From ff8500df3e1ae86483622e4de06a9915a456179c Mon Sep 17 00:00:00 2001
From: martin-raden <mmann@informatik.uni-freiburg.de>
Date: Mon, 29 Apr 2024 16:27:14 +0200
Subject: [PATCH] cleanup

---
 src/IntaRNA/Interaction.cpp | 1 +
 src/IntaRNA/Interaction.h   | 6 +++---
 2 files changed, 4 insertions(+), 3 deletions(-)

diff --git a/src/IntaRNA/Interaction.cpp b/src/IntaRNA/Interaction.cpp
index 07d1dc5..f043cd4 100644
--- a/src/IntaRNA/Interaction.cpp
+++ b/src/IntaRNA/Interaction.cpp
@@ -30,6 +30,7 @@ std::ostream&
 operator<<(std::ostream& out, const Interaction::Boundary& b)
 {
 	out <<"("<<b.i1<<":"<<b.i2<<")-("<<b.j1<<","<<b.j2<<")";
+//	out <<"("<<b.i1<<","<<b.j1<<","<<b.i2<<","<<b.j2<<")";
 	return out;
 }
 
diff --git a/src/IntaRNA/Interaction.h b/src/IntaRNA/Interaction.h
index 98bac21..4865fd1 100644
--- a/src/IntaRNA/Interaction.h
+++ b/src/IntaRNA/Interaction.h
@@ -306,12 +306,12 @@ class Interaction {
 	compareEnergy( const E_type& energy, const Interaction & hasLargerE );
 
 	/**
-	 * Prints the interacting base pair to stream
+	 * Prints the interaction boundary to stream
 	 * @param out the ostream to write to
-	 * @param bp the Interaction base pair object to add
+	 * @param b the Boundary object to add
 	 * @return the altered stream out
 	 */
-	friend std::ostream& operator<<(std::ostream& out, const BasePair& bp);
+	friend std::ostream& operator<<(std::ostream& out, const Boundary& b);
 
 	/**
 	 * Prints the interacting boundary to stream