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I am facing the following issue.
downloading step didn't show any error or warning. but every time I run the build command this error comes up.
terminate called after throwing an instance of 'jellyfish::compacted_hash::ErrorReading'
what(): 'database_10916': File truncated
/home/anaconda3/libexec/build_db.sh: line 146: 9593 Aborted (core dumped) $JELLYFISH_BIN merge -o database.jdb.tmp database_*
The text was updated successfully, but these errors were encountered:
terminate called after throwing an instance of 'jellyfish::compacted_hash::ErrorReading'
what(): 'database_1917': File truncated
/home/jason/Documents/kraken-master/build_kraken_db.sh: line 96: 1497144 Aborted (core dumped) jellyfish merge -o database.jdb.tmp database_*
Although I modified build_kraken_db.sh script line 82, by adding an -s 10000000 tag to overcome line's 87 mv error: argument list too long
jellyfish count -m $KRAKEN_KMER_LEN -s $KRAKEN_HASH_SIZE -C -t $KRAKEN_THREAD_CT
-o database /dev/fd/0 -s 10000000
I am facing the following issue.
downloading step didn't show any error or warning. but every time I run the build command this error comes up.
terminate called after throwing an instance of 'jellyfish::compacted_hash::ErrorReading'
what(): 'database_10916': File truncated
/home/anaconda3/libexec/build_db.sh: line 146: 9593 Aborted (core dumped) $JELLYFISH_BIN merge -o database.jdb.tmp database_*
The text was updated successfully, but these errors were encountered: