diff --git a/.dev/Manifest.toml b/.dev/Manifest.toml index 0dec8fad25c..d08637b1d7e 100644 --- a/.dev/Manifest.toml +++ b/.dev/Manifest.toml @@ -79,9 +79,9 @@ version = "0.21.4" [[deps.JuliaFormatter]] deps = ["CSTParser", "CommonMark", "DataStructures", "Glob", "Pkg", "PrecompileTools", "Tokenize"] -git-tree-sha1 = "b588d0d7e15d100f5d417c036e42a64d20eef496" +git-tree-sha1 = "8f5295e46f594ad2d8652f1098488a77460080cd" uuid = "98e50ef6-434e-11e9-1051-2b60c6c9e899" -version = "1.0.44" +version = "1.0.45" [[deps.LibCURL]] deps = ["LibCURL_jll", "MozillaCACerts_jll"] diff --git a/docs/Manifest.toml b/docs/Manifest.toml index fb798e76c89..10cb901f6bd 100644 --- a/docs/Manifest.toml +++ b/docs/Manifest.toml @@ -269,10 +269,10 @@ uuid = "3a4d1b5c-c61d-41fd-a00a-5873ba7a1b0d" version = "0.5.6" [[deps.ClimaCore]] -deps = ["Adapt", "BandedMatrices", "BlockArrays", "CUDA", "ClimaComms", "CubedSphere", "DataStructures", "DocStringExtensions", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "KrylovKit", "LinearAlgebra", "Memoize", "PkgVersion", "RecursiveArrayTools", "RootSolvers", "SparseArrays", "Static", "StaticArrays", "Statistics", "WeakValueDicts"] -git-tree-sha1 = "43208b8137d752e4410ccd7305a69d09d88743ec" +deps = ["Adapt", "BandedMatrices", "BlockArrays", "CUDA", "ClimaComms", "CubedSphere", "DataStructures", "DocStringExtensions", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "KrylovKit", "LinearAlgebra", "Memoize", "PkgVersion", "RecursiveArrayTools", "RootSolvers", "SparseArrays", "Static", "StaticArrays", "Statistics", "Unrolled", "WeakValueDicts"] +git-tree-sha1 = "de400c8d487ca34c7a70a92b45e861408a0e7eee" uuid = "d414da3d-4745-48bb-8d80-42e94e092884" -version = "0.11.5" +version = "0.11.6" weakdeps = ["Krylov"] [deps.ClimaCore.extensions] @@ -448,9 +448,9 @@ version = "0.1.0+0" [[deps.DiffEqBase]] deps = ["ArrayInterface", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces"] -git-tree-sha1 = "4aff905c723e3f883064f00a4ba553b29372ce57" +git-tree-sha1 = "09ce9525b590bcdd9a807142dc493692aee85ef9" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.142.0" +version = "6.143.0" [deps.DiffEqBase.extensions] DiffEqBaseChainRulesCoreExt = "ChainRulesCore" @@ -615,9 +615,9 @@ uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee" [[deps.FillArrays]] deps = ["LinearAlgebra", "Random"] -git-tree-sha1 = "25a10f2b86118664293062705fd9c7e2eda881a2" +git-tree-sha1 = "5b93957f6dcd33fc343044af3d48c215be2562f1" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "1.9.2" +version = "1.9.3" [deps.FillArrays.extensions] FillArraysPDMatsExt = "PDMats" @@ -1517,9 +1517,9 @@ version = "0.8.8" [[deps.StaticArrayInterface]] deps = ["ArrayInterface", "Compat", "IfElse", "LinearAlgebra", "PrecompileTools", "Requires", "SparseArrays", "Static", "SuiteSparse"] -git-tree-sha1 = "03fec6800a986d191f64f5c0996b59ed526eda25" +git-tree-sha1 = "5d66818a39bb04bf328e92bc933ec5b4ee88e436" uuid = "0d7ed370-da01-4f52-bd93-41d350b8b718" -version = "1.4.1" +version = "1.5.0" weakdeps = ["OffsetArrays", "StaticArrays"] [deps.StaticArrayInterface.extensions] @@ -1704,6 +1704,12 @@ version = "1.0.2" [[deps.Unicode]] uuid = "4ec0a83e-493e-50e2-b9ac-8f72acf5a8f5" +[[deps.Unrolled]] +deps = ["MacroTools"] +git-tree-sha1 = "6cc9d682755680e0f0be87c56392b7651efc2c7b" +uuid = "9602ed7d-8fef-5bc8-8597-8f21381861e8" +version = "0.1.5" + [[deps.UnsafeAtomics]] git-tree-sha1 = "6331ac3440856ea1988316b46045303bef658278" uuid = "013be700-e6cd-48c3-b4a1-df204f14c38f" diff --git a/examples/Manifest.toml b/examples/Manifest.toml index a822e242426..66ac4e37329 100644 --- a/examples/Manifest.toml +++ b/examples/Manifest.toml @@ -2,7 +2,7 @@ julia_version = "1.9.4" manifest_format = "2.0" -project_hash = "94725b056650c16e4c4a7c8208143851b8e699ff" +project_hash = "2debfafcce1272e50149f634c9d07221a58b6f9d" [[deps.ADTypes]] git-tree-sha1 = "332e5d7baeff8497b923b730b994fa480601efc7" @@ -314,10 +314,10 @@ uuid = "3a4d1b5c-c61d-41fd-a00a-5873ba7a1b0d" version = "0.5.6" [[deps.ClimaCore]] -deps = ["Adapt", "BandedMatrices", "BlockArrays", "CUDA", "ClimaComms", "CubedSphere", "DataStructures", "DocStringExtensions", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "KrylovKit", "LinearAlgebra", "Memoize", "PkgVersion", "RecursiveArrayTools", "RootSolvers", "SparseArrays", "Static", "StaticArrays", "Statistics", "WeakValueDicts"] -git-tree-sha1 = "43208b8137d752e4410ccd7305a69d09d88743ec" +deps = ["Adapt", "BandedMatrices", "BlockArrays", "CUDA", "ClimaComms", "CubedSphere", "DataStructures", "DocStringExtensions", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "KrylovKit", "LinearAlgebra", "Memoize", "PkgVersion", "RecursiveArrayTools", "RootSolvers", "SparseArrays", "Static", "StaticArrays", "Statistics", "Unrolled", "WeakValueDicts"] +git-tree-sha1 = "de400c8d487ca34c7a70a92b45e861408a0e7eee" uuid = "d414da3d-4745-48bb-8d80-42e94e092884" -version = "0.11.5" +version = "0.11.6" weakdeps = ["Krylov"] [deps.ClimaCore.extensions] @@ -565,9 +565,9 @@ version = "0.1.0+0" [[deps.DiffEqBase]] deps = ["ArrayInterface", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces"] -git-tree-sha1 = "4aff905c723e3f883064f00a4ba553b29372ce57" +git-tree-sha1 = "09ce9525b590bcdd9a807142dc493692aee85ef9" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.142.0" +version = "6.143.0" [deps.DiffEqBase.extensions] DiffEqBaseChainRulesCoreExt = "ChainRulesCore" @@ -737,10 +737,10 @@ uuid = "c87230d0-a227-11e9-1b43-d7ebe4e7570a" version = "0.4.1" [[deps.FFMPEG_jll]] -deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "JLLWrappers", "LAME_jll", "Libdl", "Ogg_jll", "OpenSSL_jll", "Opus_jll", "PCRE2_jll", "Pkg", "Zlib_jll", "libaom_jll", "libass_jll", "libfdk_aac_jll", "libvorbis_jll", "x264_jll", "x265_jll"] -git-tree-sha1 = "74faea50c1d007c85837327f6775bea60b5492dd" +deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "JLLWrappers", "LAME_jll", "Libdl", "Ogg_jll", "OpenSSL_jll", "Opus_jll", "PCRE2_jll", "Zlib_jll", "libaom_jll", "libass_jll", "libfdk_aac_jll", "libvorbis_jll", "x264_jll", "x265_jll"] +git-tree-sha1 = "466d45dc38e15794ec7d5d63ec03d776a9aff36e" uuid = "b22a6f82-2f65-5046-a5b2-351ab43fb4e5" -version = "4.4.2+2" +version = "4.4.4+1" [[deps.FFTViews]] deps = ["CustomUnitRanges", "FFTW"] @@ -794,9 +794,9 @@ uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee" [[deps.FillArrays]] deps = ["LinearAlgebra", "Random"] -git-tree-sha1 = "25a10f2b86118664293062705fd9c7e2eda881a2" +git-tree-sha1 = "5b93957f6dcd33fc343044af3d48c215be2562f1" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "1.9.2" +version = "1.9.3" weakdeps = ["PDMats", "SparseArrays", "Statistics"] [deps.FillArrays.extensions] @@ -1003,10 +1003,10 @@ weakdeps = ["MPI"] MPIExt = "MPI" [[deps.HDF5_jll]] -deps = ["Artifacts", "JLLWrappers", "LibCURL_jll", "Libdl", "OpenSSL_jll", "Pkg", "Zlib_jll"] -git-tree-sha1 = "4cc2bb72df6ff40b055295fdef6d92955f9dede8" +deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LLVMOpenMP_jll", "LazyArtifacts", "LibCURL_jll", "Libdl", "MPICH_jll", "MPIPreferences", "MPItrampoline_jll", "MicrosoftMPI_jll", "OpenMPI_jll", "OpenSSL_jll", "TOML", "Zlib_jll", "libaec_jll"] +git-tree-sha1 = "38c8874692d48d5440d5752d6c74b0c6b0b60739" uuid = "0234f1f7-429e-5d53-9886-15a909be8d59" -version = "1.12.2+2" +version = "1.14.2+1" [[deps.HTTP]] deps = ["Base64", "CodecZlib", "ConcurrentUtilities", "Dates", "ExceptionUnwrapping", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] @@ -1056,10 +1056,10 @@ uuid = "6a3955dd-da59-5b1f-98d4-e7296123deb5" version = "0.7.6" [[deps.ImageIO]] -deps = ["FileIO", "Netpbm", "PNGFiles"] -git-tree-sha1 = "0d6d09c28d67611c68e25af0c2df7269c82b73c7" +deps = ["FileIO", "IndirectArrays", "JpegTurbo", "LazyModules", "Netpbm", "OpenEXR", "PNGFiles", "QOI", "Sixel", "TiffImages", "UUIDs"] +git-tree-sha1 = "bca20b2f5d00c4fbc192c3212da8fa79f4688009" uuid = "82e4d734-157c-48bb-816b-45c225c6df19" -version = "0.4.1" +version = "0.6.7" [[deps.ImageMetadata]] deps = ["AxisArrays", "ImageAxes", "ImageBase", "ImageCore"] @@ -1067,11 +1067,22 @@ git-tree-sha1 = "355e2b974f2e3212a75dfb60519de21361ad3cb7" uuid = "bc367c6b-8a6b-528e-b4bd-a4b897500b49" version = "0.9.9" +[[deps.Imath_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "3d09a9f60edf77f8a4d99f9e015e8fbf9989605d" +uuid = "905a6f67-0a94-5f89-b386-d35d92009cd1" +version = "3.1.7+0" + [[deps.IndirectArrays]] git-tree-sha1 = "012e604e1c7458645cb8b436f8fba789a51b257f" uuid = "9b13fd28-a010-5f03-acff-a1bbcff69959" version = "1.0.0" +[[deps.Inflate]] +git-tree-sha1 = "ea8031dea4aff6bd41f1df8f2fdfb25b33626381" +uuid = "d25df0c9-e2be-5dd7-82c8-3ad0b3e990b9" +version = "0.1.4" + [[deps.InlineStrings]] deps = ["Parsers"] git-tree-sha1 = "9cc2baf75c6d09f9da536ddf58eb2f29dedaf461" @@ -1183,6 +1194,12 @@ git-tree-sha1 = "31e996f0a15c7b280ba9f76636b3ff9e2ae58c9a" uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6" version = "0.21.4" +[[deps.JpegTurbo]] +deps = ["CEnum", "FileIO", "ImageCore", "JpegTurbo_jll", "TOML"] +git-tree-sha1 = "fa6d0bcff8583bac20f1ffa708c3913ca605c611" +uuid = "b835a17e-a41a-41e7-81f0-2f016b05efe0" +version = "0.1.5" + [[deps.JpegTurbo_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] git-tree-sha1 = "60b1194df0a3298f460063de985eae7b01bc011a" @@ -1321,6 +1338,11 @@ version = "0.15.1" deps = ["Artifacts", "Pkg"] uuid = "4af54fe1-eca0-43a8-85a7-787d91b784e3" +[[deps.LazyModules]] +git-tree-sha1 = "a560dd966b386ac9ae60bdd3a3d3a326062d3c3e" +uuid = "8cdb02fc-e678-4876-92c5-9defec4f444e" +version = "0.3.1" + [[deps.LibCURL]] deps = ["LibCURL_jll", "MozillaCACerts_jll"] uuid = "b27032c2-a3e7-50c8-80cd-2d36dbcbfd21" @@ -1635,10 +1657,10 @@ uuid = "77ba4419-2d1f-58cd-9bb1-8ffee604a2e3" version = "1.0.2" [[deps.NetCDF_jll]] -deps = ["Artifacts", "HDF5_jll", "JLLWrappers", "LibCURL_jll", "Libdl", "Pkg", "XML2_jll", "Zlib_jll"] -git-tree-sha1 = "072f8371f74c3b9e1b26679de7fbf059d45ea221" +deps = ["Artifacts", "Bzip2_jll", "HDF5_jll", "JLLWrappers", "LibCURL_jll", "Libdl", "XML2_jll", "Zlib_jll", "Zstd_jll"] +git-tree-sha1 = "10c612c81eaffdd6b7c28a45a554cdd9d2f40ff1" uuid = "7243133f-43d8-5620-bbf4-c2c921802cf3" -version = "400.902.5+1" +version = "400.902.208+0" [[deps.Netpbm]] deps = ["FileIO", "ImageCore", "ImageMetadata"] @@ -1678,6 +1700,18 @@ deps = ["Artifacts", "CompilerSupportLibraries_jll", "Libdl"] uuid = "4536629a-c528-5b80-bd46-f80d51c5b363" version = "0.3.21+4" +[[deps.OpenEXR]] +deps = ["Colors", "FileIO", "OpenEXR_jll"] +git-tree-sha1 = "327f53360fdb54df7ecd01e96ef1983536d1e633" +uuid = "52e1d378-f018-4a11-a4be-720524705ac7" +version = "0.3.2" + +[[deps.OpenEXR_jll]] +deps = ["Artifacts", "Imath_jll", "JLLWrappers", "Libdl", "Zlib_jll"] +git-tree-sha1 = "a4ca623df1ae99d09bc9868b008262d0c0ac1e4f" +uuid = "18a262bb-aa17-5467-a713-aee519bc75cb" +version = "3.1.4+0" + [[deps.OpenLibm_jll]] deps = ["Artifacts", "Libdl"] uuid = "05823500-19ac-5b8b-9628-191a04bc5112" @@ -1697,9 +1731,9 @@ version = "1.4.1" [[deps.OpenSSL_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "a12e56c72edee3ce6b96667745e6cbbe5498f200" +git-tree-sha1 = "cc6e1927ac521b659af340e0ca45828a3ffc748f" uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95" -version = "1.1.23+0" +version = "3.0.12+0" [[deps.OpenSpecFun_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] @@ -1737,9 +1771,9 @@ version = "0.11.31" [[deps.PNGFiles]] deps = ["Base64", "CEnum", "ImageCore", "IndirectArrays", "OffsetArrays", "libpng_jll"] -git-tree-sha1 = "f809158b27eba0c18c269cf2a2be6ed751d3e81d" +git-tree-sha1 = "67186a2bc9a90f9f85ff3cc8277868961fb57cbd" uuid = "f57f5aa1-a3ce-4bc8-8ab9-96f992907883" -version = "0.3.17" +version = "0.4.3" [[deps.Packing]] deps = ["GeometryBasics"] @@ -1940,11 +1974,23 @@ git-tree-sha1 = "80d919dee55b9c50e8d9e2da5eeafff3fe58b539" uuid = "33c8b6b6-d38a-422a-b730-caa89a2f386c" version = "0.1.4" +[[deps.ProgressMeter]] +deps = ["Distributed", "Printf"] +git-tree-sha1 = "00099623ffee15972c16111bcf84c58a0051257c" +uuid = "92933f4c-e287-5a05-a399-4b506db050ca" +version = "1.9.0" + +[[deps.QOI]] +deps = ["ColorTypes", "FileIO", "FixedPointNumbers"] +git-tree-sha1 = "18e8f4d1426e965c7b532ddd260599e1510d26ce" +uuid = "4b34888f-f399-49d4-9bb3-47ed5cae4e65" +version = "1.0.0" + [[deps.Qt6Base_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "Fontconfig_jll", "Glib_jll", "JLLWrappers", "Libdl", "Libglvnd_jll", "OpenSSL_jll", "Vulkan_Loader_jll", "Xorg_libSM_jll", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Xorg_libxcb_jll", "Xorg_xcb_util_cursor_jll", "Xorg_xcb_util_image_jll", "Xorg_xcb_util_keysyms_jll", "Xorg_xcb_util_renderutil_jll", "Xorg_xcb_util_wm_jll", "Zlib_jll", "libinput_jll", "xkbcommon_jll"] -git-tree-sha1 = "7c29f0e8c575428bd84dc3c72ece5178caa67336" +git-tree-sha1 = "37b7bb7aabf9a085e0044307e1717436117f2b3b" uuid = "c0090381-4147-56d7-9ebc-da0b1113ec56" -version = "6.5.2+2" +version = "6.5.3+1" [[deps.QuadGK]] deps = ["DataStructures", "LinearAlgebra"] @@ -2212,6 +2258,12 @@ git-tree-sha1 = "5d7e3f4e11935503d3ecaf7186eac40602e7d231" uuid = "699a6c99-e7fa-54fc-8d76-47d257e15c1d" version = "0.9.4" +[[deps.Sixel]] +deps = ["Dates", "FileIO", "ImageCore", "IndirectArrays", "OffsetArrays", "REPL", "libsixel_jll"] +git-tree-sha1 = "2da10356e31327c7096832eb9cd86307a50b1eb6" +uuid = "45858cf5-a6b0-47a3-bbea-62219f50df47" +version = "0.1.3" + [[deps.Sobol]] deps = ["DelimitedFiles", "Random"] git-tree-sha1 = "5a74ac22a9daef23705f010f72c81d6925b19df8" @@ -2261,9 +2313,9 @@ version = "0.8.8" [[deps.StaticArrayInterface]] deps = ["ArrayInterface", "Compat", "IfElse", "LinearAlgebra", "PrecompileTools", "Requires", "SparseArrays", "Static", "SuiteSparse"] -git-tree-sha1 = "03fec6800a986d191f64f5c0996b59ed526eda25" +git-tree-sha1 = "5d66818a39bb04bf328e92bc933ec5b4ee88e436" uuid = "0d7ed370-da01-4f52-bd93-41d350b8b718" -version = "1.4.1" +version = "1.5.0" weakdeps = ["OffsetArrays", "StaticArrays"] [deps.StaticArrayInterface.extensions] @@ -2391,10 +2443,10 @@ weakdeps = ["IntervalArithmetic"] TaylorSeriesIAExt = "IntervalArithmetic" [[deps.TempestRemap_jll]] -deps = ["Artifacts", "HDF5_jll", "JLLWrappers", "Libdl", "NetCDF_jll", "OpenBLAS32_jll", "Pkg"] -git-tree-sha1 = "88c3818a492ad1a94b1aa440b01eab5d133209ff" +deps = ["Artifacts", "HDF5_jll", "JLLWrappers", "Libdl", "NetCDF_jll", "OpenBLAS32_jll"] +git-tree-sha1 = "723112218783928a20e0d865932694acfb7a7571" uuid = "8573a8c5-1df0-515e-a024-abad257ee284" -version = "2.1.6+1" +version = "2.2.0+0" [[deps.TensorCore]] deps = ["LinearAlgebra"] @@ -2423,6 +2475,12 @@ git-tree-sha1 = "eda08f7e9818eb53661b3deb74e3159460dfbc27" uuid = "8290d209-cae3-49c0-8002-c8c24d57dab5" version = "0.5.2" +[[deps.TiffImages]] +deps = ["ColorTypes", "DataStructures", "DocStringExtensions", "FileIO", "FixedPointNumbers", "IndirectArrays", "Inflate", "Mmap", "OffsetArrays", "PkgVersion", "ProgressMeter", "UUIDs"] +git-tree-sha1 = "34cc045dd0aaa59b8bbe86c644679bc57f1d5bd0" +uuid = "731e570b-9d59-4bfa-96dc-6df516fadf69" +version = "0.6.8" + [[deps.TiledIteration]] deps = ["OffsetArrays", "StaticArrayInterface"] git-tree-sha1 = "1176cc31e867217b06928e2f140c90bd1bc88283" @@ -2502,6 +2560,12 @@ git-tree-sha1 = "e2d817cc500e960fdbafcf988ac8436ba3208bfd" uuid = "45397f5d-5981-4c77-b2b3-fc36d6e9b728" version = "1.6.3" +[[deps.Unrolled]] +deps = ["MacroTools"] +git-tree-sha1 = "6cc9d682755680e0f0be87c56392b7651efc2c7b" +uuid = "9602ed7d-8fef-5bc8-8597-8f21381861e8" +version = "0.1.5" + [[deps.UnsafeAtomics]] git-tree-sha1 = "6331ac3440856ea1988316b46045303bef658278" uuid = "013be700-e6cd-48c3-b4a1-df204f14c38f" @@ -2761,6 +2825,12 @@ git-tree-sha1 = "51b5eeb3f98367157a7a12a1fb0aa5328946c03c" uuid = "9a68df92-36a6-505f-a73e-abb412b6bfb4" version = "0.2.3+0" +[[deps.libaec_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "eddd19a8dea6b139ea97bdc8a0e2667d4b661720" +uuid = "477f73a3-ac25-53e9-8cc3-50b2fa2566f0" +version = "1.0.6+1" + [[deps.libaom_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] git-tree-sha1 = "3a2ea60308f0996d26f1e5354e10c24e9ef905d4" @@ -2802,6 +2872,12 @@ git-tree-sha1 = "93284c28274d9e75218a416c65ec49d0e0fcdf3d" uuid = "b53b4c65-9356-5827-b1ea-8c7a1a84506f" version = "1.6.40+0" +[[deps.libsixel_jll]] +deps = ["Artifacts", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Pkg", "libpng_jll"] +git-tree-sha1 = "d4f63314c8aa1e48cd22aa0c17ed76cd1ae48c3c" +uuid = "075b6546-f08a-558a-be8f-8157d0f608a5" +version = "1.10.3+0" + [[deps.libvorbis_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Ogg_jll", "Pkg"] git-tree-sha1 = "b910cb81ef3fe6e78bf6acee440bda86fd6ae00c" diff --git a/examples/Project.toml b/examples/Project.toml index 599405537f8..db09158af40 100644 --- a/examples/Project.toml +++ b/examples/Project.toml @@ -72,6 +72,7 @@ ClimaCoreVTK = "0.7" CloudMicrophysics = "0.15" ForwardDiff = "0.10" Glob = "1" +HDF5_jll = "1.14" JET = "0.7, 0.8" JSON = "0.21" NCRegressionTests = "0.2" @@ -87,3 +88,4 @@ julia = "1.7" [extras] CPUSummary = "2a0fbf3d-bb9c-48f3-b0a9-814d99fd7ab9" +HDF5_jll = "0234f1f7-429e-5d53-9886-15a909be8d59" diff --git a/perf/Manifest.toml b/perf/Manifest.toml index 1111fadab50..cbfffbbcede 100644 --- a/perf/Manifest.toml +++ b/perf/Manifest.toml @@ -325,10 +325,10 @@ uuid = "3a4d1b5c-c61d-41fd-a00a-5873ba7a1b0d" version = "0.5.6" [[deps.ClimaCore]] -deps = ["Adapt", "BandedMatrices", "BlockArrays", "CUDA", "ClimaComms", "CubedSphere", "DataStructures", "DocStringExtensions", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "KrylovKit", "LinearAlgebra", "Memoize", "PkgVersion", "RecursiveArrayTools", "RootSolvers", "SparseArrays", "Static", "StaticArrays", "Statistics", "WeakValueDicts"] -git-tree-sha1 = "43208b8137d752e4410ccd7305a69d09d88743ec" +deps = ["Adapt", "BandedMatrices", "BlockArrays", "CUDA", "ClimaComms", "CubedSphere", "DataStructures", "DocStringExtensions", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "KrylovKit", "LinearAlgebra", "Memoize", "PkgVersion", "RecursiveArrayTools", "RootSolvers", "SparseArrays", "Static", "StaticArrays", "Statistics", "Unrolled", "WeakValueDicts"] +git-tree-sha1 = "de400c8d487ca34c7a70a92b45e861408a0e7eee" uuid = "d414da3d-4745-48bb-8d80-42e94e092884" -version = "0.11.5" +version = "0.11.6" weakdeps = ["Krylov"] [deps.ClimaCore.extensions] @@ -582,9 +582,9 @@ version = "0.1.0+0" [[deps.DiffEqBase]] deps = ["ArrayInterface", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces"] -git-tree-sha1 = "4aff905c723e3f883064f00a4ba553b29372ce57" +git-tree-sha1 = "09ce9525b590bcdd9a807142dc493692aee85ef9" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.142.0" +version = "6.143.0" [deps.DiffEqBase.extensions] DiffEqBaseChainRulesCoreExt = "ChainRulesCore" @@ -766,10 +766,10 @@ uuid = "c87230d0-a227-11e9-1b43-d7ebe4e7570a" version = "0.4.1" [[deps.FFMPEG_jll]] -deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "JLLWrappers", "LAME_jll", "Libdl", "Ogg_jll", "OpenSSL_jll", "Opus_jll", "PCRE2_jll", "Pkg", "Zlib_jll", "libaom_jll", "libass_jll", "libfdk_aac_jll", "libvorbis_jll", "x264_jll", "x265_jll"] -git-tree-sha1 = "74faea50c1d007c85837327f6775bea60b5492dd" +deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "JLLWrappers", "LAME_jll", "Libdl", "Ogg_jll", "OpenSSL_jll", "Opus_jll", "PCRE2_jll", "Zlib_jll", "libaom_jll", "libass_jll", "libfdk_aac_jll", "libvorbis_jll", "x264_jll", "x265_jll"] +git-tree-sha1 = "466d45dc38e15794ec7d5d63ec03d776a9aff36e" uuid = "b22a6f82-2f65-5046-a5b2-351ab43fb4e5" -version = "4.4.2+2" +version = "4.4.4+1" [[deps.FFTViews]] deps = ["CustomUnitRanges", "FFTW"] @@ -823,9 +823,9 @@ uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee" [[deps.FillArrays]] deps = ["LinearAlgebra", "Random"] -git-tree-sha1 = "25a10f2b86118664293062705fd9c7e2eda881a2" +git-tree-sha1 = "5b93957f6dcd33fc343044af3d48c215be2562f1" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "1.9.2" +version = "1.9.3" weakdeps = ["PDMats", "SparseArrays", "Statistics"] [deps.FillArrays.extensions] @@ -1050,10 +1050,10 @@ weakdeps = ["MPI"] MPIExt = "MPI" [[deps.HDF5_jll]] -deps = ["Artifacts", "JLLWrappers", "LibCURL_jll", "Libdl", "OpenSSL_jll", "Pkg", "Zlib_jll"] -git-tree-sha1 = "4cc2bb72df6ff40b055295fdef6d92955f9dede8" +deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LLVMOpenMP_jll", "LazyArtifacts", "LibCURL_jll", "Libdl", "MPICH_jll", "MPIPreferences", "MPItrampoline_jll", "MicrosoftMPI_jll", "OpenMPI_jll", "OpenSSL_jll", "TOML", "Zlib_jll", "libaec_jll"] +git-tree-sha1 = "38c8874692d48d5440d5752d6c74b0c6b0b60739" uuid = "0234f1f7-429e-5d53-9886-15a909be8d59" -version = "1.12.2+2" +version = "1.14.2+1" [[deps.HTTP]] deps = ["Base64", "CodecZlib", "ConcurrentUtilities", "Dates", "ExceptionUnwrapping", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] @@ -1103,10 +1103,10 @@ uuid = "6a3955dd-da59-5b1f-98d4-e7296123deb5" version = "0.7.6" [[deps.ImageIO]] -deps = ["FileIO", "Netpbm", "PNGFiles"] -git-tree-sha1 = "0d6d09c28d67611c68e25af0c2df7269c82b73c7" +deps = ["FileIO", "IndirectArrays", "JpegTurbo", "LazyModules", "Netpbm", "OpenEXR", "PNGFiles", "QOI", "Sixel", "TiffImages", "UUIDs"] +git-tree-sha1 = "bca20b2f5d00c4fbc192c3212da8fa79f4688009" uuid = "82e4d734-157c-48bb-816b-45c225c6df19" -version = "0.4.1" +version = "0.6.7" [[deps.ImageMetadata]] deps = ["AxisArrays", "ImageAxes", "ImageBase", "ImageCore"] @@ -1114,11 +1114,22 @@ git-tree-sha1 = "355e2b974f2e3212a75dfb60519de21361ad3cb7" uuid = "bc367c6b-8a6b-528e-b4bd-a4b897500b49" version = "0.9.9" +[[deps.Imath_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "3d09a9f60edf77f8a4d99f9e015e8fbf9989605d" +uuid = "905a6f67-0a94-5f89-b386-d35d92009cd1" +version = "3.1.7+0" + [[deps.IndirectArrays]] git-tree-sha1 = "012e604e1c7458645cb8b436f8fba789a51b257f" uuid = "9b13fd28-a010-5f03-acff-a1bbcff69959" version = "1.0.0" +[[deps.Inflate]] +git-tree-sha1 = "ea8031dea4aff6bd41f1df8f2fdfb25b33626381" +uuid = "d25df0c9-e2be-5dd7-82c8-3ad0b3e990b9" +version = "0.1.4" + [[deps.InlineStrings]] deps = ["Parsers"] git-tree-sha1 = "9cc2baf75c6d09f9da536ddf58eb2f29dedaf461" @@ -1230,6 +1241,12 @@ git-tree-sha1 = "31e996f0a15c7b280ba9f76636b3ff9e2ae58c9a" uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6" version = "0.21.4" +[[deps.JpegTurbo]] +deps = ["CEnum", "FileIO", "ImageCore", "JpegTurbo_jll", "TOML"] +git-tree-sha1 = "fa6d0bcff8583bac20f1ffa708c3913ca605c611" +uuid = "b835a17e-a41a-41e7-81f0-2f016b05efe0" +version = "0.1.5" + [[deps.JpegTurbo_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] git-tree-sha1 = "60b1194df0a3298f460063de985eae7b01bc011a" @@ -1373,6 +1390,11 @@ version = "0.15.1" deps = ["Artifacts", "Pkg"] uuid = "4af54fe1-eca0-43a8-85a7-787d91b784e3" +[[deps.LazyModules]] +git-tree-sha1 = "a560dd966b386ac9ae60bdd3a3d3a326062d3c3e" +uuid = "8cdb02fc-e678-4876-92c5-9defec4f444e" +version = "0.3.1" + [[deps.LeftChildRightSiblingTrees]] deps = ["AbstractTrees"] git-tree-sha1 = "fb6803dafae4a5d62ea5cab204b1e657d9737e7f" @@ -1687,10 +1709,10 @@ uuid = "77ba4419-2d1f-58cd-9bb1-8ffee604a2e3" version = "1.0.2" [[deps.NetCDF_jll]] -deps = ["Artifacts", "HDF5_jll", "JLLWrappers", "LibCURL_jll", "Libdl", "Pkg", "XML2_jll", "Zlib_jll"] -git-tree-sha1 = "072f8371f74c3b9e1b26679de7fbf059d45ea221" +deps = ["Artifacts", "Bzip2_jll", "HDF5_jll", "JLLWrappers", "LibCURL_jll", "Libdl", "XML2_jll", "Zlib_jll", "Zstd_jll"] +git-tree-sha1 = "10c612c81eaffdd6b7c28a45a554cdd9d2f40ff1" uuid = "7243133f-43d8-5620-bbf4-c2c921802cf3" -version = "400.902.5+1" +version = "400.902.208+0" [[deps.Netpbm]] deps = ["FileIO", "ImageCore", "ImageMetadata"] @@ -1730,6 +1752,18 @@ deps = ["Artifacts", "CompilerSupportLibraries_jll", "Libdl"] uuid = "4536629a-c528-5b80-bd46-f80d51c5b363" version = "0.3.21+4" +[[deps.OpenEXR]] +deps = ["Colors", "FileIO", "OpenEXR_jll"] +git-tree-sha1 = "327f53360fdb54df7ecd01e96ef1983536d1e633" +uuid = "52e1d378-f018-4a11-a4be-720524705ac7" +version = "0.3.2" + +[[deps.OpenEXR_jll]] +deps = ["Artifacts", "Imath_jll", "JLLWrappers", "Libdl", "Zlib_jll"] +git-tree-sha1 = "a4ca623df1ae99d09bc9868b008262d0c0ac1e4f" +uuid = "18a262bb-aa17-5467-a713-aee519bc75cb" +version = "3.1.4+0" + [[deps.OpenLibm_jll]] deps = ["Artifacts", "Libdl"] uuid = "05823500-19ac-5b8b-9628-191a04bc5112" @@ -1749,9 +1783,9 @@ version = "1.4.1" [[deps.OpenSSL_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "a12e56c72edee3ce6b96667745e6cbbe5498f200" +git-tree-sha1 = "cc6e1927ac521b659af340e0ca45828a3ffc748f" uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95" -version = "1.1.23+0" +version = "3.0.12+0" [[deps.OpenSpecFun_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] @@ -1789,9 +1823,9 @@ version = "0.11.31" [[deps.PNGFiles]] deps = ["Base64", "CEnum", "ImageCore", "IndirectArrays", "OffsetArrays", "libpng_jll"] -git-tree-sha1 = "f809158b27eba0c18c269cf2a2be6ed751d3e81d" +git-tree-sha1 = "67186a2bc9a90f9f85ff3cc8277868961fb57cbd" uuid = "f57f5aa1-a3ce-4bc8-8ab9-96f992907883" -version = "0.3.17" +version = "0.4.3" [[deps.PProf]] deps = ["AbstractTrees", "EnumX", "FlameGraphs", "Libdl", "OrderedCollections", "Profile", "ProgressMeter", "ProtoBuf", "pprof_jll"] @@ -2016,11 +2050,17 @@ git-tree-sha1 = "dc85dc33abde04b3c2f687834a5551994b27c328" uuid = "3349acd9-ac6a-5e09-bcdb-63829b23a429" version = "1.0.14" +[[deps.QOI]] +deps = ["ColorTypes", "FileIO", "FixedPointNumbers"] +git-tree-sha1 = "18e8f4d1426e965c7b532ddd260599e1510d26ce" +uuid = "4b34888f-f399-49d4-9bb3-47ed5cae4e65" +version = "1.0.0" + [[deps.Qt6Base_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "Fontconfig_jll", "Glib_jll", "JLLWrappers", "Libdl", "Libglvnd_jll", "OpenSSL_jll", "Vulkan_Loader_jll", "Xorg_libSM_jll", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Xorg_libxcb_jll", "Xorg_xcb_util_cursor_jll", "Xorg_xcb_util_image_jll", "Xorg_xcb_util_keysyms_jll", "Xorg_xcb_util_renderutil_jll", "Xorg_xcb_util_wm_jll", "Zlib_jll", "libinput_jll", "xkbcommon_jll"] -git-tree-sha1 = "7c29f0e8c575428bd84dc3c72ece5178caa67336" +git-tree-sha1 = "37b7bb7aabf9a085e0044307e1717436117f2b3b" uuid = "c0090381-4147-56d7-9ebc-da0b1113ec56" -version = "6.5.2+2" +version = "6.5.3+1" [[deps.QuadGK]] deps = ["DataStructures", "LinearAlgebra"] @@ -2294,6 +2334,12 @@ git-tree-sha1 = "5d7e3f4e11935503d3ecaf7186eac40602e7d231" uuid = "699a6c99-e7fa-54fc-8d76-47d257e15c1d" version = "0.9.4" +[[deps.Sixel]] +deps = ["Dates", "FileIO", "ImageCore", "IndirectArrays", "OffsetArrays", "REPL", "libsixel_jll"] +git-tree-sha1 = "2da10356e31327c7096832eb9cd86307a50b1eb6" +uuid = "45858cf5-a6b0-47a3-bbea-62219f50df47" +version = "0.1.3" + [[deps.SnoopCompile]] deps = ["AbstractTrees", "Cthulhu", "FlameGraphs", "InteractiveUtils", "JET", "OrderedCollections", "Pkg", "Printf", "Profile", "Requires", "Serialization", "SnoopCompileCore", "YAML"] git-tree-sha1 = "894e542ef8553c82ead28171e6c144d0fb492563" @@ -2355,9 +2401,9 @@ version = "0.8.8" [[deps.StaticArrayInterface]] deps = ["ArrayInterface", "Compat", "IfElse", "LinearAlgebra", "PrecompileTools", "Requires", "SparseArrays", "Static", "SuiteSparse"] -git-tree-sha1 = "03fec6800a986d191f64f5c0996b59ed526eda25" +git-tree-sha1 = "5d66818a39bb04bf328e92bc933ec5b4ee88e436" uuid = "0d7ed370-da01-4f52-bd93-41d350b8b718" -version = "1.4.1" +version = "1.5.0" weakdeps = ["OffsetArrays", "StaticArrays"] [deps.StaticArrayInterface.extensions] @@ -2485,10 +2531,10 @@ weakdeps = ["IntervalArithmetic"] TaylorSeriesIAExt = "IntervalArithmetic" [[deps.TempestRemap_jll]] -deps = ["Artifacts", "HDF5_jll", "JLLWrappers", "Libdl", "NetCDF_jll", "OpenBLAS32_jll", "Pkg"] -git-tree-sha1 = "88c3818a492ad1a94b1aa440b01eab5d133209ff" +deps = ["Artifacts", "HDF5_jll", "JLLWrappers", "Libdl", "NetCDF_jll", "OpenBLAS32_jll"] +git-tree-sha1 = "723112218783928a20e0d865932694acfb7a7571" uuid = "8573a8c5-1df0-515e-a024-abad257ee284" -version = "2.1.6+1" +version = "2.2.0+0" [[deps.TensorCore]] deps = ["LinearAlgebra"] @@ -2517,6 +2563,12 @@ git-tree-sha1 = "eda08f7e9818eb53661b3deb74e3159460dfbc27" uuid = "8290d209-cae3-49c0-8002-c8c24d57dab5" version = "0.5.2" +[[deps.TiffImages]] +deps = ["ColorTypes", "DataStructures", "DocStringExtensions", "FileIO", "FixedPointNumbers", "IndirectArrays", "Inflate", "Mmap", "OffsetArrays", "PkgVersion", "ProgressMeter", "UUIDs"] +git-tree-sha1 = "34cc045dd0aaa59b8bbe86c644679bc57f1d5bd0" +uuid = "731e570b-9d59-4bfa-96dc-6df516fadf69" +version = "0.6.8" + [[deps.TiledIteration]] deps = ["OffsetArrays", "StaticArrayInterface"] git-tree-sha1 = "1176cc31e867217b06928e2f140c90bd1bc88283" @@ -2602,6 +2654,12 @@ git-tree-sha1 = "e2d817cc500e960fdbafcf988ac8436ba3208bfd" uuid = "45397f5d-5981-4c77-b2b3-fc36d6e9b728" version = "1.6.3" +[[deps.Unrolled]] +deps = ["MacroTools"] +git-tree-sha1 = "6cc9d682755680e0f0be87c56392b7651efc2c7b" +uuid = "9602ed7d-8fef-5bc8-8597-8f21381861e8" +version = "0.1.5" + [[deps.UnsafeAtomics]] git-tree-sha1 = "6331ac3440856ea1988316b46045303bef658278" uuid = "013be700-e6cd-48c3-b4a1-df204f14c38f" @@ -2867,6 +2925,12 @@ git-tree-sha1 = "51b5eeb3f98367157a7a12a1fb0aa5328946c03c" uuid = "9a68df92-36a6-505f-a73e-abb412b6bfb4" version = "0.2.3+0" +[[deps.libaec_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "eddd19a8dea6b139ea97bdc8a0e2667d4b661720" +uuid = "477f73a3-ac25-53e9-8cc3-50b2fa2566f0" +version = "1.0.6+1" + [[deps.libaom_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] git-tree-sha1 = "3a2ea60308f0996d26f1e5354e10c24e9ef905d4" @@ -2908,6 +2972,12 @@ git-tree-sha1 = "93284c28274d9e75218a416c65ec49d0e0fcdf3d" uuid = "b53b4c65-9356-5827-b1ea-8c7a1a84506f" version = "1.6.40+0" +[[deps.libsixel_jll]] +deps = ["Artifacts", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Pkg", "libpng_jll"] +git-tree-sha1 = "d4f63314c8aa1e48cd22aa0c17ed76cd1ae48c3c" +uuid = "075b6546-f08a-558a-be8f-8157d0f608a5" +version = "1.10.3+0" + [[deps.libvorbis_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Ogg_jll", "Pkg"] git-tree-sha1 = "b910cb81ef3fe6e78bf6acee440bda86fd6ae00c"