build-test-linux.yml

name: CI-LINUX

on:
  push:
    branches: [master]
  pull_request:
    branches: [master]

jobs:

  tests:
    name: "Build and test for Python ${{ matrix.python-version }}"
    runs-on: ubuntu-latest

    strategy:
      matrix:
        python-version:
          - "3.11"

    steps:
      - name: Check out repo
        uses: actions/checkout@v4

      - name: Setup Micromamba
        uses: mamba-org/setup-micromamba@v2
        with:
          environment-file: ./installation/sira_env.yml
          environment-name: sira_env
          create-args: >-
            python=${{ matrix.python-version }}
            libtiff
            libpng
          cache-environment: true

      - name: Install env requirements
        shell: bash -l {0}
        run: |
          micromamba activate sira_env
          pip install uv
          uv pip install -r ./installation/sira_req.txt

      - name: Run pytest
        shell: bash -l {0}
        run: |
          micromamba activate sira_env
          pytest

      - name: Upload coverage data
        uses: actions/upload-artifact@v3
        with:
          name: coverage-data
          path: .coverage.*
          overwrite: true
          include-hidden-files: true
          if-no-files-found: warn