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environment.yml
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environment.yml
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name: hybrid
channels:
- pytorch
- nvidia
- conda-forge
- bioconda
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=2_gnu
- aom=3.9.1=hac33072_0
- blas=1.0=mkl
- brotli-python=1.1.0=py310hc6cd4ac_1
- bzip2=1.0.8=hd590300_5
- ca-certificates=2024.7.4=hbcca054_0
- cairo=1.18.0=hbb29018_2
- certifi=2024.7.4=pyhd8ed1ab_0
- cffi=1.16.0=py310h2fee648_0
- charset-normalizer=3.3.2=pyhd8ed1ab_0
- cuda-cudart=12.1.105=0
- cuda-cupti=12.1.105=0
- cuda-libraries=12.1.0=0
- cuda-nvrtc=12.1.105=0
- cuda-nvtx=12.1.105=0
- cuda-opencl=12.5.39=0
- cuda-runtime=12.1.0=0
- cuda-version=12.5=3
- dav1d=1.2.1=hd590300_0
- expat=2.6.2=h59595ed_0
- ffmpeg=7.0.1=gpl_h9be9148_104
- filelock=3.15.4=pyhd8ed1ab_0
- font-ttf-dejavu-sans-mono=2.37=hab24e00_0
- font-ttf-inconsolata=3.000=h77eed37_0
- font-ttf-source-code-pro=2.038=h77eed37_0
- font-ttf-ubuntu=0.83=h77eed37_2
- fontconfig=2.14.2=h14ed4e7_0
- fonts-conda-ecosystem=1=0
- fonts-conda-forge=1=0
- freetype=2.12.1=h267a509_2
- fribidi=1.0.10=h36c2ea0_0
- gettext=0.22.5=h59595ed_2
- gettext-tools=0.22.5=h59595ed_2
- gmp=6.3.0=hac33072_2
- gmpy2=2.1.5=py310hc7909c9_1
- gnutls=3.7.9=hb077bed_0
- graphite2=1.3.13=h59595ed_1003
- h2=4.1.0=pyhd8ed1ab_0
- harfbuzz=9.0.0=hfac3d4d_0
- hpack=4.0.0=pyh9f0ad1d_0
- hyperframe=6.0.1=pyhd8ed1ab_0
- icu=73.2=h59595ed_0
- idna=3.7=pyhd8ed1ab_0
- intel-openmp=2022.0.1=h06a4308_3633
- jinja2=3.1.4=pyhd8ed1ab_0
- lame=3.100=h166bdaf_1003
- lcms2=2.16=hb7c19ff_0
- ld_impl_linux-64=2.40=hf3520f5_7
- lerc=4.0.0=h27087fc_0
- libabseil=20240116.2=cxx17_h59595ed_0
- libasprintf=0.22.5=h661eb56_2
- libasprintf-devel=0.22.5=h661eb56_2
- libass=0.17.1=h39113c1_2
- libblas=3.9.0=16_linux64_mkl
- libcblas=3.9.0=16_linux64_mkl
- libcublas=12.1.0.26=0
- libcufft=11.0.2.4=0
- libcufile=1.10.1.7=0
- libcurand=10.3.6.82=0
- libcusolver=11.4.4.55=0
- libcusparse=12.0.2.55=0
- libdeflate=1.20=hd590300_0
- libdrm=2.4.122=h4ab18f5_0
- libexpat=2.6.2=h59595ed_0
- libffi=3.4.2=h7f98852_5
- libgcc-ng=14.1.0=h77fa898_0
- libgettextpo=0.22.5=h59595ed_2
- libgettextpo-devel=0.22.5=h59595ed_2
- libglib=2.80.3=h8a4344b_1
- libgomp=14.1.0=h77fa898_0
- libhwloc=2.11.1=default_hecaa2ac_1000
- libiconv=1.17=hd590300_2
- libidn2=2.3.7=hd590300_0
- libjpeg-turbo=3.0.0=hd590300_1
- liblapack=3.9.0=16_linux64_mkl
- libnpp=12.0.2.50=0
- libnsl=2.0.1=hd590300_0
- libnvjitlink=12.1.105=0
- libnvjpeg=12.1.1.14=0
- libopenvino=2024.2.0=h2da1b83_1
- libopenvino-auto-batch-plugin=2024.2.0=hb045406_1
- libopenvino-auto-plugin=2024.2.0=hb045406_1
- libopenvino-hetero-plugin=2024.2.0=h5c03a75_1
- libopenvino-intel-cpu-plugin=2024.2.0=h2da1b83_1
- libopenvino-intel-gpu-plugin=2024.2.0=h2da1b83_1
- libopenvino-intel-npu-plugin=2024.2.0=he02047a_1
- libopenvino-ir-frontend=2024.2.0=h5c03a75_1
- libopenvino-onnx-frontend=2024.2.0=h07e8aee_1
- libopenvino-paddle-frontend=2024.2.0=h07e8aee_1
- libopenvino-pytorch-frontend=2024.2.0=he02047a_1
- libopenvino-tensorflow-frontend=2024.2.0=h39126c6_1
- libopenvino-tensorflow-lite-frontend=2024.2.0=he02047a_1
- libopus=1.3.1=h7f98852_1
- libpciaccess=0.18=hd590300_0
- libpng=1.6.43=h2797004_0
- libprotobuf=4.25.3=h08a7969_0
- libsqlite=3.46.0=hde9e2c9_0
- libstdcxx-ng=14.1.0=hc0a3c3a_0
- libtasn1=4.19.0=h166bdaf_0
- libtiff=4.6.0=h1dd3fc0_3
- libunistring=0.9.10=h7f98852_0
- libuuid=2.38.1=h0b41bf4_0
- libva=2.22.0=hb711507_0
- libvpx=1.14.1=hac33072_0
- libwebp-base=1.4.0=hd590300_0
- libxcb=1.16=hd590300_0
- libxcrypt=4.4.36=hd590300_1
- libxml2=2.12.7=h4c95cb1_3
- libzlib=1.3.1=h4ab18f5_1
- llvm-openmp=15.0.7=h0cdce71_0
- markupsafe=2.1.5=py310h2372a71_0
- mkl=2022.1.0=hc2b9512_224
- mpc=1.3.1=hfe3b2da_0
- mpfr=4.2.1=h9458935_1
- mpmath=1.3.0=pyhd8ed1ab_0
- ncurses=6.5=h59595ed_0
- nettle=3.9.1=h7ab15ed_0
- networkx=3.3=pyhd8ed1ab_1
- ocl-icd=2.3.2=hd590300_1
- openh264=2.4.1=h59595ed_0
- openjpeg=2.5.2=h488ebb8_0
- openssl=3.3.1=h4ab18f5_1
- p11-kit=0.24.1=hc5aa10d_0
- pcre2=10.44=h0f59acf_0
- pillow=10.4.0=py310hebfe307_0
- pip=24.0=pyhd8ed1ab_0
- pixman=0.43.2=h59595ed_0
- pthread-stubs=0.4=h36c2ea0_1001
- pugixml=1.14=h59595ed_0
- pycparser=2.22=pyhd8ed1ab_0
- pysocks=1.7.1=pyha2e5f31_6
- python=3.10.14=hd12c33a_0_cpython
- python_abi=3.10=4_cp310
- pytorch=2.1.2=py3.10_cuda12.1_cudnn8.9.2_0
- pytorch-cuda=12.1=ha16c6d3_5
- pytorch-mutex=1.0=cuda
- pyyaml=6.0.1=py310h2372a71_1
- readline=8.2=h8228510_1
- requests=2.32.3=pyhd8ed1ab_0
- setuptools=70.3.0=pyhd8ed1ab_0
- snappy=1.2.1=ha2e4443_0
- svt-av1=2.1.2=hac33072_0
- sympy=1.12.1=pypyh2585a3b_103
- tbb=2021.12.0=h434a139_3
- tk=8.6.13=noxft_h4845f30_101
- torchaudio=2.1.2=py310_cu121
- torchtriton=2.1.0=py310
- torchvision=0.16.2=py310_cu121
- typing_extensions=4.12.2=pyha770c72_0
- urllib3=2.2.2=pyhd8ed1ab_1
- wayland=1.23.0=h5291e77_0
- wayland-protocols=1.36=hd8ed1ab_0
- wheel=0.43.0=pyhd8ed1ab_1
- x264=1!164.3095=h166bdaf_2
- x265=3.5=h924138e_3
- xorg-fixesproto=5.0=h7f98852_1002
- xorg-kbproto=1.0.7=h7f98852_1002
- xorg-libice=1.1.1=hd590300_0
- xorg-libsm=1.2.4=h7391055_0
- xorg-libx11=1.8.9=hb711507_1
- xorg-libxau=1.0.11=hd590300_0
- xorg-libxdmcp=1.1.3=h7f98852_0
- xorg-libxext=1.3.4=h0b41bf4_2
- xorg-libxfixes=5.0.3=h7f98852_1004
- xorg-libxrender=0.9.11=hd590300_0
- xorg-renderproto=0.11.1=h7f98852_1002
- xorg-xextproto=7.3.0=h0b41bf4_1003
- xorg-xproto=7.0.31=h7f98852_1007
- xz=5.2.6=h166bdaf_0
- yaml=0.2.5=h7f98852_2
- zlib=1.3.1=h4ab18f5_1
- zstandard=0.22.0=py310hab88d88_1
- zstd=1.5.6=ha6fb4c9_0
- pip:
- absl-py==2.1.0
- aiohttp==3.9.5
- aiosignal==1.3.1
- asttokens==2.4.1
- async-timeout==4.0.3
- attrs==23.2.0
- autoflake==2.3.1
- black==24.4.2
- click==8.1.7
- contourpy==1.2.1
- cycler==0.12.1
- decorator==5.1.1
- docker-pycreds==0.4.0
- docstring-parser==0.16
- exceptiongroup==1.2.2
- executing==2.0.1
- fonttools==4.53.1
- frozenlist==1.4.1
- fsspec==2024.6.1
- gitdb==4.0.11
- gitpython==3.1.43
- grpcio==1.64.1
- h5py==3.11.0
- importlib-resources==6.4.0
- ipdb==0.13.13
- ipython==8.26.0
- isort==5.13.2
- jedi==0.19.1
- joblib==1.4.2
- jsonargparse==4.31.0
- kiwisolver==1.4.5
- lightning==2.3.3
- lightning-bolts==0.7.0
- lightning-utilities==0.11.3.post0
- markdown==3.6
- matplotlib==3.9.1
- matplotlib-inline==0.1.7
- multidict==6.0.5
- mypy-extensions==1.0.0
- nibabel==5.2.1
- numpy==1.25.2
- packaging==24.1
- pandas==2.2.2
- parso==0.8.4
- pathspec==0.12.1
- pexpect==4.9.0
- platformdirs==4.2.2
- prompt-toolkit==3.0.47
- protobuf==4.25.3
- psutil==6.0.0
- ptyprocess==0.7.0
- pure-eval==0.2.2
- pycodestyle==2.12.0
- pyflakes==3.2.0
- pygments==2.18.0
- pyparsing==3.1.2
- python-dateutil==2.9.0.post0
- pytz==2024.1
- scikit-learn==1.5.1
- scipy==1.9.3
- sentry-sdk==2.9.0
- setproctitle==1.3.3
- six==1.16.0
- smmap==5.0.1
- stack-data==0.6.3
- tensorboard==2.17.0
- tensorboard-data-server==0.7.2
- threadpoolctl==3.5.0
- tomli==2.0.1
- torchmetrics==1.4.0.post0
- tqdm==4.66.4
- traitlets==5.14.3
- typeshed-client==2.5.1
- tzdata==2024.1
- wandb==0.17.4
- wcwidth==0.2.13
- werkzeug==3.0.3
- yarl==1.9.4