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Histology slide viewer

This software provides a whole slide image viewer. It is based on the openslide-python bindings and OpenSeadragon tiled image viewer .

The viewer is available with an example image at (hdl-histology.northeurope.cloudapp.azure.com). It is possible to run the server locally using the provided Dockerfile, however, this does not include any example slides. The example slides has to be placed in the static/images/pathology/ folder.

Slide annotation how-to

The viewer features cell identification and couting through our hovernet container running on Azure.