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MAT model not loading #11

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HettieC opened this issue Sep 9, 2024 · 2 comments
Closed

MAT model not loading #11

HettieC opened this issue Sep 9, 2024 · 2 comments

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@HettieC
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HettieC commented Sep 9, 2024

Hello! Realised my COBREXA issue should have been directly here...

I'm trying to load a MAT model, and am getting an InexactError: Int64(NaN) resulting from some of the metabolite charges in the model being NaN.

The model I am using is the yeast-GEM.mat from here.

Looks like the util parse_charge(x) just needs an extra case for NaN.

Thanks!

@exaexa
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exaexa commented Sep 9, 2024

hello! Just a quick check, are you sure you're on the latest verison? I thought I already fixed this here https://github.com/COBREXA/MATFBCModels.jl/pull/9/files#diff-47c27891e951c8cd946b850dc2df31082624afdf57446c21cb6992f5f4b74aa2R33 which was actually the last time you've reported the yeast gem problems.

If it's still not fixed please let me know.

For the package versions you can do ]status or possibly ]update or something

@HettieC
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HettieC commented Sep 9, 2024

No I forgot to update the version... thanks!!

@HettieC HettieC closed this as completed Sep 9, 2024
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