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mkdocs.yml
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site_name: OHSU - Advance Computing Center
# Navigation
nav:
- Home: index.md
- Exacloud Platform:
- What is Exacloud?: exacloud/00-exacloud.md
- Basic Access: exacloud/01-basic-access.md
- FAQ: exacloud/02-FAQ.md
- Policy: exacloud/03-Policy.md
- Exacloud User Guie:
- Introduction: exacloud/04-Introduction.md
- Job Scheduler: exacloud/05-Job-Scheduler.md
- Parallel Computation: exacloud/06-Parallel-Computation.md
- Storage: exacloud/07-Storage.md
- Singularity: exacloud/08-Singularity.md
- GPU: exacloud/09-GPU.md
- Graphical Applications: exacloud/10-Graphical-Applications.md
- Group File Ownership: exacloud/11-Group-File-Ownership.md
- Jupyter: exacloud/12-Jupyter.md
- Modules: exacloud/13-Modules.md
- MPI: exacloud/14-MPI.md
- Perl Tips: exacloud/15-Perl-Tips.md
- Docker: exacloud/16-Docker.md
- Troubleshooting: exacloud/17-Troubleshooting.md
- Spack: exacloud/18-Spack.md
- RStudio: exacloud/19-RStudio.md
- R kernel in jupyter notebook: exacloud/20-R-kernel-in-jupyter-notebook.md
- cryo-EM: exacloud/21-cryo-EM.md
- VS Code: exacloud/22-VS-code.md
- Julia: exacloud/23-Julia.md
- Web Portal: exacloud/24-Web-Portal.md
- Exastack:
- What is Exastack: exastack/00-Exastack.md
- Command Line Operations: exastack/01-Command-Line-Operation.md
- Introduction: exastack/02-Introduction.md
- Launch a Virtual Machine: exastack/03-Launch-a-Virtual-Machine.md
- Security Groups: exastack/04-Security-Groups.md
- VM Configuration with Cloud-Init: exastack/05-VM-Configuration-with-Cloud-Init.md
- General:
- DUO: general/00-Duo.md
- Remote SSH Access: general/01-Remote-SSH-Access.md
- Globus:
- Introduction: globus/00-Introduction.md
- How to:
- ACC Objects Storage: how-to/00-ACC-Objects-Storage.md
- ACC Remote Access: how-to/01-ACC-Remote-Access.md
- Changing Your Unix Group ID: how-to/02-Changing-Your-Unix-Group-ID.md
- Configuring umask: how-to/03-Configuring-umask.md
- Red Hat/CentOS Software Collections (SCL): how-to/04-Red-Hat-CentOS-Software-Collections-(SCL).md
- Using ProxyJump with SSH and SCP: how-to/05-Using-ProxyJumpith-SSH-and-SCP.md
- Windows SSH Tunneling: how-to/06-Windows-SSH-Tunneling.md
#Configuration
theme:
name: material
logo: images/logo-ohsu.png
favicon: images/ohsu.ico
palette:
- scheme: ohsu
toggle:
icon: material/toggle-switch
name: Switch to dark mode
- scheme: ohsu
toggle:
icon: material/toggle-switch-off-outline
name: Switch to light mode
features:
# - toc.integrate
- navigation.expand
extra_css:
- stylesheets/extra.css
#Extension
markdown_extensions:
- admonition
- pymdownx.details
- pymdownx.superfences:
custom_fences:
- name: mermaid
class: mermaid
format: !!python/name:pymdownx.superfences.fence_code_format
- pymdownx.tabbed:
alternate_style: true
- attr_list
- md_in_html
- pymdownx.tasklist:
custom_checkbox: true
#Plugins
plugins:
- macros
- search