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UMI-based variant calling #374

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andreakv93 opened this issue Dec 19, 2022 · 0 comments
Open

UMI-based variant calling #374

andreakv93 opened this issue Dec 19, 2022 · 0 comments

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@andreakv93
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Thank you for providing the VarDict software.

My question is: does the tool perform variant calling using UMIs as well? If yes, what parameters do I need to set in order to run VarDict in reads with extracted UMIs? (extracted UMI sequences are found on the read name)

Thank you,
Andrea

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