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RunDeepProfiler doesn't run in analysis mode on Windows, only on mac #208
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Based on @bethac07 suggestion, I tried to remove the callback from the subprocess and simply call When I press Stop analysis, it saves the outputs and does everything even the feature extraction, but just for Worker 1 and only after I press Stop (see log).
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Hi Can you please give more details on how to install depprofiler as a plugin for CellProfiler? |
@jamila-griffith Installation instructions for supported CellProfiler-plugins are here. |
Probably related to #19
So far RunDeepProfiler only ran on Windows using the test mode. On Mac, it works fine on both test and analysis modes and outputs the extracted features into the object's table using the ExportToSpreadsheet module, as shown in the screenshots below.
Probably the RunDeepProfiler inside docker will avoid this issue; yet to be tested.
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