        key='toggle-roi-visibility-button'\n      />,\n      <Button\n        tooltip='Save ROIs [Alt+S]'\n        icon={FaSave}\n        onClick={this.handleReportGeneration}\n        key='generate-report-button'\n      />\n    ]\n    const controlTools = [\n      <Button\n        tooltip='Go to [Alt+G]'\n        icon={FaCrosshairs}\n        onClick={this.handleGoTo}\n        key='go-to-slide-position-button'\n      />\n    ]\n    if (this.props.enableAnnotationTools) {\n      toolbar = (\n        <Row justify='start'>\n          {annotationTools.map((item, i) => {\n            return <React.Fragment key={i}>{item}</React.Fragment>\n          })}\n          {controlTools.map((item, i) => {\n            return <React.Fragment key={i}>{item}</React.Fragment>\n          })}\n        </Row>\n      )\n      toolbarHeight = '50px'\n    }\n\n    let cursor = 'default'\n    if (this.state.isLoading) {\n      cursor = 'progress'\n    }\n\n    let selectedRoiInformation\n    if (this.state.selectedRoi != null) {\n      const roiAttributes: Array<{\n        name: string\n        value: string\n        unit?: string\n      }> = [\n        {\n          name: 'UID',\n          value: this.state.selectedRoi.uid\n        }\n      ]\n      const roiScoordAttributes: Array<{\n        name: string\n        value: string\n      }> = [\n        {\n          name: 'Graphic type',\n          value: this.state.selectedRoi.scoord3d.graphicType\n        }\n      ]\n      const roiEvaluationAttributes: Array<{\n        name: string\n        value: string\n      }> = []\n      this.state.selectedRoi.evaluations.forEach(item => {\n        if (item.ValueType === 'CODE') {\n          const codeItem = item as dcmjs.sr.valueTypes.CodeContentItem\n          roiEvaluationAttributes.push({\n            name: codeItem.ConceptNameCodeSequence[0].CodeMeaning,\n            value: codeItem.ConceptCodeSequence[0].CodeMeaning\n          })\n        } else {\n          const textItem = item as dcmjs.sr.valueTypes.TextContentItem\n          roiEvaluationAttributes.push({\n            name: textItem.ConceptNameCodeSequence[0].CodeMeaning,\n            value: textItem.TextValue\n          })\n        }\n      })\n      const roiMeasurmentAttributesPerOpticalPath: {\n        [identifier: string]: Array<{\n          name: string\n          value: string\n          unit?: string\n        }>\n      } = {}\n      this.state.selectedRoi.measurements.forEach(item => {\n        let identifier = 'default'\n        if (item.ContentSequence != null) {\n          const refItems = findContentItemsByName({\n            content: item.ContentSequence,\n            name: new dcmjs.sr.coding.CodedConcept({\n              value: '121112',\n              meaning: 'Source of Measurement',\n              schemeDesignator: 'DCM'\n            })\n          })\n          if (refItems.length > 0) {\n            identifier = (\n              refItems[0]\n                // @ts-expect-error\n                .ReferencedSOPSequence[0]\n                .ReferencedOpticalPathIdentifier\n            )\n          }\n        }\n        if (!(identifier in roiMeasurmentAttributesPerOpticalPath)) {\n          roiMeasurmentAttributesPerOpticalPath[identifier] = []\n        }\n        const measuredValueItem = item.MeasuredValueSequence[0]\n        roiMeasurmentAttributesPerOpticalPath[identifier].push({\n          name: item.ConceptNameCodeSequence[0].CodeMeaning,\n          value: measuredValueItem.NumericValue.toString(),\n          unit: measuredValueItem.MeasurementUnitsCodeSequence[0].CodeMeaning\n        })\n      })\n      const createRoiDescription = (\n        attributes: Array<{ name: string, value: string, unit?: string }>\n      ): React.ReactNode[] => {\n        return attributes.map(item => {\n          let value\n          if (item.unit != null) {\n            value = `${item.value} [${item.unit}]`\n          } else {\n            value = item.value\n          }\n          return (\n            <Descriptions.Item\n              key={item.name}\n              label={item.name}\n            >\n              {value}\n            </Descriptions.Item>\n          )\n        })\n      }\n      const roiDescriptions = createRoiDescription(roiAttributes)\n      const roiScoordDescriptions = createRoiDescription(\n        roiScoordAttributes\n      )\n      const roiEvaluationDescriptions = createRoiDescription(\n        roiEvaluationAttributes\n      )\n      const roiMeasurementDescriptions = []\n      for (const identifier in roiMeasurmentAttributesPerOpticalPath) {\n        const descriptions = createRoiDescription(\n          roiMeasurmentAttributesPerOpticalPath[identifier]\n        )\n        if (identifier === 'default') {\n          roiMeasurementDescriptions.push(descriptions)\n        } else {\n          roiMeasurementDescriptions.push(\n            <>\n              <Divider orientation='left' orientationMargin={0} dashed plain>\n                {identifier}\n              </Divider>\n              {descriptions}\n            </>\n          )\n        }\n      }\n      selectedRoiInformation = (\n        <>\n          <Descriptions layout='horizontal' column={1}>\n            {roiDescriptions}\n          </Descriptions>\n          <Divider orientation='left' orientationMargin={0}>\n            Spatial coordinates\n          </Divider>\n          <Descriptions layout='horizontal' column={1}>\n            {roiScoordDescriptions}\n          </Descriptions>\n          <Divider orientation='left' orientationMargin={0}>\n            Evaluations\n          </Divider>\n          <Descriptions layout='horizontal' column={1}>\n            {roiEvaluationDescriptions}\n          </Descriptions>\n          <Divider orientation='left' orientationMargin={0}>\n            Measurements\n          </Divider>\n          <Descriptions layout='horizontal' column={1}>\n            {roiMeasurementDescriptions}\n          </Descriptions>\n        </>\n      )\n    }\n\n    return (\n      <Layout style={{ height: '100%' }} hasSider>\n        <Layout.Content style={{ height: '100%' }}>\n          {toolbar}\n\n          <div\n            style={{\n              height: `calc(100% - ${toolbarHeight})`,\n              overflow: 'hidden',\n              cursor: cursor\n            }}\n            ref={this.volumeViewportRef}\n          />\n\n          <Modal\n            open={this.state.isAnnotationModalVisible}\n            title='Configure annotations'\n            onOk={this.handleAnnotationConfigurationCompletion}\n            onCancel={this.handleAnnotationConfigurationCancellation}\n            okText='Select'\n          >\n            <Space align='start' direction='vertical'>\n              {annotationConfigurations}\n            </Space>\n          </Modal>\n\n          <Modal\n            open={this.state.isSelectedRoiModalVisible}\n            title='Selected ROI'\n            onCancel={this.handleRoiSelectionCancellation}\n            maskClosable\n            footer={null}\n          >\n            <Space align='start' direction='vertical'>\n              {selectedRoiInformation}\n            </Space>\n          </Modal>\n\n          <Modal\n            open={this.state.isGoToModalVisible}\n            title='Go to slide position'\n            onOk={this.handleSlidePositionSelection}\n            onCancel={this.handleSlidePositionSelectionCancellation}\n            okText='Select'\n          >\n            <Space align='start' direction='vertical'>\n              <InputNumber\n                placeholder={\n                  '[' +\n                  `${this.state.validXCoordinateRange[0]}` +\n                  ', ' +\n                  `${this.state.validXCoordinateRange[1]}` +\n                  ']'\n                }\n                prefix='X Coordinate [mm]'\n                onChange={this.handleXCoordinateSelection}\n                onPressEnter={this.handleXCoordinateSelection}\n                controls={false}\n                addonAfter={\n                  this.state.isSelectedXCoordinateValid\n                    ? (\n                      <CheckOutlined style={{ color: 'rgba(0,0,0,.45)' }} />\n                      )\n                    : (\n                      <StopOutlined style={{ color: 'rgba(0,0,0,.45)' }} />\n                      )\n                }\n              />\n              <InputNumber\n                placeholder={\n                  '[' +\n                  `${this.state.validYCoordinateRange[0]}` +\n                  ', ' +\n                  `${this.state.validYCoordinateRange[1]}` +\n                  ']'\n                }\n                prefix='Y Coordinate [mm]'\n                onChange={this.handleYCoordinateSelection}\n                onPressEnter={this.handleYCoordinateSelection}\n                controls={false}\n                addonAfter={\n                  this.state.isSelectedYCoordinateValid\n                    ? (\n                      <CheckOutlined style={{ color: 'rgba(0,0,0,.45)' }} />\n                      )\n                    : (\n                      <StopOutlined style={{ color: 'rgba(0,0,0,.45)' }} />\n                      )\n                }\n              />\n              <InputNumber\n                placeholder='[0 - 40]'\n                prefix='Magnification'\n                onChange={this.handleMagnificationSelection}\n                onPressEnter={this.handleMagnificationSelection}\n                controls={false}\n                addonAfter={\n                  this.state.isSelectedMagnificationValid\n                    ? (\n                      <CheckOutlined style={{ color: 'rgba(0,0,0,.45)' }} />\n                      )\n                    : (\n                      <StopOutlined style={{ color: 'rgba(0,0,0,.45)' }} />\n                      )\n                }\n              />\n            </Space>\n          </Modal>\n\n          <Modal\n            open={this.state.isReportModalVisible}\n            title='Verify and save report'\n            onOk={this.handleReportVerification}\n            onCancel={this.handleReportCancellation}\n            okText='Save'\n          >\n            {report}\n          </Modal>\n        </Layout.Content>\n\n        <Layout.Sider\n          width={300}\n          reverseArrow\n          style={{\n            borderLeft: 'solid',\n            borderLeftWidth: 0.25,\n            overflow: 'hidden',\n            background: 'none'\n          }}\n        >\n          <Menu\n            mode='inline'\n            defaultOpenKeys={openSubMenuItems}\n            style={{ height: '100%' }}\n            inlineIndent={14}\n            forceSubMenuRender\n            onOpenChange={() => {\n              // Give menu item time to render before updating viewer size\n              setTimeout(() => {\n                if (this.labelViewer != null) {\n                  this.labelViewer.resize()\n                }\n              }, 100)\n            }}\n          >\n            {this.labelViewportRef.current != null && (\n              <Menu.SubMenu key='label' title='Slide label'>\n                <Menu.Item style={{ height: '100%' }} key='image'>\n                  <div\n                    style={{ height: '220px' }}\n                    ref={this.labelViewportRef}\n                  />\n                </Menu.Item>\n              </Menu.SubMenu>\n            )}\n            {specimenMenu}\n            {equipmentMenu}\n            {opticalPathMenu}\n            {presentationStateMenu}\n            <Menu.SubMenu key='annotations' title='Annotations'>\n              {annotationMenuItems}\n            </Menu.SubMenu>\n            {annotationGroupMenu}\n            {annotations.length === 0\n              ? (\n                <></>\n                )\n              : (\n                <Menu.SubMenu\n                  key='annotation-category'\n                  title='Annotation Categories'\n                >\n                  <AnnotationCategoryList\n                    annotations={annotations}\n                    onChange={this.handleAnnotationVisibilityChange}\n                    checkedAnnotationUids={this.state.visibleRoiUIDs}\n                    onStyleChange={this.handleRoiStyleChange}\n                    defaultAnnotationStyles={this.defaultAnnotationStyles}\n                  />\n                </Menu.SubMenu>\n                )}\n            {segmentationMenu}\n            {parametricMapMenu}\n          </Menu>\n        </Layout.Sider>\n        {this.state.isHoveredRoiTooltipVisible &&\n        this.state.hoveredRoiAttributes.length > 0\n          ? (\n            <HoveredRoiTooltip\n              xPosition={this.state.hoveredRoiTooltipX}\n              yPosition={this.state.hoveredRoiTooltipY}\n              attributes={this.state.hoveredRoiAttributes}\n            />\n            )\n          : (\n            <></>\n            )}\n      </Layout>\n    )\n  }\n}\n\nexport default withRouter(SlideViewer)\n","import * as dmv from 'dicom-microscopy-viewer'\nimport { CustomError, errorTypes } from '../utils/CustomError'\nimport NotificationMiddleware, {\n  NotificationMiddlewareContext\n} from '../services/NotificationMiddleware'\n\nenum ImageFlavors {\n  VOLUME = 'VOLUME',\n  LABEL = 'LABEL',\n  OVERVIEW = 'OVERVIEW',\n  THUMBNAIL = 'THUMBNAIL'\n}\n\nconst hasImageFlavor = (\n  image: dmv.metadata.VLWholeSlideMicroscopyImage,\n  imageFlavor: ImageFlavors\n): boolean => {\n  return image.ImageType[2] === imageFlavor\n}\n\nconst areSameAcquisition = (\n  image: dmv.metadata.VLWholeSlideMicroscopyImage,\n  refImage: dmv.metadata.VLWholeSlideMicroscopyImage\n): boolean => {\n  if (image.AcquisitionUID != null) {\n    return image.AcquisitionUID === refImage.AcquisitionUID\n  }\n  return false\n}\n\ninterface SlideImageCollection {\n  acquisitionUID?: string\n  frameOfReferenceUID: string\n  containerIdentifier: string\n  volumeImages: dmv.metadata.VLWholeSlideMicroscopyImage[]\n  labelImages: dmv.metadata.VLWholeSlideMicroscopyImage[]\n  overviewImages: dmv.metadata.VLWholeSlideMicroscopyImage[]\n}\n\ninterface SlideOptions {\n  images: dmv.metadata.VLWholeSlideMicroscopyImage[]\n  description?: string\n}\n\n/**\n * Slide - collection of images with the same Frame of Reference UID and\n * Container Identifier.\n */\nclass Slide {\n  readonly description: string\n  readonly acquisitionUID: string | null | undefined\n  readonly frameOfReferenceUID: string\n  readonly containerIdentifier: string\n  readonly seriesInstanceUIDs: string[]\n  readonly opticalPathIdentifiers: string[]\n  readonly pyramidUIDs: string[] = []\n  readonly areVolumeImagesMonochrome: boolean\n  readonly volumeImages: dmv.metadata.VLWholeSlideMicroscopyImage[]\n  readonly labelImages: dmv.metadata.VLWholeSlideMicroscopyImage[]\n  readonly overviewImages: dmv.metadata.VLWholeSlideMicroscopyImage[]\n\n  /**\n   * @param options\n   * @param options.images - Metadata of images associated with the slide\n   * @param options.description - Description of the slide\n   */\n  constructor (\n    options: SlideOptions\n  ) {\n    if (options.images.length === 0) {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.ENCODINGANDDECODING,\n          'Value of option \"images\" have been non-zero length.'\n        )\n      )\n    }\n\n    const seriesInstanceUIDs = new Set([] as string[])\n    const acquisitionUIDs = new Set([] as string[])\n    const opticalPathIdentifiers = new Set([] as string[])\n    const containerIdentifiers = new Set([] as string[])\n    const frameOfReferenceUIDs = {\n      VOLUME: new Set([] as string[]),\n      LABEL: new Set([] as string[]),\n      OVERVIEW: new Set([] as string[])\n    }\n    const pyramidUIDs: {\n      [key: string]: { [opticalPathIdentifier: string]: Set<string> }\n    } = {\n      VOLUME: {}\n    }\n    const volumeImages: dmv.metadata.VLWholeSlideMicroscopyImage[] = []\n    const labelImages: dmv.metadata.VLWholeSlideMicroscopyImage[] = []\n    const overviewImages: dmv.metadata.VLWholeSlideMicroscopyImage[] = []\n    options.images.forEach((image) => {\n      containerIdentifiers.add(image.ContainerIdentifier)\n      seriesInstanceUIDs.add(image.SeriesInstanceUID)\n      image.OpticalPathSequence.forEach(item => {\n        opticalPathIdentifiers.add(item.OpticalPathIdentifier)\n      })\n      if (image.AcquisitionUID != null) {\n        acquisitionUIDs.add(image.AcquisitionUID)\n      }\n      if (\n        hasImageFlavor(image, ImageFlavors.VOLUME) ||\n        hasImageFlavor(image, ImageFlavors.THUMBNAIL)\n      ) {\n        frameOfReferenceUIDs.VOLUME.add(image.FrameOfReferenceUID)\n        if (image.PyramidUID != null) {\n          for (const identifier in opticalPathIdentifiers) {\n            pyramidUIDs.VOLUME[identifier].add(image.PyramidUID)\n          }\n        }\n        volumeImages.push(image)\n      } else if (hasImageFlavor(image, ImageFlavors.LABEL)) {\n        frameOfReferenceUIDs.LABEL.add(image.FrameOfReferenceUID)\n        labelImages.push(image)\n      } else if (hasImageFlavor(image, ImageFlavors.OVERVIEW)) {\n        frameOfReferenceUIDs.OVERVIEW.add(image.FrameOfReferenceUID)\n        overviewImages.push(image)\n      }\n    })\n    if (volumeImages.length === 0) {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.ENCODINGANDDECODING,\n          'At least one VOLUME image must be provided for a slide.'\n        )\n      )\n    } else {\n      if (acquisitionUIDs.size > 1) {\n        NotificationMiddleware.onError(\n          NotificationMiddlewareContext.SLIM,\n          new CustomError(\n            errorTypes.ENCODINGANDDECODING,\n            'All VOLUME images of a slide must have the same number of ' +\n            'Samples per Pixel.'\n          )\n        )\n      }\n      const samplesPerPixel = new Set([] as number[])\n      volumeImages.forEach((image) => {\n        samplesPerPixel.add(image.SamplesPerPixel)\n      })\n      if (samplesPerPixel.size > 1) {\n        NotificationMiddleware.onError(\n          NotificationMiddlewareContext.SLIM,\n          new CustomError(\n            errorTypes.ENCODINGANDDECODING,\n            'All VOLUME images of a slide must have the same number of ' +\n            'Samples per Pixel.'\n          )\n        )\n      }\n      const isNotResampled = volumeImages.filter(image => {\n        return image.ImageType[3] !== 'RESAMPLED'\n      })\n      if (isNotResampled.length > opticalPathIdentifiers.size) {\n        console.warn(\n          'the set of VOLUME images of a slide must contain only a single ' +\n            'image that has not been resampled per optical path'\n        )\n      }\n    }\n    this.volumeImages = volumeImages\n    this.labelImages = labelImages\n    this.overviewImages = overviewImages\n\n    this.seriesInstanceUIDs = [...seriesInstanceUIDs]\n    this.opticalPathIdentifiers = [...opticalPathIdentifiers]\n\n    if (containerIdentifiers.size !== 1) {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.ENCODINGANDDECODING,\n          'All images of a slide must have the same Container Identifier.'\n        )\n      )\n    }\n    this.containerIdentifier = [...containerIdentifiers][0]\n\n    if (frameOfReferenceUIDs.VOLUME.size !== 1) {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.ENCODINGANDDECODING,\n          'All VOLUME images of a slide must have ' +\n          'the same Frame of Reference UID.'\n        )\n      )\n    }\n    this.frameOfReferenceUID = [...frameOfReferenceUIDs.VOLUME][0]\n\n    let requirePyramidUID = false\n    if (Object.keys(pyramidUIDs.VOLUME).length > 0) {\n      requirePyramidUID = true\n    }\n    this.opticalPathIdentifiers.forEach(identifier => {\n      if (pyramidUIDs.VOLUME[identifier] != null) {\n        if (pyramidUIDs.VOLUME[identifier].size > 1) {\n          NotificationMiddleware.onError(\n            NotificationMiddlewareContext.SLIM,\n            new CustomError(\n              errorTypes.ENCODINGANDDECODING,\n              `All VOLUME images for optical path \"${identifier}\"` +\n              'must be part of the same multi-resolution pyramid.'\n            )\n          )\n        } else if (pyramidUIDs.VOLUME[identifier].size === 1) {\n          this.pyramidUIDs.push([...pyramidUIDs.VOLUME[identifier]][0])\n        } else {\n          NotificationMiddleware.onError(\n            NotificationMiddlewareContext.SLIM,\n            new CustomError(\n              errorTypes.ENCODINGANDDECODING,\n              `The VOLUME images for optical path \"${identifier}\" ` +\n              'lack the Pyramid UID, while the images for other optical paths ' +\n              'contain it.'\n            )\n          )\n        }\n      } else {\n        if (requirePyramidUID) {\n          NotificationMiddleware.onError(\n            NotificationMiddlewareContext.SLIM,\n            new CustomError(\n              errorTypes.ENCODINGANDDECODING,\n              `The VOLUME images for optical path \"${identifier}\" ` +\n              'lack the Pyramid UID, while the images for other optical paths ' +\n              'contain it.'\n            )\n          )\n        }\n      }\n    })\n\n    if (acquisitionUIDs.size > 1) {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.ENCODINGANDDECODING,\n          'All VOLUME images of a slide must be part of the same  ' +\n          'acquisition and have the same Acquisition UID.'\n        )\n      )\n    } else if (acquisitionUIDs.size === 1) {\n      this.acquisitionUID = [...acquisitionUIDs][0]\n    } else {\n      this.acquisitionUID = null\n    }\n\n    this.areVolumeImagesMonochrome = (\n      this.volumeImages[0].SamplesPerPixel === 1 &&\n      this.volumeImages[0].PhotometricInterpretation === 'MONOCHROME2'\n    )\n\n    this.description = (\n      options.description !== undefined ? options.description : ''\n    )\n  }\n}\n\n/**\n * Create slides.\n *\n * @param imagesPerSeries - Image instances grouped per series\n * @param referenceSeriesInstanceUID - Unique identifier of the series that serves as a reference for the slide\n * @returns Slides\n */\nconst createSlides = (\n  images: dmv.metadata.VLWholeSlideMicroscopyImage[][]\n): Slide[] => {\n  const slideMetadata: SlideImageCollection[] = []\n  images.forEach((series) => {\n    if (series.length > 0) {\n      const volumeImages = series.filter((image) => {\n        return (\n          hasImageFlavor(image, ImageFlavors.VOLUME) ||\n          hasImageFlavor(image, ImageFlavors.THUMBNAIL)\n        )\n      })\n      if (volumeImages.length > 0) {\n        const refImage = volumeImages[0]\n        const filteredVolumeImages = volumeImages.filter((image) => {\n          return refImage.SamplesPerPixel === image.SamplesPerPixel\n        })\n        const slideMetadataIndex = slideMetadata.findIndex((slide) => {\n          return _doesImageBelongToSlide(slide, refImage)\n        })\n\n        const labelImages = series.filter((image) => {\n          return hasImageFlavor(image, ImageFlavors.LABEL)\n        })\n        let filteredLabelImages: dmv.metadata.VLWholeSlideMicroscopyImage[]\n        if (labelImages.length > 1) {\n          filteredLabelImages = labelImages.filter((image) => {\n            return areSameAcquisition(image, refImage)\n          })\n        } else {\n          filteredLabelImages = labelImages\n        }\n        const overviewImages = series.filter((image) => {\n          return hasImageFlavor(image, ImageFlavors.OVERVIEW)\n        })\n        let filteredOverviewImages: dmv.metadata.VLWholeSlideMicroscopyImage[]\n        if (overviewImages.length > 1) {\n          filteredOverviewImages = overviewImages.filter((image) => {\n            return areSameAcquisition(image, refImage)\n          })\n        } else {\n          filteredOverviewImages = overviewImages\n        }\n\n        if (slideMetadataIndex === -1) {\n          const slideMetadataItem: SlideImageCollection = {\n            acquisitionUID: refImage.AcquisitionUID,\n            frameOfReferenceUID: refImage.FrameOfReferenceUID,\n            containerIdentifier: refImage.ContainerIdentifier,\n            volumeImages: filteredVolumeImages,\n            labelImages: filteredLabelImages,\n            overviewImages: filteredOverviewImages\n          }\n          slideMetadata.push(slideMetadataItem)\n        } else {\n          const slideMetadataItem = slideMetadata[slideMetadataIndex]\n          slideMetadataItem.volumeImages.push(...filteredVolumeImages)\n          slideMetadataItem.labelImages.push(...filteredLabelImages)\n          slideMetadataItem.overviewImages.push(...filteredOverviewImages)\n        }\n      }\n    }\n  })\n\n  let slides: Slide[] = slideMetadata.map((item) => {\n    return new Slide({\n      images: [\n        ...item.volumeImages,\n        ...item.labelImages,\n        ...item.overviewImages\n      ]\n    })\n  })\n  slides = slides.sort((a, b) => {\n    const imgA = a.volumeImages[0]\n    const imgB = b.volumeImages[0]\n    if (imgA.ContainerIdentifier != null && imgB.ContainerIdentifier != null) {\n      return Number(imgA.ContainerIdentifier) - Number(imgB.ContainerIdentifier)\n    } else {\n      return 0\n    }\n  })\n\n  return slides\n}\n\n/**\n * Check if instance belongs to the slide.\n *\n * Compares values of Frame of Reference UID and Container Identifier attributes.\n *\n * @param slide - Slide metadata object\n * @param image - Metadata of VOLUME, LABEL or OVERVIEW image instance\n */\nfunction _doesImageBelongToSlide (\n  slide: SlideImageCollection,\n  image: dmv.metadata.VLWholeSlideMicroscopyImage\n): boolean {\n  if (\n    slide.frameOfReferenceUID === image.FrameOfReferenceUID &&\n    slide.containerIdentifier === image.ContainerIdentifier &&\n    slide.acquisitionUID === image.AcquisitionUID\n  ) {\n    return true\n  }\n  return false\n}\n\nexport { Slide, createSlides }\n","import * as dmv from 'dicom-microscopy-viewer'\n\nimport DicomWebManager from '../DicomWebManager'\nimport { StorageClasses } from '../data/uids'\nimport { CustomError, errorTypes } from '../utils/CustomError'\nimport NotificationMiddleware, {\n  NotificationMiddlewareContext\n} from './NotificationMiddleware'\nimport { createSlides, Slide } from '../data/slides'\n\ninterface FetchImageMetadataParams {\n  clients: { [key: string]: DicomWebManager }\n  studyInstanceUID: string\n  onSuccess: (slides: Slide[]) => void\n  onError: (error: Error) => void\n}\n\nexport const fetchImageMetadata = async ({\n  clients,\n  studyInstanceUID,\n  onSuccess,\n  onError\n}: FetchImageMetadataParams): Promise<void> => {\n  try {\n    const images: dmv.metadata.VLWholeSlideMicroscopyImage[][] = []\n    console.info(`search for series of study \"${studyInstanceUID}\"...`)\n\n    const client = clients[StorageClasses.VL_WHOLE_SLIDE_MICROSCOPY_IMAGE]\n    const matchedSeries = await client.searchForSeries({\n      queryParams: {\n        Modality: 'SM',\n        StudyInstanceUID: studyInstanceUID\n      }\n    })\n\n    await Promise.all(\n      matchedSeries.map(async (s) => {\n        const { dataset } = dmv.metadata.formatMetadata(s)\n        const loadingSeries = dataset as dmv.metadata.Series\n        console.info(\n          `retrieve metadata of series \"${loadingSeries.SeriesInstanceUID}\"`\n        )\n        const retrievedMetadata = await client.retrieveSeriesMetadata({\n          studyInstanceUID: studyInstanceUID,\n          seriesInstanceUID: loadingSeries.SeriesInstanceUID\n        })\n\n        const seriesImages: dmv.metadata.VLWholeSlideMicroscopyImage[] = []\n        retrievedMetadata.forEach((item) => {\n          if (\n            item['00080016']?.Value?.[0] ===\n            StorageClasses.VL_WHOLE_SLIDE_MICROSCOPY_IMAGE\n          ) {\n            const image = new dmv.metadata.VLWholeSlideMicroscopyImage({\n              metadata: item\n            })\n            seriesImages.push(image)\n          }\n        })\n\n        if (seriesImages.length > 0) {\n          images.push(seriesImages)\n        }\n      })\n    )\n    const newSlides = createSlides(images)\n    onSuccess(newSlides)\n  } catch (err) {\n    console.error(err)\n    const customError = new CustomError(\n      errorTypes.ENCODINGANDDECODING,\n      'Image metadata could not be retrieved or decoded.'\n    )\n    onError(customError)\n    NotificationMiddleware.onError(\n      NotificationMiddlewareContext.SLIM,\n      customError\n    )\n  }\n}\n","import { useState, useEffect } from 'react'\n\nimport DicomWebManager from '../DicomWebManager'\nimport { Slide } from '../data/slides'\nimport { fetchImageMetadata } from '../services/fetchImageMetadata'\n\ninterface UseSlidesProps {\n  clients: { [key: string]: DicomWebManager }\n  studyInstanceUID: string\n}\n\ninterface UseSlidesReturn {\n  slides: Slide[]\n  isLoading: boolean\n  error: Error | null\n}\n\nconst slidesCache = new Map<string, Slide[]>()\nconst pendingRequests = new Map<string, Promise<Slide[]>>()\n\n/**\n * Hook to fetch and manage whole slide microscopy images for a given study.\n * Values are cached so they can be reused if props are not provided.\n *\n * @param props - Hook configuration props\n * @param props.clients - Map of DICOM web clients keyed by storage class\n */\nexport const useSlides = ({ clients, studyInstanceUID }: UseSlidesProps): UseSlidesReturn => {\n  const [slides, setSlides] = useState<Slide[]>([])\n  const [isLoading, setIsLoading] = useState<boolean>(false)\n  const [error, setError] = useState<Error | null>(null)\n\n  useEffect(() => {\n    if (studyInstanceUID === undefined) {\n      setSlides([])\n      setIsLoading(false)\n      return\n    }\n\n    const cachedData = slidesCache.get(studyInstanceUID)\n    if (cachedData !== undefined) {\n      setSlides(cachedData)\n      setIsLoading(false)\n      return\n    }\n\n    setIsLoading(true)\n\n    const fetchSlides = async (): Promise<void> => {\n      // Check if there's already a pending request for this study\n      let pendingRequest = pendingRequests.get(studyInstanceUID)\n\n      if (pendingRequest === undefined) {\n        // Create a new promise for this request\n        pendingRequest = new Promise((resolve, reject): void => {\n          fetchImageMetadata({\n            clients,\n            studyInstanceUID,\n            onSuccess: (newSlides) => {\n              slidesCache.set(studyInstanceUID, newSlides)\n              resolve(newSlides)\n            },\n            onError: (err) => {\n              reject(err)\n            }\n          }).catch((err) => {\n            reject(err)\n          })\n        })\n        pendingRequests.set(studyInstanceUID, pendingRequest)\n      }\n\n      try {\n        const newSlides = await pendingRequest\n        setSlides(newSlides)\n        setError(null)\n      } catch (err) {\n        setError(err as Error)\n        setSlides([])\n      } finally {\n        pendingRequests.delete(studyInstanceUID)\n        setIsLoading(false)\n      }\n    }\n\n    void fetchSlides()\n  }, [clients, studyInstanceUID])\n\n  return { slides, isLoading, error }\n}\n","import { Routes, Route, useLocation, useParams } from 'react-router-dom'\nimport { Layout, Menu } from 'antd'\n\nimport { AnnotationSettings } from '../AppConfig'\nimport ClinicalTrial from './ClinicalTrial'\nimport DicomWebManager from '../DicomWebManager'\nimport Patient from './Patient'\nimport Study from './Study'\nimport SlideList from './SlideList'\nimport SlideViewer from './SlideViewer'\n\nimport { User } from '../auth'\nimport { Slide } from '../data/slides'\nimport { RouteComponentProps, withRouter } from '../utils/router'\nimport { useSlides } from '../hooks/useSlides'\n\nfunction ParametrizedSlideViewer ({\n  clients,\n  slides,\n  user,\n  app,\n  preload,\n  enableAnnotationTools,\n  annotations\n}: {\n  clients: { [key: string]: DicomWebManager }\n  slides: Slide[]\n  user?: User\n  app: {\n    name: string\n    version: string\n    uid: string\n    organization?: string\n  }\n  preload: boolean\n  enableAnnotationTools: boolean\n  annotations: AnnotationSettings[]\n}): JSX.Element | null {\n  const { studyInstanceUID, seriesInstanceUID } = useParams()\n  const location = useLocation()\n\n  const selectedSlide = slides.find((slide: Slide) => {\n    return slide.seriesInstanceUIDs.find((uid: string) => {\n      return uid === seriesInstanceUID\n    })\n  })\n  const searchParams = new URLSearchParams(location.search)\n  let presentationStateUID: string | null | undefined\n  if (!searchParams.has('access_token')) {\n    presentationStateUID = searchParams.get('state')\n    if (presentationStateUID === null) {\n      presentationStateUID = undefined\n    }\n  }\n  let viewer = null\n  if (selectedSlide != null) {\n    viewer = (\n      <SlideViewer\n        clients={clients}\n        studyInstanceUID={studyInstanceUID}\n        seriesInstanceUID={seriesInstanceUID}\n        selectedPresentationStateUID={presentationStateUID}\n        slide={selectedSlide}\n        preload={preload}\n        annotations={annotations}\n        enableAnnotationTools={enableAnnotationTools}\n        app={app}\n        user={user}\n      />\n    )\n  }\n  return viewer\n}\n\ninterface ViewerProps extends RouteComponentProps {\n  clients: { [key: string]: DicomWebManager }\n  studyInstanceUID: string\n  app: {\n    name: string\n    version: string\n    uid: string\n    organization?: string\n  }\n  annotations: AnnotationSettings[]\n  enableAnnotationTools: boolean\n  preload: boolean\n  user?: {\n    name: string\n    email: string\n  }\n}\n\nfunction Viewer (props: ViewerProps): JSX.Element | null {\n  const { clients, studyInstanceUID, location, navigate } = props\n  const { slides, isLoading } = useSlides({ clients, studyInstanceUID })\n\n  const handleSeriesSelection = ({ seriesInstanceUID }: { seriesInstanceUID: string }): void => {\n    console.info(`switch to series \"${seriesInstanceUID}\"`)\n    let urlPath = (\n      `/studies/${studyInstanceUID}` +\n      `/series/${seriesInstanceUID}`\n    )\n\n    if (location.pathname.includes('/projects/')) {\n      urlPath = location.pathname\n      if (!location.pathname.includes('/series/')) {\n        urlPath += `/series/${seriesInstanceUID}`\n      } else {\n        urlPath = urlPath.replace(/\\/series\\/[^/]+/, `/series/${seriesInstanceUID}`)\n      }\n    }\n\n    if (\n      location.pathname.includes('/series/') &&\n      location.search != null\n    ) {\n      urlPath += location.search\n    }\n\n    navigate(urlPath, { replace: true })\n  }\n\n  if (isLoading) {\n    return null\n  }\n\n  if (slides.length === 0) {\n    return null\n  }\n\n  const firstSlide = slides[0]\n  const volumeInstances = firstSlide.volumeImages\n  if (volumeInstances.length === 0) {\n    return null\n  }\n  const refImage = volumeInstances[0]\n\n  /* If a series is encoded in the path, route the viewer to this series.\n   * Otherwise select the first series correspondent to\n   * the first slide contained in the study.\n   */\n  let selectedSeriesInstanceUID: string\n  if (location.pathname.includes('series/')) {\n    const seriesFragment = location.pathname.split('series/')[1]\n    selectedSeriesInstanceUID = seriesFragment.includes('/') ? seriesFragment.split('/')[0] : seriesFragment\n  } else {\n    selectedSeriesInstanceUID = volumeInstances[0].SeriesInstanceUID\n  }\n\n  let clinicalTrialMenu\n  if (refImage.ClinicalTrialSponsorName != null) {\n    clinicalTrialMenu = (\n      <Menu.SubMenu key='clinical-trial' title='Clinical Trial'>\n        <ClinicalTrial metadata={refImage} />\n      </Menu.SubMenu>\n    )\n  }\n\n  return (\n    <Layout style={{ height: '100%' }} hasSider>\n      <Layout.Sider\n        width={300}\n        style={{\n          height: '100%',\n          borderRight: 'solid',\n          borderRightWidth: 0.25,\n          overflow: 'hidden',\n          background: 'none'\n        }}\n      >\n        <Menu\n          mode='inline'\n          defaultOpenKeys={['patient', 'study', 'clinical-trial', 'slides']}\n          style={{ height: '100%' }}\n          inlineIndent={14}\n        >\n          <Menu.SubMenu key='patient' title='Patient'>\n            <Patient metadata={refImage} />\n          </Menu.SubMenu>\n          <Menu.SubMenu key='study' title='Study'>\n            <Study metadata={refImage} />\n          </Menu.SubMenu>\n          {clinicalTrialMenu}\n          <Menu.SubMenu key='slides' title='Slides'>\n            <SlideList\n              clients={props.clients}\n              metadata={slides}\n              selectedSeriesInstanceUID={selectedSeriesInstanceUID}\n              onSeriesSelection={handleSeriesSelection}\n            />\n          </Menu.SubMenu>\n        </Menu>\n      </Layout.Sider>\n\n      <Routes>\n        <Route\n          path='/series/:seriesInstanceUID'\n          element={\n            <ParametrizedSlideViewer\n              clients={props.clients}\n              slides={slides}\n              preload={props.preload}\n              annotations={props.annotations}\n              enableAnnotationTools={props.enableAnnotationTools}\n              app={props.app}\n              user={props.user}\n            />\n          }\n        />\n      </Routes>\n    </Layout>\n  )\n}\n\nexport default withRouter(Viewer)\n","import dcmjs from 'dcmjs'\n\nconst { DicomMetaDictionary } = dcmjs.data\n\ninterface TagInfo {\n  tag: string\n  vr: string\n  keyword: string\n  value: string\n  children?: TagInfo[]\n  level: number\n}\n\nexport interface DicomTag {\n  name: string\n  vr: string\n  Value?: any[]\n  [key: string]: any\n}\n\nconst formatValue = (val: any): string => {\n  if (typeof val === 'object' && val !== null) {\n    return JSON.stringify(val)\n  }\n  return String(val)\n}\n\nexport const formatTagValue = (tag: DicomTag): string => {\n  if (tag.Value == null) return ''\n\n  if (Array.isArray(tag.Value)) {\n    return tag.Value.map(formatValue).join(', ')\n  }\n\n  return formatValue(tag.Value)\n}\n\n/**\n * Processes DICOM metadata and returns a flattened array of tag information\n * @param metadata - The DICOM metadata object to process\n * @param depth - The current depth level for nested sequences (default: 0)\n * @returns Array of processed tag information\n */\nexport function getRows (metadata: Record<string, any>, depth = 0): TagInfo[] {\n  if (metadata === undefined || metadata === null) return []\n  const keywords = Object.keys(metadata).filter(key => key !== '_vrMap')\n\n  return keywords.flatMap(keyword => {\n    // @ts-expect-error\n    const tagInfo = DicomMetaDictionary.nameMap[keyword] as TagInfo | undefined\n    let value = metadata[keyword]\n\n    // Handle private or unknown tags\n    if (tagInfo === undefined) {\n      const regex = /[0-9A-Fa-f]{6}/g\n      if (keyword.match(regex) == null) return []\n\n      return [{\n        tag: `(${keyword.substring(0, 4)},${keyword.substring(4, 8)})`,\n        vr: '',\n        keyword: 'Private Tag',\n        value: value?.toString() ?? '',\n        level: depth\n      }]\n    }\n\n    // Handle sequence values (SQ VR)\n    if (tagInfo.vr === 'SQ' && value !== undefined) {\n      const sequenceItems = Array.isArray(value) ? value : [value]\n\n      // Create a parent sequence node\n      const sequenceNode: TagInfo = {\n        tag: tagInfo.tag,\n        vr: tagInfo.vr,\n        keyword,\n        value: `Sequence with ${sequenceItems.length} item(s)`,\n        level: depth,\n        children: []\n      }\n\n      // Create individual nodes for each sequence item\n      sequenceNode.children = sequenceItems.map((item, index) => {\n        const itemNode: TagInfo = {\n          tag: `${tagInfo.tag}.${index + 1}`,\n          vr: 'Item',\n          keyword: `Item ${index + 1}`,\n          value: `Sequence Item ${index + 1}`,\n          level: depth + 1,\n          children: getRows(item, depth + 2)\n        }\n        return itemNode\n      })\n\n      return [sequenceNode]\n    }\n\n    // Handle array values\n    if (Array.isArray(value)) {\n      value = value.map(formatValue).join('\\\\')\n    } else if (typeof value === 'object' && value !== null) {\n      value = formatValue(value)\n    }\n\n    return [{\n      tag: tagInfo.tag,\n      vr: tagInfo.vr,\n      keyword: keyword.replace('RETIRED_', ''),\n      value: value?.toString() ?? '',\n      level: depth\n    }]\n  })\n}\n\n/**\n * Sorts DICOM tags alphabetically by tag value\n * @param metadata - The DICOM metadata object to process\n * @returns Sorted array of tag information\n */\nexport function getSortedTags (metadata: Record<string, any>): TagInfo[] {\n  const tagList = getRows(metadata)\n  return tagList.sort((a, b) => a.tag.localeCompare(b.tag))\n}\n","/**\n * Formats a DICOM datetime string (YYYYMMDD:HHmmss) into a human-readable format\n *\n * @param dateStr - DICOM datetime string in format \"YYYYMMDD:HHmmss\"\n * @returns Formatted date string (e.g., \"Mon, Jan 1 2024\")\n * @example\n * formatDicomDate(\"20240101:120000\") // Returns \"Mon, Jan 1 2024\"\n * formatDicomDate(\"invalid\") // Returns \"invalid\"\n */\nexport const formatDicomDate = (dateStr: string): string => {\n  // Parse YYYYMMDD:HHmmss format\n  const match = dateStr.match(/^(\\d{4})(\\d{2})(\\d{2}):(\\d{2})(\\d{2})(\\d{2})/)\n  if (match == null) return dateStr\n\n  const [, year, month, day, hour, minute, second] = match\n\n  // Validate month and day\n  const monthNum = parseInt(month)\n  const dayNum = parseInt(day)\n  if (monthNum < 1 || monthNum > 12 || dayNum < 1 || dayNum > 31) {\n    return dateStr\n  }\n\n  const date = new Date(\n    parseInt(year),\n    monthNum - 1, // months are 0-based\n    dayNum,\n    parseInt(hour),\n    parseInt(minute),\n    parseInt(second)\n  )\n\n  // Check if the date is invalid or if the month/day combination is invalid\n  // This catches cases like February 31st where the date rolls over to March\n  if (\n    date.getMonth() !== monthNum - 1 || // month rolled over\n    date.getDate() !== dayNum // day rolled over\n  ) {\n    return dateStr\n  }\n\n  // Format parts separately to avoid the extra comma\n  const weekday = date.toLocaleDateString('en-US', { weekday: 'short' })\n  const monthName = date.toLocaleDateString('en-US', { month: 'short' })\n  const dayFormatted = date.getDate()\n  const yearNum = date.getFullYear()\n\n  return `${weekday}, ${monthName} ${dayFormatted} ${yearNum}`\n}\n","import { v4 as generateUUID } from 'uuid'\n\n/**\n * Consumer must implement:\n * this.listeners = {}\n * this.EVENTS = { \"EVENT_KEY\": \"EVENT_VALUE\" }\n */\nconst pubSubInterface = {\n  subscribe,\n  _broadcastEvent,\n  _unsubscribe,\n  _isValidEvent\n}\n\nexport default pubSubInterface\n\n/**\n * Subscribe to updates.\n *\n * @param {string} eventName The name of the event\n * @param {Function} callback Events callback\n * @return {Object} Observable object with actions\n */\nfunction subscribe (this: PubSubService, eventName: string, callback: Function): { unsubscribe: () => any } {\n  if (this._isValidEvent(eventName)) {\n    const listenerId = generateUUID()\n    const subscription = { id: listenerId, callback }\n\n    // console.info(`Subscribing to '${eventName}'.`);\n    if (Array.isArray(this.listeners[eventName])) {\n      this.listeners[eventName].push(subscription)\n    } else {\n      this.listeners[eventName] = [subscription]\n    }\n\n    return {\n      unsubscribe: () => this._unsubscribe(eventName, listenerId)\n    }\n  } else {\n    throw new Error(`Event ${eventName} not supported.`)\n  }\n}\n\n/**\n * Unsubscribe to measurement updates.\n *\n * @param {string} eventName The name of the event\n * @param {string} listenerId The listeners id\n * @return void\n */\nfunction _unsubscribe (this: PubSubService, eventName: string, listenerId: string): void {\n  if (this.listeners[eventName] === undefined) {\n    return\n  }\n\n  const listeners = this.listeners[eventName]\n  if (Array.isArray(listeners)) {\n    this.listeners[eventName] = listeners.filter(({ id }) => id !== listenerId)\n  } else {\n    this.listeners[eventName] = []\n  }\n}\n\n/**\n * Check if a given event is valid.\n *\n * @param {string} eventName The name of the event\n * @return {boolean} Event name validation\n */\nfunction _isValidEvent (this: PubSubService, eventName: string): boolean {\n  return Object.values(this.EVENTS).includes(eventName)\n}\n\n/**\n * Broadcasts changes.\n *\n * @param {string} eventName - The event name\n * @param {func} callbackProps - Properties to pass callback\n * @return void\n */\nfunction _broadcastEvent (this: PubSubService, eventName: string, callbackProps: any): void {\n  const hasListeners = Object.keys(this.listeners).length > 0\n  const hasCallbacks = Array.isArray(this.listeners[eventName])\n\n  if (hasListeners && hasCallbacks) {\n    this.listeners[eventName].forEach((listener: { id: string, callback: Function }) => {\n      listener.callback(callbackProps)\n    })\n  }\n}\n\n/** Export a PubSubService class to be used instead of the individual items */\nexport class PubSubService {\n  EVENTS: any\n  subscribe: (\n    eventName: string,\n    callback: Function\n  ) => { unsubscribe: () => any }\n\n  _broadcastEvent: (eventName: string, callbackProps: any) => void\n  _unsubscribe: (eventName: string, listenerId: string) => void\n  _isValidEvent: (eventName: string) => boolean\n  listeners: { [key: string]: Array<{ id: string, callback: Function }> }\n  unsubscriptions: any[]\n  constructor (EVENTS: Record<string, string>) {\n    this.EVENTS = EVENTS\n    this.subscribe = subscribe\n    this._broadcastEvent = _broadcastEvent\n    this._unsubscribe = _unsubscribe\n    this._isValidEvent = _isValidEvent\n    this.listeners = {}\n    this.unsubscriptions = []\n  }\n\n  reset (): void {\n    this.unsubscriptions.forEach((unsub) => unsub())\n    this.unsubscriptions = []\n  }\n\n  /**\n   * Creates an event that records whether or not someone\n   * has consumed it.  Call eventData.consume() to consume the event.\n   * Check eventData.isConsumed to see if it is consumed or not.\n   * @param props - to include in the event\n   */\n  protected createConsumableEvent (props: Record<string, any>): Record<string, any> {\n    return {\n      ...props,\n      isConsumed: false,\n      consume: function Consume () {\n        this.isConsumed = true\n      }\n    }\n  }\n}\n","import { Instance, Series } from '../services/DICOMMetadataStore'\n\nfunction createSeriesMetadata (SeriesInstanceUID: string, defaultInstances?: Instance[]): Series {\n  const instances: Instance[] = []\n  const instancesMap = new Map<string, Instance>()\n\n  return {\n    SeriesInstanceUID,\n    Modality: '',\n    SeriesNumber: 0,\n    SeriesDescription: '',\n    SeriesDate: '',\n    SeriesTime: '',\n    ...defaultInstances?.[0],\n    instances,\n    addInstance: function (newInstance: Instance) {\n      this.addInstances([newInstance])\n    },\n    addInstances: function (newInstances: Instance[]) {\n      for (let i = 0, len = newInstances.length; i < len; i++) {\n        const instance = newInstances[i]\n\n        if (!instancesMap.has(instance.SOPInstanceUID)) {\n          instancesMap.set(instance.SOPInstanceUID, instance)\n          instances.push(instance)\n        }\n      }\n    },\n    getInstance: function (SOPInstanceUID: string) {\n      return instancesMap.get(SOPInstanceUID)\n    }\n  }\n}\n\nexport default createSeriesMetadata\n","import createSeriesMetadata from './createSeriesMetadata'\n\nimport { Study, Series, Instance } from '../services/DICOMMetadataStore'\n\nfunction createStudyMetadata (StudyInstanceUID: string): Study {\n  return {\n    StudyInstanceUID,\n    StudyDescription: '',\n    PatientID: '',\n    PatientName: '',\n    StudyDate: '',\n    AccessionNumber: '',\n    NumInstances: 0,\n    ModalitiesInStudy: [],\n    isLoaded: false,\n    series: [] as Series[],\n    /**\n     * @param {object} instance\n     */\n    addInstanceToSeries: function (instance: Instance) {\n      this.addInstancesToSeries([instance])\n    },\n    /**\n     * @param {object[]} instances\n     * @param {string} instances[].SeriesInstanceUID\n     * @param {string} instances[].StudyDescription\n     */\n    addInstancesToSeries: function (instances: Instance[]) {\n      const { SeriesInstanceUID } = instances[0]\n\n      if (this.StudyDescription !== '' && this.StudyDescription !== undefined) {\n        this.StudyDescription = instances[0].StudyDescription\n      }\n\n      let series = this.series.find(\n        (s) => s.SeriesInstanceUID === SeriesInstanceUID\n      )\n\n      if (series == null) {\n        series = createSeriesMetadata(SeriesInstanceUID, instances)\n        this.series.push(series)\n      }\n\n      series.addInstances(instances)\n    },\n\n    setSeriesMetadata: function (\n      SeriesInstanceUID: string,\n      seriesMetadata: any\n    ) {\n      let existingSeries = this.series.find(\n        (s) => s.SeriesInstanceUID === SeriesInstanceUID\n      )\n\n      if (existingSeries != null) {\n        existingSeries = Object.assign(existingSeries, seriesMetadata)\n      } else {\n        const series = createSeriesMetadata(SeriesInstanceUID)\n        this.series.push(Object.assign(series, seriesMetadata))\n      }\n    }\n  }\n}\n\nexport default createStudyMetadata\n","import dcmjs from 'dcmjs'\n\nimport pubSubServiceInterface from '../utils/pubSubServiceInterface'\nimport createStudyMetadata from '../utils/createStudyMetadata'\n\nexport const EVENTS = {\n  STUDY_ADDED: 'event::dicomMetadataStore:studyAdded',\n  INSTANCES_ADDED: 'event::dicomMetadataStore:instancesAdded',\n  SERIES_ADDED: 'event::dicomMetadataStore:seriesAdded',\n  SERIES_UPDATED: 'event::dicomMetadataStore:seriesUpdated'\n}\n\nexport interface Instance {\n  SOPInstanceUID: string\n  SOPClassUID: string\n  Rows: number\n  Columns: number\n  PatientSex: string\n  Modality: string\n  InstanceNumber: string\n  imageId?: string\n  [key: string]: any // For dynamic metadata properties\n}\n\nexport interface Series {\n  Modality: string\n  SeriesInstanceUID: string\n  SeriesNumber: number\n  SeriesDate: string\n  SeriesTime: string\n  SeriesDescription: string\n  instances: Instance[]\n  addInstance: (newInstance: Instance) => void\n  addInstances: (newInstances: Instance[]) => void\n  getInstance: (SOPInstanceUID: string) => Instance | undefined\n}\n\nexport interface Study {\n  StudyInstanceUID: string\n  StudyDescription: string\n  PatientID: string\n  PatientName: string\n  StudyDate: string\n  AccessionNumber: string\n  NumInstances: number\n  ModalitiesInStudy: any[]\n  NumberOfStudyRelatedSeries?: number\n  isLoaded: boolean\n  series: Series[]\n  addInstanceToSeries: (instance: Instance) => void\n  addInstancesToSeries: (instances: Instance[]) => void\n  setSeriesMetadata: (SeriesInstanceUID: string, metadata: any) => void\n}\n\ninterface Model {\n  studies: Study[]\n}\n\nconst _model: Model = {\n  studies: []\n}\n\nfunction _getStudyInstanceUIDs (): string[] {\n  return _model.studies.map((aStudy) => aStudy.StudyInstanceUID)\n}\n\nfunction _getStudy (StudyInstanceUID: string): Study | undefined {\n  return _model.studies.find(\n    (aStudy) => aStudy.StudyInstanceUID === StudyInstanceUID\n  )\n}\n\nfunction _getSeries (StudyInstanceUID: string, SeriesInstanceUID: string): Series | undefined {\n  const study = _getStudy(StudyInstanceUID)\n\n  if (study == null) {\n    return\n  }\n\n  return study.series.find(\n    (aSeries) => aSeries.SeriesInstanceUID === SeriesInstanceUID\n  )\n}\n\nfunction _getInstance (\n  StudyInstanceUID: string,\n  SeriesInstanceUID: string,\n  SOPInstanceUID: string\n): Instance | undefined {\n  const series = _getSeries(StudyInstanceUID, SeriesInstanceUID)\n\n  if (series == null) {\n    return\n  }\n\n  return series.getInstance(SOPInstanceUID)\n}\n\nfunction _getInstanceByImageId (imageId: string): Instance | undefined {\n  for (const study of _model.studies) {\n    for (const series of study.series) {\n      for (const instance of series.instances) {\n        if (instance.imageId === imageId) {\n          return instance\n        }\n      }\n    }\n  }\n}\n\n/**\n * Update the metadata of a specific series\n * @param {*} StudyInstanceUID\n * @param {*} SeriesInstanceUID\n * @param {*} metadata metadata inform of key value pairs\n * @returns\n */\nfunction _updateMetadataForSeries (\n  StudyInstanceUID: string,\n  SeriesInstanceUID: string,\n  metadata: Record<string, any>\n): void {\n  const study = _getStudy(StudyInstanceUID)\n\n  if (study == null) {\n    return\n  }\n\n  const series = study.series.find(\n    (aSeries) => aSeries.SeriesInstanceUID === SeriesInstanceUID\n  )\n\n  if (series == null) {\n    return\n  }\n\n  const { instances } = series\n  instances.forEach((instance) => {\n    Object.keys(metadata).forEach((key) => {\n      if (typeof metadata[key] === 'object') {\n        instance[key] = { ...instance[key], ...metadata[key] }\n      } else {\n        instance[key] = metadata[key]\n      }\n    })\n  })\n}\n\ninterface BaseImplementationType {\n  EVENTS: typeof EVENTS\n  listeners: Record<string, any>\n  addInstance: (dicomJSONDatasetOrP10ArrayBuffer: ArrayBuffer | Record<string, any>) => void\n  addInstances: (instances: Instance[], madeInClient?: boolean) => void\n  updateSeriesMetadata: (seriesMetadata: Record<string, any>) => void\n  addSeriesMetadata: (seriesSummaryMetadata: Array<Record<string, any>>, madeInClient?: boolean) => void\n  addStudy: (study: Record<string, any>) => void\n  getStudyInstanceUIDs: typeof _getStudyInstanceUIDs\n  getStudy: typeof _getStudy\n  getSeries: typeof _getSeries\n  getInstance: typeof _getInstance\n  getInstanceByImageId: typeof _getInstanceByImageId\n  updateMetadataForSeries: typeof _updateMetadataForSeries\n  _broadcastEvent: (eventName: string, data: any) => void\n}\n\nconst BaseImplementation: BaseImplementationType = {\n  EVENTS,\n  listeners: {},\n  addInstance (dicomJSONDatasetOrP10ArrayBuffer) {\n    let dicomJSONDataset\n\n    // If Arraybuffer, parse to DICOMJSON before naturalizing.\n    if (dicomJSONDatasetOrP10ArrayBuffer instanceof ArrayBuffer) {\n      const dicomData = dcmjs.data.DicomMessage.readFile(\n        dicomJSONDatasetOrP10ArrayBuffer\n      )\n\n      dicomJSONDataset = dicomData.dict\n    } else {\n      dicomJSONDataset = dicomJSONDatasetOrP10ArrayBuffer\n    }\n\n    let naturalizedDataset: Instance\n\n    if (!('SeriesInstanceUID' in dicomJSONDataset)) {\n      naturalizedDataset =\n        dcmjs.data.DicomMetaDictionary.naturalizeDataset(dicomJSONDataset) as Instance\n    } else {\n      naturalizedDataset = dicomJSONDataset as unknown as Instance\n    }\n\n    const { StudyInstanceUID } = naturalizedDataset\n\n    let study = _model.studies.find(\n      (study) => study.StudyInstanceUID === StudyInstanceUID\n    )\n\n    if (study == null) {\n      _model.studies.push(createStudyMetadata(StudyInstanceUID))\n      study = _model.studies[_model.studies.length - 1]\n    }\n\n    study.addInstanceToSeries(naturalizedDataset)\n  },\n  addInstances (instances, madeInClient = false) {\n    const { StudyInstanceUID, SeriesInstanceUID } = instances[0]\n\n    let study = _model.studies.find(\n      (study) => study.StudyInstanceUID === StudyInstanceUID\n    )\n\n    if (study == null) {\n      _model.studies.push(createStudyMetadata(StudyInstanceUID))\n      study = _model.studies[_model.studies.length - 1]\n    }\n\n    study.addInstancesToSeries(instances)\n\n    // Broadcast an event even if we used cached data.\n    // This is because the mode needs to listen to instances that are added to build up its active displaySets.\n    // It will see there are cached displaySets and end early if this Series has already been fired in this\n    // Mode session for some reason.\n    this._broadcastEvent(EVENTS.INSTANCES_ADDED, {\n      StudyInstanceUID,\n      SeriesInstanceUID,\n      madeInClient\n    })\n  },\n  updateSeriesMetadata (seriesMetadata) {\n    const { StudyInstanceUID, SeriesInstanceUID } = seriesMetadata\n    const series = _getSeries(StudyInstanceUID, SeriesInstanceUID)\n    if (series == null) {\n      return\n    }\n\n    const study = _getStudy(StudyInstanceUID)\n    if (study != null) {\n      study.setSeriesMetadata(SeriesInstanceUID, seriesMetadata)\n    }\n  },\n  addSeriesMetadata (seriesSummaryMetadata, madeInClient = false) {\n    if (\n      seriesSummaryMetadata === undefined ||\n      seriesSummaryMetadata.length === 0 ||\n      seriesSummaryMetadata[0] === undefined\n    ) {\n      return\n    }\n\n    const { StudyInstanceUID } = seriesSummaryMetadata[0]\n    let study = _getStudy(StudyInstanceUID)\n    if (study == null) {\n      study = createStudyMetadata(StudyInstanceUID)\n      // Will typically be undefined with a compliant DICOMweb server, reset later\n      study.StudyDescription = seriesSummaryMetadata[0].StudyDescription\n      seriesSummaryMetadata?.forEach((item) => {\n        if (study !== undefined && !study.ModalitiesInStudy?.includes(item.Modality)) {\n          study.ModalitiesInStudy?.push(item.Modality)\n        }\n      })\n      study.NumberOfStudyRelatedSeries = seriesSummaryMetadata.length\n      _model.studies.push(study)\n    }\n\n    seriesSummaryMetadata.forEach((series) => {\n      const { SeriesInstanceUID } = series\n      study?.setSeriesMetadata(SeriesInstanceUID, series)\n    })\n\n    this._broadcastEvent(EVENTS.SERIES_ADDED, {\n      StudyInstanceUID,\n      seriesSummaryMetadata,\n      madeInClient\n    })\n  },\n  addStudy (study) {\n    const { StudyInstanceUID } = study\n\n    const existingStudy = _model.studies.find(\n      (study) => study.StudyInstanceUID === StudyInstanceUID\n    )\n\n    if (existingStudy == null) {\n      const newStudy = createStudyMetadata(StudyInstanceUID)\n\n      newStudy.PatientID = study.PatientID\n      newStudy.PatientName = study.PatientName\n      newStudy.StudyDate = study.StudyDate\n      newStudy.ModalitiesInStudy = study.ModalitiesInStudy\n      newStudy.StudyDescription = study.StudyDescription\n      newStudy.AccessionNumber = study.AccessionNumber\n      newStudy.NumInstances = study.NumInstances // todo: Correct naming?\n\n      _model.studies.push(newStudy)\n    }\n  },\n  getStudyInstanceUIDs: _getStudyInstanceUIDs,\n  getStudy: _getStudy,\n  getSeries: _getSeries,\n  getInstance: _getInstance,\n  getInstanceByImageId: _getInstanceByImageId,\n  updateMetadataForSeries: _updateMetadataForSeries,\n  _broadcastEvent (eventName: string, data: any): void {\n  }\n}\n\ninterface DicomMetadataStoreType extends BaseImplementationType {\n  subscribe: (event: string, callback: (data: any) => void) => { unsubscribe: () => any }\n  unsubscribe: (event: string, callback: (data: any) => void) => void\n}\n\nconst DicomMetadataStore = Object.assign(\n  {},\n  BaseImplementation,\n  pubSubServiceInterface\n) as unknown as DicomMetadataStoreType\n\nexport { DicomMetadataStore }\nexport default DicomMetadataStore\n","import { useState, useEffect } from 'react'\n\n/**\n * A hook that delays updating a value for the specified time\n * @param value The value to debounce\n * @param delay The delay time in milliseconds\n * @returns The debounced value\n * @example\n * const debouncedSearchTerm = useDebounce(searchTerm, 300)\n */\nexport const useDebounce = <T,>(value: T, delay: number): T => {\n  const [debouncedValue, setDebouncedValue] = useState<T>(value)\n\n  useEffect(() => {\n    const timer = setTimeout(() => {\n      setDebouncedValue(value)\n    }, delay)\n\n    return () => {\n      clearTimeout(timer)\n    }\n  }, [value, delay])\n\n  return debouncedValue\n}\n","import { useState, useMemo, useEffect } from 'react'\nimport { Select, Input, Slider, Typography, Table } from 'antd'\nimport { SearchOutlined } from '@ant-design/icons'\n\nimport DicomWebManager from '../../DicomWebManager'\nimport './DicomTagBrowser.css'\nimport { useSlides } from '../../hooks/useSlides'\nimport { getSortedTags } from './dicomTagUtils'\nimport { formatDicomDate } from '../../utils/formatDicomDate'\nimport DicomMetadataStore, { Series, Study } from '../../services/DICOMMetadataStore'\nimport { useDebounce } from '../../hooks/useDebounce'\n\nconst { Option } = Select\n\ninterface DisplaySet {\n  displaySetInstanceUID: number\n  SeriesDate?: string\n  SeriesTime?: string\n  SeriesNumber: string\n  SeriesDescription?: string\n  Modality: string\n  images: any[]\n}\n\ninterface TableDataItem {\n  key: string\n  tag: string\n  vr: string\n  keyword: string\n  value: string\n  children?: TableDataItem[]\n}\n\ninterface DicomTagBrowserProps {\n  clients: { [key: string]: DicomWebManager }\n  studyInstanceUID: string\n}\n\nconst DicomTagBrowser = ({ clients, studyInstanceUID }: DicomTagBrowserProps): JSX.Element => {\n  const { slides, isLoading } = useSlides({ clients, studyInstanceUID })\n  const [study, setStudy] = useState<Study | undefined>(undefined)\n\n  const [displaySets, setDisplaySets] = useState<DisplaySet[]>([])\n  const [selectedDisplaySetInstanceUID, setSelectedDisplaySetInstanceUID] = useState(0)\n  const [instanceNumber, setInstanceNumber] = useState(1)\n  const [filterValue, setFilterValue] = useState('')\n  const [expandedKeys, setExpandedKeys] = useState<string[]>([])\n  const [searchInput, setSearchInput] = useState('')\n\n  const debouncedSearchValue = useDebounce(searchInput, 300)\n\n  useEffect(() => {\n    setFilterValue(debouncedSearchValue)\n  }, [debouncedSearchValue])\n\n  useEffect(() => {\n    const handler = (event: any): void => {\n      const study: Study | undefined = Object.assign({}, DicomMetadataStore.getStudy(studyInstanceUID))\n      setStudy(study)\n    }\n    const seriesAddedSubscription = DicomMetadataStore.subscribe(DicomMetadataStore.EVENTS.SERIES_ADDED, handler)\n    const instancesAddedSubscription = DicomMetadataStore.subscribe(DicomMetadataStore.EVENTS.INSTANCES_ADDED, handler)\n\n    const study = Object.assign({}, DicomMetadataStore.getStudy(studyInstanceUID))\n    setStudy(study)\n\n    return () => {\n      seriesAddedSubscription.unsubscribe()\n      instancesAddedSubscription.unsubscribe()\n    }\n  }, [studyInstanceUID])\n\n  useEffect(() => {\n    let displaySets: DisplaySet[] = []\n    let derivedDisplaySets: DisplaySet[] = []\n    const processedSeries: string[] = []\n    let index = 0\n\n    if (slides.length > 0) {\n      displaySets = slides\n        .map((slide): DisplaySet | null => {\n          const { volumeImages } = slide\n          if (volumeImages?.[0] === undefined) return null\n\n          const {\n            SeriesDate,\n            SeriesTime,\n            SeriesNumber,\n            SeriesInstanceUID,\n            SeriesDescription,\n            Modality\n          } = volumeImages[0]\n\n          processedSeries.push(SeriesInstanceUID)\n\n          const ds: DisplaySet = {\n            displaySetInstanceUID: index,\n            SeriesDate,\n            SeriesTime,\n            SeriesInstanceUID,\n            // @ts-expect-error\n            SeriesNumber,\n            SeriesDescription,\n            Modality,\n            images: volumeImages\n          }\n          index++\n          return ds\n        })\n        .filter((set): set is DisplaySet => set !== null)\n    }\n\n    if (study !== undefined && study.series?.length > 0) {\n      derivedDisplaySets = study.series.filter(s => !processedSeries.includes(s.SeriesInstanceUID))\n        .map((series: Series): DisplaySet => {\n          const ds: DisplaySet = {\n            displaySetInstanceUID: index,\n            SeriesDate: series.SeriesDate,\n            SeriesTime: series.SeriesTime,\n            // @ts-expect-error\n            SeriesNumber: series.SeriesNumber,\n            SeriesDescription: series.SeriesDescription,\n            SeriesInstanceUID: series.SeriesInstanceUID,\n            Modality: series.Modality,\n            images: series?.instances?.length > 0 ? series.instances : [series]\n          }\n          index++\n          return ds\n        })\n    }\n\n    setDisplaySets([...displaySets, ...derivedDisplaySets])\n  }, [slides, study])\n\n  const displaySetList = useMemo(() => {\n    displaySets.sort((a, b) => Number(a.SeriesNumber) - Number(b.SeriesNumber))\n    return displaySets.map((displaySet, index) => {\n      const {\n        SeriesDate = '',\n        SeriesTime = '',\n        SeriesNumber = '',\n        SeriesDescription = '',\n        Modality = ''\n      } = displaySet\n\n      const dateStr = `${SeriesDate}:${SeriesTime}`.split('.')[0]\n      const displayDate = formatDicomDate(dateStr)\n\n      return {\n        value: index,\n        label: `${SeriesNumber} (${Modality}): ${SeriesDescription}`,\n        description: displayDate\n      }\n    })\n  }, [displaySets])\n\n  const showInstanceList =\n    displaySets[selectedDisplaySetInstanceUID]?.images.length > 1\n\n  console.debug('displaySets:', displaySets)\n\n  const instanceSliderMarks = useMemo(() => {\n    if (displaySets[selectedDisplaySetInstanceUID] === undefined) return {}\n    const totalInstances = displaySets[selectedDisplaySetInstanceUID].images.length\n\n    // Create marks for first, middle, and last instances\n    const marks: Record<number, string> = {\n      1: '1', // First\n      [Math.ceil(totalInstances / 2)]: String(Math.ceil(totalInstances / 2)), // Middle\n      [totalInstances]: String(totalInstances) // Last\n    }\n\n    return marks\n  }, [selectedDisplaySetInstanceUID, displaySets])\n\n  const columns = [\n    {\n      title: 'Tag',\n      dataIndex: 'tag',\n      key: 'tag',\n      width: '30%'\n    },\n    {\n      title: 'VR',\n      dataIndex: 'vr',\n      key: 'vr',\n      width: '5%'\n    },\n    {\n      title: 'Keyword',\n      dataIndex: 'keyword',\n      key: 'keyword',\n      width: '30%'\n    },\n    {\n      title: 'Value',\n      dataIndex: 'value',\n      key: 'value',\n      width: '40%'\n    }\n  ]\n\n  const tableData = useMemo(() => {\n    const transformTagsToTableData = (tags: any[], parentKey = ''): TableDataItem[] => {\n      return tags.map((tag, index) => {\n        // Create a unique key using tag value if available, otherwise use index\n        const keyBase: string = tag.tag !== '' ? tag.tag.replace(/[(),]/g, '') : index.toString()\n        const currentKey: string = parentKey !== '' ? `${parentKey}-${keyBase}` : keyBase\n\n        const item: TableDataItem = {\n          key: currentKey,\n          tag: tag.tag,\n          vr: tag.vr,\n          keyword: tag.keyword,\n          value: tag.value\n        }\n\n        if (tag.children !== undefined && tag.children.length > 0) {\n          item.children = transformTagsToTableData(tag.children, currentKey)\n        }\n\n        return item\n      })\n    }\n\n    if (displaySets[selectedDisplaySetInstanceUID] === undefined) return []\n    const metadata = displaySets[selectedDisplaySetInstanceUID]?.images[instanceNumber - 1]\n    const tags = getSortedTags(metadata)\n    return transformTagsToTableData(tags)\n  }, [instanceNumber, selectedDisplaySetInstanceUID, displaySets])\n\n  // Reset expanded keys when search value changes\n  useEffect(() => {\n    setExpandedKeys([])\n  }, [filterValue])\n\n  const filteredData = useMemo(() => {\n    if (filterValue === undefined || filterValue === '') return tableData\n\n    const searchLower = filterValue.toLowerCase()\n\n    const nodeMatches = (node: TableDataItem): boolean => {\n      return (\n        (node.tag?.toLowerCase() ?? '').includes(searchLower) ||\n        (node.vr?.toLowerCase() ?? '').includes(searchLower) ||\n        (node.keyword?.toLowerCase() ?? '').includes(searchLower) ||\n        (node.value?.toString().toLowerCase() ?? '').includes(searchLower)\n      )\n    }\n\n    const findMatchingNodes = (nodes: TableDataItem[]): TableDataItem[] => {\n      const results: TableDataItem[] = []\n\n      const searchNode = (node: TableDataItem): void => {\n        if (nodeMatches(node)) {\n          // Create a new matching node with its original structure\n          const matchingNode: TableDataItem = {\n            key: node.key,\n            tag: node.tag,\n            vr: node.vr,\n            keyword: node.keyword,\n            value: node.value\n          }\n\n          // If the node has children, preserve them for expansion\n          matchingNode.children = node?.children?.map((child): TableDataItem => ({\n            key: child.key,\n            tag: child.tag,\n            vr: child.vr,\n            keyword: child.keyword,\n            value: child.value,\n            children: child.children\n          }))\n\n          results.push(matchingNode)\n        }\n\n        // Continue searching through children\n        node?.children?.forEach(searchNode)\n      }\n\n      nodes.forEach(searchNode)\n      return results\n    }\n\n    return findMatchingNodes(tableData)\n  }, [tableData, filterValue])\n\n  if (isLoading) {\n    return <div>Loading...</div>\n  }\n\n  return (\n    <div className='dicom-tag-browser'>\n      <div\n        style={{\n          width: '100%',\n          padding: '16px 20px 20px'\n        }}\n      >\n        <div style={{ display: 'flex', gap: '24px', marginBottom: '32px' }}>\n          <div style={{ flex: 1 }}>\n            <Typography.Text strong style={{ display: 'block', marginBottom: '8px' }}>Slides</Typography.Text>\n            <Select\n              style={{ width: '100%' }}\n              value={selectedDisplaySetInstanceUID}\n              onChange={(value) => {\n                setSelectedDisplaySetInstanceUID(value)\n                setInstanceNumber(1)\n              }}\n              optionLabelProp='label'\n              optionFilterProp='label'\n            >\n              {displaySetList.map((item) => (\n                <Option key={item.value} value={item.value} label={item.label}>\n                  <div>\n                    <div>{item.label}</div>\n                    <div\n                      style={{ fontSize: '12px', color: 'rgba(0, 0, 0, 0.45)' }}\n                    >\n                      {item.description}\n                    </div>\n                  </div>\n                </Option>\n              ))}\n            </Select>\n          </div>\n\n          {showInstanceList && (\n            <div style={{ flex: 1 }}>\n              <Typography.Text strong style={{ display: 'block', marginBottom: '8px' }}>\n                Instance Number: {instanceNumber}\n              </Typography.Text>\n              <Slider\n                min={1}\n                max={displaySets[selectedDisplaySetInstanceUID]?.images.length}\n                value={instanceNumber}\n                onChange={(value) => setInstanceNumber(value)}\n                marks={instanceSliderMarks}\n                tooltip={{\n                  formatter: (value: number | undefined) => value !== undefined ? `Instance ${value}` : ''\n                }}\n              />\n            </div>\n          )}\n        </div>\n\n        <Input\n          style={{ marginBottom: '20px' }}\n          placeholder='Search DICOM tags...'\n          prefix={<SearchOutlined />}\n          onChange={(e) => setSearchInput(e.target.value)}\n          value={searchInput}\n        />\n\n        <Table\n          columns={columns}\n          dataSource={filteredData}\n          pagination={false}\n          expandable={{\n            expandedRowKeys: expandedKeys,\n            onExpandedRowsChange: (keys) => setExpandedKeys(keys as string[])\n          }}\n          size='small'\n          scroll={{ y: 500 }}\n        />\n      </div>\n    </div>\n  )\n}\n\nexport default DicomTagBrowser\n","import React from 'react'\nimport { NavLink } from 'react-router-dom'\nimport {\n  Col,\n  Descriptions,\n  Dropdown,\n  Input,\n  Layout,\n  Modal,\n  Row,\n  Space,\n  Badge,\n  Collapse\n} from 'antd'\nimport {\n  ApiOutlined,\n  CheckOutlined,\n  InfoOutlined,\n  StopOutlined,\n  FileSearchOutlined,\n  UnorderedListOutlined,\n  UserOutlined,\n  SettingOutlined\n} from '@ant-design/icons'\nimport { detect } from 'detect-browser'\n\nimport Button from './Button'\nimport { RouteComponentProps, withRouter } from '../utils/router'\nimport NotificationMiddleware, { NotificationMiddlewareEvents } from '../services/NotificationMiddleware'\nimport { CustomError } from '../utils/CustomError'\nimport { v4 as uuidv4 } from 'uuid'\nimport DicomTagBrowser from './DicomTagBrowser/DicomTagBrowser'\nimport DicomWebManager from '../DicomWebManager'\n\ninterface HeaderProps extends RouteComponentProps {\n  app: {\n    name: string\n    version: string\n    homepage: string\n    uid: string\n    organization?: string\n  }\n  user?: {\n    name: string\n    email: string\n  }\n  clients: { [key: string]: DicomWebManager }\n  showWorklistButton: boolean\n  onServerSelection: ({ url }: { url: string }) => void\n  onUserLogout?: () => void\n  showServerSelectionButton: boolean\n}\n\ninterface ExtendedCustomError extends CustomError {\n  source: string\n}\n\ninterface HeaderState {\n  selectedServerUrl?: string\n  isServerSelectionModalVisible: boolean\n  isServerSelectionDisabled: boolean\n  errorObj: ExtendedCustomError[]\n  errorCategory: string[]\n  warnings: string[]\n}\n\n/**\n * React component for the application header.\n */\nclass Header extends React.Component<HeaderProps, HeaderState> {\n  constructor (props: HeaderProps) {\n    super(props)\n    this.state = {\n      isServerSelectionModalVisible: false,\n      isServerSelectionDisabled: true,\n      errorObj: [],\n      errorCategory: [],\n      warnings: []\n    }\n\n    const onErrorHandler = ({ source, error }: {\n      source: string\n      error: CustomError\n    }): void => {\n      this.setState(state => ({\n        ...state,\n        errorObj: [...state.errorObj, { ...error, source }],\n        errorCategory: [...state.errorCategory, error.type]\n      }))\n    }\n\n    const onWarningHandler = (warning: string): void => {\n      this.setState(state => ({\n        ...state,\n        warnings: [...state.warnings, warning]\n      }))\n    }\n\n    NotificationMiddleware.subscribe(\n      NotificationMiddlewareEvents.OnError,\n      onErrorHandler\n    )\n\n    NotificationMiddleware.subscribe(\n      NotificationMiddlewareEvents.OnWarning,\n      onWarningHandler\n    )\n  }\n\n  componentDidUpdate (prevProps: Readonly<HeaderProps>, prevState: Readonly<HeaderState>): void {\n    if (((prevState.warnings.length > 0) || (prevState.errorObj.length > 0)) && this.props.location.pathname !== prevProps.location.pathname) {\n      this.setState({\n        isServerSelectionModalVisible: false,\n        isServerSelectionDisabled: true,\n        errorObj: [],\n        errorCategory: [],\n        warnings: []\n      })\n    }\n  }\n\n  handleInfoButtonClick = (): void => {\n    const browser = detect()\n    const environment: {\n      browser: {\n        name?: string\n        version?: string\n      }\n      os: {\n        name?: string\n      }\n    } = {\n      browser: {},\n      os: {}\n    }\n    if (browser != null) {\n      environment.browser = {\n        name: browser.name != null ? browser.name : undefined,\n        version: browser.version != null ? browser.version : undefined\n      }\n      environment.os = {\n        name: browser.os != null ? browser.os : undefined\n      }\n    }\n\n    Modal.info({\n      title: 'About',\n      width: 600,\n      content: (\n        <>\n          <Descriptions title='Application' column={1}>\n            <Descriptions.Item label='Name'>\n              {this.props.app.name}\n            </Descriptions.Item>\n            <Descriptions.Item label='Version'>\n              {this.props.app.version}\n            </Descriptions.Item>\n            <Descriptions.Item label='Homepage'>\n              {this.props.app.homepage}\n            </Descriptions.Item>\n          </Descriptions>\n          <Descriptions title='Browser' column={1}>\n            <Descriptions.Item label='Name'>\n              {environment.browser.name}\n            </Descriptions.Item>\n            <Descriptions.Item label='Version'>\n              {environment.browser.version}\n            </Descriptions.Item>\n          </Descriptions>\n          <Descriptions title='Operating System' column={1}>\n            <Descriptions.Item label='Name'>\n              {environment.os.name}\n            </Descriptions.Item>\n          </Descriptions>\n        </>\n      ),\n      onOk (): void {}\n    })\n  }\n\n  handleDicomTagBrowserButtonClick = (): void => {\n    const width = window.innerWidth - 200\n    Modal.info({\n      title: 'DICOM Tag Browser',\n      width,\n      content: <DicomTagBrowser\n        clients={this.props.clients}\n        studyInstanceUID={this.props.params.studyInstanceUID ?? ''}\n               />,\n      onOk (): void {}\n    })\n  }\n\n  handleDebugButtonClick = (): void => {\n    const errorMsgs: {\n      Authentication: string[]\n      Communication: string[]\n      EncodingDecoding: string[]\n      Visualization: string[]\n    } = {\n      Authentication: [],\n      Communication: [],\n      EncodingDecoding: [],\n      Visualization: []\n    }\n\n    type ObjectKey = keyof typeof errorMsgs\n    const errorNum = this.state.errorObj.length\n\n    if (errorNum > 0) {\n      for (let i = 0; i < errorNum; i++) {\n        const category = this.state.errorCategory[i] as ObjectKey\n        errorMsgs[category].push(`${this.state.errorObj[i].message as string} (Source: ${this.state.errorObj[i].source})`)\n      }\n    }\n\n    const { Panel } = Collapse\n\n    const showErrorCount = (errcount: number): JSX.Element => (\n      <Badge count={errcount} />\n    )\n\n    const showWarningCount = (warncount: number): JSX.Element => (\n      <Badge color='green' count={warncount} />\n    )\n\n    Modal.info({\n      title: 'Debug Information\\n (Check console for more information)',\n      width: 800,\n      content: (\n        <Collapse>\n          <Panel\n            header='Communication Error'\n            key='communicationerror'\n            extra={showErrorCount(errorMsgs.Communication.length)}\n          >\n            <ol>\n              {errorMsgs.Communication.map(e => (\n                <li key={uuidv4()}>{e}</li>\n              ))}\n            </ol>\n          </Panel>\n          <Panel\n            header='Data Encoding/Decoding error'\n            key='encodedecodeerror'\n            extra={showErrorCount(errorMsgs.EncodingDecoding.length)}\n          >\n            <ol>\n              {errorMsgs.EncodingDecoding.map(e => (\n                <li key={uuidv4()}>{e}</li>\n              ))}\n            </ol>\n          </Panel>\n          <Panel\n            header='Visualization error'\n            key='visualizationerror'\n            extra={showErrorCount(errorMsgs.Visualization.length)}\n          >\n            <ol>\n              {errorMsgs.Visualization.map(e => (\n                <li key={uuidv4()}>{e}</li>\n              ))}\n            </ol>\n          </Panel>\n          <Panel\n            header='Authentication error'\n            key='autherror'\n            extra={showErrorCount(errorMsgs.Authentication.length)}\n          >\n            <ol>\n              {errorMsgs.Authentication.map(e => (\n                <li key={uuidv4()}>{e}</li>\n              ))}\n            </ol>\n          </Panel>\n          <Panel\n            header='Warning'\n            key='warning'\n            extra={showWarningCount(this.state.warnings.length)}\n          >\n            <ol>\n              {this.state.warnings.map(warning => (\n                <li key={uuidv4()}>{warning}</li>\n              ))}\n            </ol>\n          </Panel>\n        </Collapse>\n      ),\n      onOk (): void {}\n    })\n  }\n\n  handleServerSelectionButtonClick = (): void => {\n    this.setState({ isServerSelectionModalVisible: true })\n  }\n\n  render (): React.ReactNode {\n    let user = null\n    if (this.props.user !== undefined) {\n      const userMenuItems = []\n      if (this.props.onUserLogout !== undefined) {\n        userMenuItems.push(\n          {\n            label: 'Logout',\n            key: 'user-logout',\n            onClick: () => {\n              if (this.props.onUserLogout !== undefined) {\n                this.props.onUserLogout()\n              }\n            }\n          }\n        )\n      }\n      const userMenu = { items: userMenuItems }\n      user = (\n        <Dropdown menu={userMenu} trigger={['click']}>\n          <Button\n            icon={UserOutlined}\n            onClick={e => e.preventDefault()}\n            label={`${this.props.user.name} (${this.props.user.email})`}\n          />\n        </Dropdown>\n      )\n    }\n\n    let worklistButton\n    if (this.props.showWorklistButton) {\n      worklistButton = (\n        <NavLink to='/'>\n          <Button icon={UnorderedListOutlined} tooltip='Go to worklist' />\n        </NavLink>\n      )\n    }\n\n    const infoButton = (\n      <Button\n        icon={InfoOutlined}\n        tooltip='Get app info'\n        onClick={this.handleInfoButtonClick}\n      />\n    )\n\n    const debugButton = (\n      <Badge count={this.state.errorObj.length}>\n        <Badge color='green' count={this.state.warnings.length}>\n          <Button\n            icon={SettingOutlined}\n            tooltip='Debug info'\n            onClick={this.handleDebugButtonClick}\n          />\n        </Badge>\n      </Badge>\n    )\n\n    const showDicomTagBrowser = this.props.location.pathname.includes('/studies/')\n\n    const dicomTagBrowserButton = showDicomTagBrowser\n      ? (\n        <Button\n          icon={FileSearchOutlined}\n          tooltip='Dicom Tag Browser'\n          onClick={this.handleDicomTagBrowserButtonClick}\n        />\n        )\n      : null\n\n    let serverSelectionButton\n    if (this.props.showServerSelectionButton) {\n      serverSelectionButton = (\n        <Button\n          icon={ApiOutlined}\n          tooltip='Select server'\n          onClick={this.handleServerSelectionButtonClick}\n        />\n      )\n    }\n\n    const handleServerSelectionInput = (\n      event: React.FormEvent<HTMLInputElement>\n    ): void => {\n      const value = event.currentTarget.value\n      let isDisabled = true\n      if (value != null) {\n        try {\n          const url = new URL(value)\n          if (url.protocol.startsWith('http') && url.pathname.length > 0) {\n            isDisabled = false\n          }\n        } catch (TypeError) {}\n      }\n      this.setState({\n        selectedServerUrl: value,\n        isServerSelectionDisabled: isDisabled\n      })\n    }\n\n    const handleServerSelectionCancellation = (): void => {\n      this.setState({\n        selectedServerUrl: undefined,\n        isServerSelectionModalVisible: false,\n        isServerSelectionDisabled: true\n      })\n    }\n\n    const handleServerSelection = (): void => {\n      const url = this.state.selectedServerUrl\n      let closeModal = false\n      if (url != null && url !== '') {\n        if (url.startsWith('http://') || url.startsWith('https://')) {\n          this.props.onServerSelection({ url })\n          closeModal = true\n        }\n      }\n      this.setState({\n        selectedServerUrl: undefined,\n        isServerSelectionModalVisible: !closeModal,\n        isServerSelectionDisabled: true\n      })\n    }\n\n    const logoUrl = process.env.PUBLIC_URL + '/logo.svg'\n\n    return (\n      <>\n        <Layout.Header style={{ width: '100%', padding: '0 14px' }}>\n          <Row>\n            <Col>\n              <Space align='center' direction='horizontal'>\n                <img\n                  src={logoUrl}\n                  alt=''\n                  style={{ height: '64px', margin: '-14px' }}\n                />\n              </Space>\n            </Col>\n            <Col flex='auto' />\n            <Col>\n              <Space direction='horizontal'>\n                {worklistButton}\n                {infoButton}\n                {debugButton}\n                {dicomTagBrowserButton}\n                {serverSelectionButton}\n                {user}\n              </Space>\n            </Col>\n          </Row>\n        </Layout.Header>\n\n        <Modal\n          open={this.state.isServerSelectionModalVisible}\n          title='Select DICOMweb server'\n          onOk={handleServerSelection}\n          onCancel={handleServerSelectionCancellation}\n        >\n          <Input\n            placeholder='Enter base URL of DICOMweb Study Service'\n            onChange={handleServerSelectionInput}\n            onPressEnter={handleServerSelection}\n            addonAfter={\n              this.state.isServerSelectionDisabled\n                ? <StopOutlined style={{ color: 'rgba(0,0,0,.45)' }} />\n                : <CheckOutlined style={{ color: 'rgba(0,0,0,.45)' }} />\n            }\n          />\n        </Modal>\n      </>\n    )\n  }\n}\n\nexport default withRouter(Header)\n","import React from 'react'\nimport { Result } from 'antd'\n\ninterface InfoPageProps {\n  type: string\n  title?: string\n  message?: string\n}\n\nconst InfoPage = ({ title, message }: InfoPageProps): JSX.Element => {\n  return (\n    <div style={{\n      height: '100vh',\n      display: 'flex',\n      alignItems: 'center',\n      justifyContent: 'center'\n    }}\n    >\n      <Result\n        title={title}\n        subTitle={message}\n      />\n    </div>\n  )\n}\n\nexport default InfoPage\n","import React from 'react'\nimport { Button, Input, Space, Table, TablePaginationConfig } from 'antd'\nimport { ColumnsType } from 'antd/es/table'\nimport { FilterConfirmProps } from 'antd/es/table/interface'\nimport { SearchOutlined } from '@ant-design/icons'\nimport DicomWebManager from '../DicomWebManager'\n\nimport * as dmv from 'dicom-microscopy-viewer'\n\nimport { StorageClasses } from '../data/uids'\nimport { withRouter, RouteComponentProps } from '../utils/router'\nimport { parseDate, parseName, parseSex, parseTime } from '../utils/values'\nimport { CustomError, errorTypes } from '../utils/CustomError'\nimport NotificationMiddleware, {\n  NotificationMiddlewareContext\n} from '../services/NotificationMiddleware'\n\ninterface WorklistProps extends RouteComponentProps {\n  clients: { [key: string]: DicomWebManager }\n}\n\ninterface WorklistState {\n  studies: dmv.metadata.Study[]\n  isLoading: boolean\n  numStudies: number\n  pageSize: number\n}\n\nclass Worklist extends React.Component<WorklistProps, WorklistState> {\n  private readonly defaultPageSize = 20\n\n  constructor (props: WorklistProps) {\n    super(props)\n    this.fetchData = this.fetchData.bind(this)\n    this.handleClick = this.handleClick.bind(this)\n    this.handleChange = this.handleChange.bind(this)\n    this.state = {\n      studies: [],\n      isLoading: false,\n      numStudies: 0,\n      pageSize: this.defaultPageSize\n    }\n  }\n\n  searchForStudies (): void {\n    const queryParams: { [key: string]: any } = { ModalitiesInStudy: 'SM' }\n    const searchOptions = { queryParams }\n    // TODO: retrieve remaining results\n    const client = this.props.clients[\n      StorageClasses.VL_WHOLE_SLIDE_MICROSCOPY_IMAGE\n    ]\n    client.searchForStudies(searchOptions).then((studies) => {\n      this.setState({\n        numStudies: studies.length,\n        studies: studies.slice(0, this.state.pageSize).map(study => {\n          const { dataset } = dmv.metadata.formatMetadata(study)\n          return dataset as dmv.metadata.Study\n        })\n      })\n    })\n      .catch((error) => {\n        console.error(error)\n        // eslint-disable-next-line @typescript-eslint/no-floating-promises\n        NotificationMiddleware.onError(\n          NotificationMiddlewareContext.DICOMWEB,\n          new CustomError(\n            errorTypes.COMMUNICATION,\n            'An error occured. Search for studies failed.'\n          )\n        )\n      })\n  }\n\n  componentDidMount (): void {\n    this.searchForStudies()\n  }\n\n  componentDidUpdate (previousProps: WorklistProps): void {\n    if (this.props.clients !== previousProps.clients) {\n      this.searchForStudies()\n    }\n  }\n\n  handleClick (event: React.SyntheticEvent, study: dmv.metadata.Study): void {\n    this.props.navigate(`/studies/${study.StudyInstanceUID}`)\n  }\n\n  fetchData ({ offset, limit, searchCriteria }: {\n    offset: number\n    limit: number\n    searchCriteria?: { [attribute: string]: string }\n  }): void {\n    const queryParams: { [key: string]: any } = {\n      ModalitiesInStudy: 'SM',\n      offset: offset,\n      limit: limit\n    }\n    if (searchCriteria !== undefined) {\n      for (const key in searchCriteria) {\n        const value = searchCriteria[key]\n        if (key === 'PersonName') {\n          queryParams[key] = `*${value}*`\n        } else {\n          queryParams[key] = value\n        }\n      }\n      queryParams.fuzzymatching = 'true'\n    }\n    const searchOptions = { queryParams }\n    const client = this.props.clients[\n      StorageClasses.VL_WHOLE_SLIDE_MICROSCOPY_IMAGE\n    ]\n    client.searchForStudies(searchOptions).then((studies) => {\n      this.setState({\n        studies: studies.map(study => {\n          const { dataset } = dmv.metadata.formatMetadata(study)\n          return dataset as dmv.metadata.Study\n        })\n      })\n    })\n      .catch((error) => {\n        console.error(error)\n        NotificationMiddleware.onError(\n          NotificationMiddlewareContext.DICOMWEB,\n          new CustomError(\n            errorTypes.COMMUNICATION,\n            'Request to search for studies failed.'\n          )\n        )\n      })\n  }\n\n  handleChange (\n    pagination: TablePaginationConfig,\n    filters: any\n  ): void {\n    this.setState({ isLoading: true })\n    let index = pagination.current\n    if (index === undefined) {\n      index = 1\n    }\n    let pageSize = pagination.pageSize\n    if (pageSize === undefined) {\n      pageSize = this.state.pageSize\n    }\n    const offset = pageSize * (index - 1)\n    const limit = pageSize\n    console.debug(`search for studies of page #${index}...`)\n    const searchCriteria: { [attribute: string]: string } = {}\n    for (const dataIndex in filters) {\n      if (filters[dataIndex] !== null) {\n        searchCriteria[dataIndex] = filters[dataIndex][0].toString()\n      }\n    }\n    this.fetchData({ offset, limit, searchCriteria })\n    this.setState({ isLoading: false, pageSize: pageSize })\n  }\n\n  handleSearch = (\n    selectedKeys: React.Key[],\n    confirm: (params?: FilterConfirmProps) => void,\n    dataIndex: string\n  ): void => {\n    confirm()\n  }\n\n  handleReset = (clearFilters: () => void): void => {\n    clearFilters()\n  }\n\n  render (): React.ReactNode {\n    const columns: ColumnsType<dmv.metadata.Study> = [\n      {\n        title: 'Accession Number',\n        dataIndex: 'AccessionNumber',\n        ...this.getColumnSearchProps('AccessionNumber')\n      },\n      {\n        title: 'Study ID',\n        dataIndex: 'StudyID',\n        ...this.getColumnSearchProps('StudyID')\n      },\n      {\n        title: 'Study Date',\n        dataIndex: 'StudyDate',\n        render: (value: string): string => parseDate(value)\n      },\n      {\n        title: 'Study Time',\n        dataIndex: 'StudyTime',\n        render: (value: string): string => parseTime(value)\n      },\n      {\n        title: 'Patient ID',\n        dataIndex: 'PatientID',\n        ...this.getColumnSearchProps('PatientID')\n      },\n      {\n        title: \"Patient's Name\",\n        dataIndex: 'PatientName',\n        render: (value: dmv.metadata.PersonName): string => parseName(value),\n        ...this.getColumnSearchProps('PatientName')\n      },\n      {\n        title: \"Patient's Sex\",\n        dataIndex: 'PatientSex',\n        render: (value: string): string => parseSex(value)\n      },\n      {\n        title: \"Patient's Birthdate\",\n        dataIndex: 'PatientBirthDate',\n        render: (value: string): string => parseDate(value)\n      },\n      {\n        title: \"Referring Physician's Name\",\n        dataIndex: 'ReferringPhysicianName',\n        render: (value: dmv.metadata.PersonName): string => parseName(value)\n      },\n      {\n        title: 'Modalities in Study',\n        dataIndex: 'ModalitiesInStudy',\n        render: (value: string[] | string): string => {\n          if (value === undefined) {\n            /*\n             * This should not happen, since the attribute is required.\n             * However, some origin servers don't include it.\n             */\n            return ''\n          } else {\n            return String(value)\n          }\n        }\n      }\n    ]\n\n    const pagination = {\n      defaultPageSize: this.defaultPageSize,\n      pageSize: this.state.pageSize,\n      hideOnSinglePage: true,\n      showSizeChanger: true,\n      showQuickJumper: true,\n      showTotal: (total: number, range: number[]) => {\n        return `${range[0]}-${range[1]} of ${total} studies`\n      },\n      total: this.state.numStudies\n    }\n\n    return (\n      <Table<dmv.metadata.Study>\n        style={{ cursor: 'pointer' }}\n        columns={columns}\n        rowKey={record => record.StudyInstanceUID}\n        dataSource={this.state.studies}\n        pagination={pagination}\n        onRow={(record: dmv.metadata.Study): object => {\n          return {\n            onClick: (event: React.SyntheticEvent): void => {\n              return this.handleClick(event, record)\n            }\n          }\n        }}\n        onChange={this.handleChange}\n        size='small'\n        loading={this.state.isLoading}\n      />\n    )\n  }\n\n  getColumnSearchProps = (dataIndex: string): object => ({\n    filterDropdown: ({ setSelectedKeys, selectedKeys, confirm, clearFilters }: {\n      setSelectedKeys: (selectedKeys: React.Key[]) => void\n      selectedKeys: React.Key[]\n      confirm: (params?: FilterConfirmProps) => void\n      clearFilters: () => void\n    }) => (\n      <div style={{ padding: 8 }}>\n        <Input\n          placeholder='Search'\n          value={selectedKeys[0]}\n          onChange={e => setSelectedKeys(\n            e.target.value !== undefined ? [e.target.value] : []\n          )}\n          onPressEnter={() => this.handleSearch(selectedKeys, confirm, dataIndex)}\n          style={{ width: 188, marginBottom: 8, display: 'block' }}\n        />\n        <Space>\n          <Button\n            type='primary'\n            onClick={() => this.handleSearch(selectedKeys, confirm, dataIndex)}\n            icon={<SearchOutlined />}\n            size='small'\n            style={{ width: 90 }}\n          >\n            Search\n          </Button>\n          <Button\n            onClick={() => this.handleReset(clearFilters)}\n            size='small'\n            style={{ width: 90 }}\n          >\n            Reset\n          </Button>\n        </Space>\n      </div>\n    ),\n    filterIcon: (filtered: boolean) => (\n      <SearchOutlined\n        style={{ color: filtered ? '#1890ff' : undefined }}\n      />\n    )\n  })\n}\n\nexport default withRouter(Worklist)\n","/**\n * Join a URI with a path to form a full URL.\n *\n * @param path - Path component\n * @param uri - Base URI to which the path component should be added\n */\nexport const joinUrl = (path: string, uri: string): string => {\n  let baseUri = uri\n  if (!baseUri.endsWith('/')) {\n    baseUri += '/'\n  }\n  const url = new URL(path, baseUri)\n  return url.toString()\n}\n\n/**\n * Check whether a URL contains an OAuth 2.0 authorization code.\n *\n * @param location - URL components (JavaScript location object)\n * @returns Whether the URL contains a code\n */\nexport const isAuthorizationCodeInUrl = (location: {\n  search: string\n  hash: string\n}): boolean => {\n  const searchParams = new URLSearchParams(location.search)\n  const hashParams = new URLSearchParams(location.hash.replace('#', '?'))\n\n  return Boolean(\n    searchParams.get('code') ??\n    searchParams.get('id_token') ??\n    searchParams.get('session_state') ??\n    hashParams.get('code') ??\n    hashParams.get('id_token') ??\n    hashParams.get('session_state')\n  )\n}\n","import { UserManager, User as UserData } from 'oidc-client'\n\nimport { OidcSettings } from '../AppConfig'\nimport { isAuthorizationCodeInUrl } from '../utils/url'\nimport { User, AuthManager, SignInCallback } from './'\nimport NotificationMiddleware,\n{ NotificationMiddlewareContext } from '../services/NotificationMiddleware'\nimport { CustomError, errorTypes } from '../utils/CustomError'\n\nconst createUser = (userData: UserData | null): User => {\n  let profile\n  if (userData !== null) {\n    profile = userData.profile\n  }\n\n  if (profile !== undefined) {\n    if (profile.name === undefined || profile.email === undefined) {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.AUTH,\n        new CustomError(\n          errorTypes.AUTHENTICATION,\n          'Failed to obtain user \"name\" and \"email\".'\n        )\n      )\n    } else {\n      return {\n        name: profile.name,\n        email: profile.email\n      }\n    }\n  } else {\n    NotificationMiddleware.onError(\n      NotificationMiddlewareContext.AUTH,\n      new CustomError(\n        errorTypes.AUTHENTICATION,\n        'Failed to obtain user profile.'\n      )\n    )\n  }\n  return {\n    name: undefined,\n    email: undefined\n  }\n}\n\nexport default class OidcManager implements AuthManager {\n  private _oidc: UserManager\n\n  constructor (baseUri: string, settings: OidcSettings) {\n    let responseType = 'code'\n    if (settings.grantType !== undefined) {\n      if (settings.grantType === 'implicit') {\n        responseType = 'id_token token'\n      }\n    }\n    this._oidc = new UserManager({\n      authority: settings.authority,\n      client_id: settings.clientId,\n      redirect_uri: baseUri,\n      scope: settings.scope,\n      response_type: responseType,\n      loadUserInfo: true,\n      automaticSilentRenew: true,\n      revokeAccessTokenOnSignout: true,\n      post_logout_redirect_uri: `${baseUri}/logout`\n    })\n    if (settings.endSessionEndpoint != null) {\n      /*\n       * Unfortunately, the end session endpoint alone cannot be provided to\n       * the construction of UserManager and the other metadata parameters\n       * would need to be provided as well. However, configuring all of them\n       * individually would not be desirable and they will be automatically\n       * determined anyways. Therefore, we first construct an object, get the\n       * metadata, update the metadata, and then reconstruct an object with the\n       * updated metadata.\n       */\n      this._oidc.metadataService.getMetadata().then(metadata => {\n        if (settings.endSessionEndpoint != null) {\n          metadata.end_session_endpoint = settings.endSessionEndpoint\n          this._oidc = new UserManager({\n            authority: settings.authority,\n            client_id: settings.clientId,\n            redirect_uri: baseUri,\n            scope: settings.scope,\n            response_type: responseType,\n            loadUserInfo: true,\n            automaticSilentRenew: true,\n            revokeAccessTokenOnSignout: true,\n            post_logout_redirect_uri: `${baseUri}/logout`,\n            metadata\n          })\n        }\n      }).catch((error) => {\n        console.error(\n          'failed to get metadata from authorization server: ',\n          error\n        )\n      })\n    }\n  }\n\n  /**\n   * Sign-in to authenticate the user and obtain authorization.\n   */\n  signIn = async ({ onSignIn }: {\n    onSignIn?: SignInCallback\n  }): Promise<void> => {\n    const handleSignIn = (userData: UserData): void => {\n      const user = createUser(userData)\n      const authorization = `${userData.token_type} ${userData.access_token}`\n      if (onSignIn != null) {\n        console.info('handling sign-in using provided callback function')\n        onSignIn({ user: user, authorization: authorization })\n      } else {\n        console.warn('no callback function was provided to handle sign-in')\n      }\n    }\n\n    if (isAuthorizationCodeInUrl(window.location)) {\n      /* Handle the callback from the authorization server: extract the code\n       * from the callback URL, obtain user information and the access token\n       * for the DICOMweb server.\n       */\n      console.info('obtaining authorization')\n      const userData = await this._oidc.signinCallback()\n      if (userData != null) {\n        console.info('obtained user data: ', userData)\n        handleSignIn(userData)\n      }\n    } else {\n      /* Redirect to the authorization server to authenticate the user\n       * and authorize the application to obtain user information and access\n       * the DICOMweb server.\n       */\n      const userData = await this._oidc.getUser()\n      if (userData === null || userData.expired) {\n        console.info('authenticating user')\n        await this._oidc.signinRedirect()\n      } else {\n        console.info('user has already been authenticated')\n        handleSignIn(userData)\n      }\n    }\n  }\n\n  /**\n   * Sign-out to revoke authorization.\n   */\n  signOut = async (): Promise<void> => {\n    console.log('signing out user and revoking authorization')\n    return await this._oidc.signoutRedirect()\n  }\n\n  /**\n   * Get authorization. Requires prior sign-in.\n   */\n  getAuthorization = async (): Promise<string|undefined> => {\n    return await this._oidc.getUser().then((userData) => {\n      if (userData !== null) {\n        return userData.access_token\n      } else {\n        NotificationMiddleware.onError(\n          NotificationMiddlewareContext.AUTH,\n          new CustomError(\n            errorTypes.AUTHENTICATION,\n            'Failed to obtain user profile.'\n          )\n        )\n      }\n    })\n  }\n\n  /**\n   * Get user information. Requires prior sign-in.\n   */\n  getUser = async (): Promise<User> => {\n    return await this._oidc.getUser().then((userData) => {\n      if (userData === null) {\n        NotificationMiddleware.onError(\n          NotificationMiddlewareContext.AUTH,\n          new CustomError(\n            errorTypes.AUTHENTICATION,\n            'Failed to obtain user information.'\n          )\n        )\n      }\n      return createUser(userData)\n    })\n  }\n}\n","import retry from 'retry'\n\nimport {\n  RetryRequestSettings,\n  DICOMwebClientRequestHookMetadata\n} from '../AppConfig'\n\ntype RequestHook = (\n  request: XMLHttpRequest,\n  metadata: DICOMwebClientRequestHookMetadata\n) => XMLHttpRequest\n\n/**\n * Returns a configured retry request hook function\n * that can be used to add retry functionality to XHR request.\n *\n * Default options:\n *   retries: 5\n *   factor: 3\n *   minTimeout: 1 * 1000\n *   maxTimeout: 60 * 1000\n *   randomize: true\n *\n * @param options\n * @param options.retires - Number of retries\n * @param options.factor - Factor\n * @param options.minTimeout - Min number of seconds to wait before next retry\n * @param options.maxTimeout - Max number of seconds to wait before next retry\n * @param options.randomize - Whether randomization should be applied\n * @param options.retryableStatusCodes HTTP status codes that can trigger a retry\n * @returns Configured retry request function\n */\nexport const getXHRRetryHook = (options: RetryRequestSettings = {\n  retries: 5,\n  factor: 3,\n  minTimeout: 1 * 1000,\n  maxTimeout: 60 * 1000,\n  randomize: true,\n  retryableStatusCodes: [429, 500]\n}): RequestHook => {\n  const retryOptions = options\n\n  if (options.retries != null) {\n    retryOptions.retries = options.retries\n  }\n\n  if (options.factor != null) {\n    retryOptions.factor = options.factor\n  }\n\n  if (options.minTimeout != null) {\n    retryOptions.minTimeout = options.minTimeout\n  }\n\n  if (options.maxTimeout != null) {\n    retryOptions.maxTimeout = options.maxTimeout\n  }\n\n  if (options.randomize != null) {\n    retryOptions.randomize = options.randomize\n  }\n\n  if (options.retryableStatusCodes != null) {\n    retryOptions.retryableStatusCodes = options.retryableStatusCodes\n  }\n\n  /**\n   * Request hook used to add retry functionality to XHR requests.\n   *\n   * @param request - XHR request instance\n   * @param metadata - Metadata about the request\n   * @param metadata.url - URL\n   * @param metadata.method - HTTP method\n   * @returns - XHR request instance (potentially modified)\n   */\n  const xhrRetryHook = (\n    request: XMLHttpRequest,\n    metadata: DICOMwebClientRequestHookMetadata\n  ): XMLHttpRequest => {\n    const { url, method } = metadata\n\n    function faultTolerantRequestSend (...args: any): void {\n      const operation = retry.operation(retryOptions)\n\n      operation.attempt(function operationAttempt (currentAttempt) {\n        const originalOnReadyStateChange = request.onreadystatechange\n\n        /** Overriding/extending XHR function */\n        request.onreadystatechange = function onReadyStateChange (...args: any): void {\n          if (originalOnReadyStateChange != null) {\n            originalOnReadyStateChange.apply(request, args)\n          }\n\n          if (retryOptions.retryableStatusCodes.includes(request.status)) {\n            const errorMessage = `Attempt to request ${url} failed.`\n            const attemptFailedError = new Error(errorMessage)\n            operation.retry(attemptFailedError)\n          }\n        }\n\n        /** Call open only on retry (after headers and other things were set in the xhr instance) */\n        if (currentAttempt > 1) {\n          console.warn(`Requesting ${url}... (attempt: ${currentAttempt})`)\n          request.open(method, url, true)\n        }\n      })\n\n      originalRequestSend.apply(request, args)\n    }\n\n    /** Overriding/extending XHR function */\n    const originalRequestSend = request.send\n    request.send = faultTolerantRequestSend\n\n    return request\n  }\n\n  return xhrRetryHook\n}\n\nexport default getXHRRetryHook\n","import * as dwc from 'dicomweb-client'\nimport * as dcmjs from 'dcmjs'\nimport * as dmv from 'dicom-microscopy-viewer'\n\nimport { ServerSettings, DicomWebManagerErrorHandler } from './AppConfig'\nimport { joinUrl } from './utils/url'\nimport getXHRRetryHook from './utils/xhrRetryHook'\nimport { CustomError, errorTypes } from './utils/CustomError'\nimport NotificationMiddleware, {\n  NotificationMiddlewareContext\n} from './services/NotificationMiddleware'\nimport DicomMetadataStore, { Instance } from './services/DICOMMetadataStore'\n\nconst { naturalizeDataset } = dcmjs.data.DicomMetaDictionary\n\ninterface Store {\n  id: string\n  read: boolean\n  write: boolean\n  client: dwc.api.DICOMwebClient\n}\n\nexport default class DicomWebManager implements dwc.api.DICOMwebClient {\n  private readonly stores: Store[] = []\n\n  private readonly handleError: DicomWebManagerErrorHandler\n\n  constructor ({ baseUri, settings, onError }: {\n    baseUri: string\n    settings: ServerSettings[]\n    onError?: DicomWebManagerErrorHandler\n  }) {\n    if (onError != null) {\n      this.handleError = onError\n    } else {\n      this.handleError = (error, serverSettings) => {\n        console.error(error, serverSettings)\n      }\n    }\n\n    settings.forEach(serverSettings => {\n      if (serverSettings === undefined) {\n        NotificationMiddleware.onError(\n          NotificationMiddlewareContext.SLIM,\n          new CustomError(\n            errorTypes.COMMUNICATION,\n            'At least one server needs to be configured.'\n          )\n        )\n      }\n\n      let serviceUrl\n      if (serverSettings.url !== undefined) {\n        serviceUrl = serverSettings.url\n      } else if (serverSettings.path !== undefined) {\n        serviceUrl = joinUrl(serverSettings.path, baseUri)\n      } else {\n        NotificationMiddleware.onError(\n          NotificationMiddlewareContext.SLIM,\n          new CustomError(\n            errorTypes.COMMUNICATION,\n            'Either path or full URL needs to be configured for server.'\n          )\n        )\n      }\n\n      const hasHttpsUrl = (url?: string): boolean => url?.startsWith('https') ?? false\n\n      const clientSettings: dwc.api.DICOMwebClientOptions = {\n        url: serviceUrl\n      }\n\n      const shouldUpgradeInsecure = serverSettings.upgradeInsecureRequests === true && [\n        serviceUrl,\n        serverSettings.qidoPathPrefix,\n        serverSettings.wadoPathPrefix,\n        serverSettings.stowPathPrefix\n      ].some(hasHttpsUrl)\n\n      if (serverSettings.qidoPathPrefix !== undefined) {\n        clientSettings.qidoURLPrefix = serverSettings.qidoPathPrefix\n      }\n      if (serverSettings.wadoPathPrefix !== undefined) {\n        clientSettings.wadoURLPrefix = serverSettings.wadoPathPrefix\n      }\n      if (serverSettings.stowPathPrefix !== undefined) {\n        clientSettings.stowURLPrefix = serverSettings.stowPathPrefix\n      }\n\n      if (shouldUpgradeInsecure) {\n        clientSettings.headers = {\n          ...clientSettings.headers,\n          'Content-Security-Policy': 'upgrade-insecure-requests'\n        }\n      }\n\n      if (serverSettings.retry !== undefined) {\n        clientSettings.requestHooks = [getXHRRetryHook(serverSettings.retry)]\n      }\n\n      clientSettings.errorInterceptor = (error: dwc.api.DICOMwebClientError) => {\n        this.handleError(error, serverSettings)\n      }\n\n      this.stores.push({\n        id: serverSettings.id,\n        write: serverSettings.write ?? false,\n        read: serverSettings.read ?? true,\n        client: new dwc.api.DICOMwebClient(clientSettings)\n      })\n    })\n\n    if (this.stores.length > 1) {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.COMMUNICATION,\n          'Only one store is supported for now.'\n        )\n      )\n    }\n  }\n\n  get baseURL (): string {\n    return this.stores[0].client.baseURL\n  }\n\n  updateHeaders = (fields: { [name: string]: string }): void => {\n    for (const f in fields) {\n      this.stores[0].client.headers[f] = fields[f]\n    }\n  }\n\n  get headers (): { [name: string]: string } {\n    return this.stores[0].client.headers\n  }\n\n  storeInstances = async (\n    options: dwc.api.StoreInstancesOptions\n  ): Promise<void> => {\n    if (this.stores[0].write) {\n      return await this.stores[0].client.storeInstances(options)\n    } else {\n      return await Promise.reject(\n        new Error('Store is not writable.')\n      )\n    }\n  }\n\n  searchForStudies = async (\n    options: dwc.api.SearchForStudiesOptions\n  ): Promise<dwc.api.Study[]> => {\n    return await this.stores[0].client.searchForStudies(options)\n  }\n\n  searchForSeries = async (\n    options: dwc.api.SearchForSeriesOptions\n  ): Promise<dwc.api.Series[]> => {\n    return await this.stores[0].client.searchForSeries(options)\n  }\n\n  searchForInstances = async (\n    options: dwc.api.SearchForInstancesOptions\n  ): Promise<dwc.api.Instance[]> => {\n    return await this.stores[0].client.searchForInstances(options)\n  }\n\n  retrieveStudyMetadata = async (\n    options: dwc.api.RetrieveStudyMetadataOptions\n  ): Promise<dwc.api.Metadata[]> => {\n    const studySummaryMetadata = await this.stores[0].client.retrieveStudyMetadata(options)\n    const naturalized = naturalizeDataset(studySummaryMetadata)\n    DicomMetadataStore.addStudy(naturalized)\n    return studySummaryMetadata\n  }\n\n  retrieveSeriesMetadata = async (\n    options: dwc.api.RetrieveSeriesMetadataOptions\n  ): Promise<dwc.api.Metadata[]> => {\n    const seriesSummaryMetadata = await this.stores[0].client.retrieveSeriesMetadata(options)\n    console.debug('seriesSummaryMetadata:', seriesSummaryMetadata)\n    const naturalized = seriesSummaryMetadata.map(naturalizeDataset)\n    console.debug('naturalized:', naturalized)\n    DicomMetadataStore.addSeriesMetadata(naturalized, true)\n    return seriesSummaryMetadata\n  }\n\n  retrieveInstanceMetadata = async (\n    options: dwc.api.RetrieveInstanceMetadataOptions\n  ): Promise<dwc.api.Metadata[]> => {\n    return await this.stores[0].client.retrieveInstanceMetadata(options)\n  }\n\n  retrieveInstance = async (\n    options: dwc.api.RetrieveInstanceOptions\n  ): Promise<dwc.api.Dataset> => {\n    const instance = await this.stores[0].client.retrieveInstance(options)\n    const data = dcmjs.data.DicomMessage.readFile(instance)\n    const { dataset } = dmv.metadata.formatMetadata(data.dict)\n    DicomMetadataStore.addInstances([dataset as Instance])\n    return instance\n  }\n\n  retrieveInstanceFrames = async (\n    options: dwc.api.RetrieveInstanceFramesOptions\n  ): Promise<dwc.api.Pixeldata[]> => {\n    return await this.stores[0].client.retrieveInstanceFrames(options)\n  }\n\n  retrieveInstanceRendered = async (\n    options: dwc.api.RetrieveInstanceRenderedOptions\n  ): Promise<dwc.api.Pixeldata> => {\n    return await this.stores[0].client.retrieveInstanceRendered(options)\n  }\n\n  retrieveInstanceFramesRendered = async (\n    options: dwc.api.RetrieveInstanceFramesRenderedOptions\n  ): Promise<dwc.api.Pixeldata> => {\n    return await this.stores[0].client.retrieveInstanceFramesRendered(options)\n  }\n\n  retrieveBulkData = async (\n    options: dwc.api.RetrieveBulkDataOptions\n  ): Promise<dwc.api.Bulkdata[]> => {\n    return await this.stores[0].client.retrieveBulkData(options)\n  }\n}\n","import React from 'react'\nimport {\n  BrowserRouter,\n  Navigate,\n  Route,\n  Routes,\n  useParams\n} from 'react-router-dom'\nimport { Layout, message } from 'antd'\nimport { FaSpinner } from 'react-icons/fa'\nimport * as dwc from 'dicomweb-client'\n\nimport AppConfig, { ServerSettings, ErrorMessageSettings } from './AppConfig'\nimport CaseViewer from './components/CaseViewer'\nimport Header from './components/Header'\nimport InfoPage from './components/InfoPage'\nimport Worklist from './components/Worklist'\n\nimport { User, AuthManager } from './auth'\nimport OidcManager from './auth/OidcManager'\nimport { StorageClasses } from './data/uids'\nimport DicomWebManager from './DicomWebManager'\nimport { joinUrl } from './utils/url'\nimport { CustomError, errorTypes } from './utils/CustomError'\nimport NotificationMiddleware, {\n  NotificationMiddlewareContext\n} from './services/NotificationMiddleware'\n\nfunction ParametrizedCaseViewer ({ clients, user, app, config }: {\n  clients: { [key: string]: DicomWebManager }\n  user?: User\n  app: {\n    name: string\n    version: string\n    uid: string\n    organization?: string\n  }\n  config: AppConfig\n}): JSX.Element {\n  const { studyInstanceUID } = useParams()\n\n  const enableAnnotationTools = !(config.disableAnnotationTools ?? false)\n  const preload = config.preload ?? false\n  return (\n    <CaseViewer\n      clients={clients}\n      user={user}\n      annotations={config.annotations}\n      preload={preload}\n      app={app}\n      enableAnnotationTools={enableAnnotationTools}\n      studyInstanceUID={studyInstanceUID}\n    />\n  )\n}\n\nfunction _createClientMapping ({ baseUri, gcpBaseUrl, settings, onError }: {\n  baseUri: string\n  gcpBaseUrl: string\n  settings: ServerSettings[]\n  onError: (\n    error: dwc.api.DICOMwebClientError,\n    serverSettings: ServerSettings\n  ) => void\n}): { [sopClassUID: string]: DicomWebManager } {\n  const storageClassMapping: { [key: string]: number } = { default: 0 }\n  const clientMapping: { [sopClassUID: string]: DicomWebManager } = {}\n\n  settings.forEach(serverSettings => {\n    if (serverSettings.storageClasses != null) {\n      serverSettings.storageClasses.forEach(sopClassUID => {\n        if (Object.values<string>(StorageClasses).includes(sopClassUID)) {\n          if (sopClassUID in storageClassMapping) {\n            storageClassMapping[sopClassUID] += 1\n          } else {\n            storageClassMapping[sopClassUID] = 1\n          }\n        } else {\n          console.warn(\n            `unknown storage class \"${sopClassUID}\" specified ` +\n            `for configured server \"${serverSettings.id}\"`\n          )\n        }\n      })\n    } else {\n      if (window.location.pathname.includes('/projects/')) {\n        const pathname = window.location.pathname.split('/study/')[0]\n        const pathUrl = `${gcpBaseUrl}${pathname}/dicomWeb`\n        serverSettings.url = pathUrl\n      }\n\n      storageClassMapping.default += 1\n      clientMapping.default = new DicomWebManager({\n        baseUri,\n        settings: [serverSettings],\n        onError\n      })\n    }\n  })\n\n  if (storageClassMapping.default > 1) {\n    NotificationMiddleware.onError(\n      NotificationMiddlewareContext.SLIM,\n      new CustomError(\n        errorTypes.COMMUNICATION,\n        'Only one default server can be configured without specification ' +\n        'of storage classes.'\n      )\n    )\n  }\n\n  for (const key in storageClassMapping) {\n    if (key === 'default') {\n      continue\n    }\n    if (storageClassMapping[key] > 1) {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.COMMUNICATION,\n          'Only one configured server can specify a given storage class. ' +\n          `Storage class \"${key}\" is specified by more than one ` +\n          'of the configured servers.'\n        )\n      )\n    }\n  }\n\n  if (Object.keys(storageClassMapping).length > 1) {\n    settings.forEach(server => {\n      const client = new DicomWebManager({\n        baseUri,\n        settings: [server],\n        onError\n      })\n      if (server.storageClasses != null) {\n        server.storageClasses.forEach(sopClassUID => {\n          clientMapping[sopClassUID] = client\n        })\n      }\n    })\n  }\n\n  Object.values(StorageClasses).forEach(sopClassUID => {\n    if (!(sopClassUID in clientMapping)) {\n      clientMapping[sopClassUID] = clientMapping.default\n    }\n  })\n  return clientMapping\n}\n\ninterface AppProps {\n  name: string\n  homepage: string\n  version: string\n  config: AppConfig\n}\n\ninterface AppState {\n  clients: { [sopClassUID: string]: DicomWebManager }\n  user?: User\n  isLoading: boolean\n  redirectTo?: string\n  wasAuthSuccessful: boolean\n  error?: ErrorMessageSettings\n}\n\nclass App extends React.Component<AppProps, AppState> {\n  private readonly auth?: AuthManager\n\n  private readonly handleDICOMwebError = (\n    error: dwc.api.DICOMwebClientError,\n    serverSettings: ServerSettings\n  ): void => {\n    if (error.status === 401) {\n      this.signIn()\n    } else if (error.status === 403) {\n      // eslint-disable-next-line @typescript-eslint/no-floating-promises\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.DICOMWEB,\n        new CustomError(\n          errorTypes.COMMUNICATION,\n          'User is not authorized to access DICOMweb resources.')\n      )\n    }\n\n    const logServerError = (): void => {\n      // eslint-disable-next-line @typescript-eslint/no-floating-promises\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.DICOMWEB,\n        new CustomError(\n          errorTypes.COMMUNICATION,\n          'An unexpected server error occured.'\n        )\n      )\n    }\n\n    if (serverSettings.errorMessages !== undefined) {\n      serverSettings.errorMessages.forEach((setting: ErrorMessageSettings) => {\n        if (error.status === setting.status) {\n          this.setState({\n            error: {\n              status: error.status,\n              message: setting.message\n            }\n          })\n        } else if (error.status === 500) {\n          logServerError()\n        }\n      })\n    } else if (error.status === 500) {\n      logServerError()\n    }\n  }\n\n  constructor (props: AppProps) {\n    super(props)\n\n    console.info('instatiate app')\n    console.info(`app is located at \"${props.config.path}\"`)\n    const { protocol, host } = window.location\n    const baseUri = `${protocol}//${host}`\n    const appUri = joinUrl(props.config.path, baseUri)\n\n    const oidcSettings = props.config.oidc\n    if (oidcSettings !== undefined) {\n      console.info(\n        'app uses the following OIDC configuration: ',\n        props.config.oidc\n      )\n      this.auth = new OidcManager(appUri, oidcSettings)\n    }\n\n    if (props.config.servers.length === 0) {\n      NotificationMiddleware.onError(\n        NotificationMiddlewareContext.SLIM,\n        new CustomError(\n          errorTypes.COMMUNICATION,\n          'One server needs to be configured.')\n      )\n    }\n    console.info(\n      'app uses the following DICOMweb server configuration: ',\n      props.config.servers\n    )\n\n    this.handleServerSelection = this.handleServerSelection.bind(this)\n\n    message.config({ duration: 5 })\n    this.addGcpSecondaryAnnotationServer(props.config)\n\n    this.state = {\n      clients: _createClientMapping({\n        baseUri,\n        gcpBaseUrl: props.config.gcpBaseUrl ?? 'https://healthcare.googleapis.com/v1',\n        settings: props.config.servers,\n        onError: this.handleDICOMwebError\n      }),\n      isLoading: true,\n      wasAuthSuccessful: false\n    }\n  }\n\n  addGcpSecondaryAnnotationServer (config: AppProps['config']): void {\n    const serverId = 'gcp_secondary_annotation_server'\n    const urlParams = new URLSearchParams(window.location.search)\n    const url = urlParams.get('gcp')\n    const gcpSecondaryAnnotationServer = config.servers.find(\n      (server) => server.id === serverId\n    )\n    if (gcpSecondaryAnnotationServer === undefined && typeof url === 'string') {\n      config.servers.push({\n        id: serverId,\n        write: true,\n        url,\n        storageClasses: [\n          StorageClasses.COMPREHENSIVE_SR,\n          StorageClasses.COMPREHENSIVE_3D_SR,\n          StorageClasses.SEGMENTATION,\n          StorageClasses.MICROSCOPY_BULK_SIMPLE_ANNOTATION,\n          StorageClasses.PARAMETRIC_MAP,\n          StorageClasses.ADVANCED_BLENDING_PRESENTATION_STATE,\n          StorageClasses.COLOR_SOFTCOPY_PRESENTATION_STATE,\n          StorageClasses.GRAYSCALE_SOFTCOPY_PRESENTATION_STATE,\n          StorageClasses.PSEUDOCOLOR_SOFTCOPY_PRESENTATION_STATE\n        ]\n      })\n    }\n  }\n\n  handleServerSelection ({ url }: { url: string }): void {\n    console.info('select DICOMweb server: ', url)\n    const tmpClient = new DicomWebManager({\n      baseUri: '',\n      settings: [{\n        id: 'tmp',\n        url,\n        read: true,\n        write: false\n      }],\n      onError: this.handleDICOMwebError\n    })\n    tmpClient.updateHeaders(this.state.clients.default.headers)\n    /**\n     * Use the newly created client for all storage classes. We may want to\n     * make this more sophisticated in the future to allow users to override\n     * the entire server configuration.\n     */\n    this.setState(state => {\n      const clients: { [key: string]: DicomWebManager } = {}\n      for (const key in state.clients) {\n        clients[key] = tmpClient\n      }\n      return { clients }\n    })\n  }\n\n  /**\n   * Handle successful authentication event.\n   *\n   * Authorizes the DICOMweb client to access the DICOMweb server and directs\n   * the user back to the App.\n   *\n   * @param user - Information about the user\n   * @param authorization - Value of the \"Authorization\" HTTP header field\n   */\n  handleSignIn = ({ user, authorization }: {\n    user: User\n    authorization: string\n  }): void => {\n    for (const key in this.state.clients) {\n      const client = this.state.clients[key]\n      client.updateHeaders({ Authorization: authorization })\n    }\n    const storedPath = window.localStorage.getItem('slim_path')\n    const storedSearch = window.localStorage.getItem('slim_search')\n    if (storedPath != null) {\n      const currentPath = window.location.pathname\n      if (storedPath !== currentPath) {\n        let path = storedPath\n        if (storedSearch != null) {\n          path += storedSearch\n        }\n        window.location.href = path\n      }\n    }\n    window.localStorage.removeItem('slim_path')\n    window.localStorage.removeItem('slim_search')\n    this.setState({ user: user })\n  }\n\n  signIn (): void {\n    if (this.auth !== undefined) {\n      console.info('try to sign in user')\n      this.auth.signIn({ onSignIn: this.handleSignIn }).then(() => {\n        console.info('sign-in was successful')\n        this.setState({\n          isLoading: false,\n          wasAuthSuccessful: true\n        })\n      }).catch((error) => {\n        console.error(error)\n        // eslint-disable-next-line @typescript-eslint/no-floating-promises\n        NotificationMiddleware.onError(\n          NotificationMiddlewareContext.AUTH,\n          new CustomError(\n            errorTypes.AUTHENTICATION,\n            'Could not sign-in user.')\n        )\n        this.setState({\n          isLoading: false,\n          redirectTo: undefined,\n          wasAuthSuccessful: false\n        })\n      })\n    } else {\n      this.setState({\n        isLoading: false,\n        redirectTo: undefined,\n        wasAuthSuccessful: true\n      })\n    }\n  }\n\n  componentDidMount (): void {\n    const path = window.localStorage.getItem('slim_path')\n    if (path == null) {\n      window.localStorage.setItem('slim_path', window.location.pathname)\n      window.localStorage.setItem('slim_search', window.location.search)\n    }\n    this.signIn()\n  }\n\n  render (): React.ReactNode {\n    const appInfo = {\n      name: this.props.name,\n      version: this.props.version,\n      homepage: this.props.homepage,\n      uid: '1.2.826.0.1.3680043.9.7433.1.5',\n      organization: this.props.config.organization\n    }\n\n    const enableWorklist = !(\n      this.props.config.disableWorklist ?? false\n    )\n    const enableServerSelection = (\n      this.props.config.enableServerSelection ?? false\n    )\n\n    let worklist\n    if (enableWorklist) {\n      worklist = <Worklist clients={this.state.clients} />\n    } else {\n      worklist = <div>Worklist has been disabled.</div>\n    }\n\n    let isLogoutPossible = false\n    let onLogout: () => void\n    if (\n      // eslint-disable-next-line @typescript-eslint/prefer-optional-chain\n      this.props.config.oidc != null &&\n      this.props.config.oidc.endSessionEndpoint != null\n    ) {\n      onLogout = (): void => {\n        if (this.auth != null) {\n          // eslint-disable-next-line @typescript-eslint/no-floating-promises\n          this.auth.signOut()\n        }\n      }\n      isLogoutPossible = true\n    } else {\n      onLogout = () => {}\n      isLogoutPossible = false\n    }\n\n    const layoutStyle = { height: '100vh' }\n    const layoutContentStyle = { height: '100%' }\n\n    if (this.state.redirectTo !== undefined) {\n      return (\n        <BrowserRouter basename={this.props.config.path}>\n          <Navigate to={this.state.redirectTo} replace />\n        </BrowserRouter>\n      )\n    } else if (this.state.isLoading) {\n      return (\n        <BrowserRouter basename={this.props.config.path}>\n          <Layout style={layoutStyle}>\n            <Header\n              app={appInfo}\n              user={this.state.user}\n              showWorklistButton={false}\n              onServerSelection={this.handleServerSelection}\n              showServerSelectionButton={false}\n              clients={this.state.clients}\n            />\n            <Layout.Content style={layoutContentStyle}>\n              <FaSpinner />\n            </Layout.Content>\n          </Layout>\n        </BrowserRouter>\n      )\n    } else if (!this.state.wasAuthSuccessful) {\n      return (\n        <InfoPage type='error' message='Sign-in failed.' />\n      )\n    } else if (this.state.error != null) {\n      return (\n        <InfoPage type='error' message={this.state.error.message} />\n      )\n    } else {\n      return (\n        <BrowserRouter basename={this.props.config.path}>\n          <Routes>\n            <Route\n              path='/'\n              element={\n                <Layout style={layoutStyle}>\n                  <Header\n                    app={appInfo}\n                    user={this.state.user}\n                    showWorklistButton={false}\n                    onServerSelection={this.handleServerSelection}\n                    onUserLogout={isLogoutPossible ? onLogout : undefined}\n                    showServerSelectionButton={enableServerSelection}\n                  />\n                  <Layout.Content style={layoutContentStyle}>\n                    {worklist}\n                  </Layout.Content>\n                </Layout>\n              }\n            />\n            <Route\n              path='/studies/:studyInstanceUID/*'\n              element={\n                <Layout style={layoutStyle}>\n                  <Header\n                    app={appInfo}\n                    user={this.state.user}\n                    showWorklistButton={enableWorklist}\n                    onServerSelection={this.handleServerSelection}\n                    onUserLogout={isLogoutPossible ? onLogout : undefined}\n                    showServerSelectionButton={enableServerSelection}\n                  />\n                  <Layout.Content style={layoutContentStyle}>\n                    <ParametrizedCaseViewer\n                      clients={this.state.clients}\n                      user={this.state.user}\n                      config={this.props.config}\n                      app={appInfo}\n                    />\n                  </Layout.Content>\n                </Layout>\n              }\n            />\n            <Route\n              path='/projects/:project/locations/:location/datasets/:dataset/dicomStores/:dicomStore/study/:studyInstanceUID/*'\n              element={\n                <Layout style={layoutStyle}>\n                  <Header\n                    app={appInfo}\n                    user={this.state.user}\n                    showWorklistButton={enableWorklist}\n                    onServerSelection={this.handleServerSelection}\n                    onUserLogout={isLogoutPossible ? onLogout : undefined}\n                    showServerSelectionButton={enableServerSelection}\n                  />\n                  <Layout.Content style={layoutContentStyle}>\n                    <ParametrizedCaseViewer\n                      clients={this.state.clients}\n                      user={this.state.user}\n                      config={this.props.config}\n                      app={appInfo}\n                    />\n                  </Layout.Content>\n                </Layout>\n              }\n            />\n            <Route\n              path='/logout'\n              element={\n                <Layout style={layoutStyle}>\n                  <Header\n                    app={appInfo}\n                    user={this.state.user}\n                    showWorklistButton={false}\n                    onServerSelection={this.handleServerSelection}\n                    onUserLogout={isLogoutPossible ? onLogout : undefined}\n                    showServerSelectionButton={enableServerSelection}\n                  />\n                  Logged out\n                </Layout>\n              }\n            />\n          </Routes>\n        </BrowserRouter>\n      )\n    }\n  }\n}\n\nexport default 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